BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0127.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773092.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicu... 573 e-161 ref|YP_001206331.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 551 e-155 ref|YP_001239315.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 532 e-149 ref|YP_918770.1| acyl-CoA dehydrogenase type 2 [Paracoccus denit... 394 e-107 ref|ZP_07677499.1| acyl-CoA dehydrogenase family protein [Ralsto... 387 e-105 >ref|NP_773092.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC51717.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 390 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 303/390 (77%), Positives = 338/390 (86%), Gaps = 3/390 (0%) Query: 1 MVTSAARELPPANAPEHIARALRLAEVFAARAPAHDRDASFPFENFADLSREGLLALTVP 60 MVTS A+ + +++ARA LAE FAARA HDR SFPF+NF +LS GLL+LTVP Sbjct: 1 MVTSIAKGRLAHSERDYVARAEALAEAFAARAAEHDRTGSFPFKNFRELSEAGLLSLTVP 60 Query: 61 AALGGGEGDAI---RVLGIIGKADPSTALVLSMHYIQHLVMARSTRWPARLSRKLAKETV 117 AA GGG A RV+GIIGKADPSTALVLSMHYI HLVMARS WPARLSRKLA+E+V Sbjct: 61 AAHGGGGAGARYAARVIGIIGKADPSTALVLSMHYINHLVMARSPTWPARLSRKLARESV 120 Query: 118 EGVALINALRVEPELGSPARGGLPASTARRTETGWRLTGKKIYSTGAPILKWYSVWAKTD 177 EG+AL+NALRVEPELGSPARGGLPA+ ARRTETGWRLTG KIYSTG+PILKWY VWA+TD Sbjct: 121 EGLALVNALRVEPELGSPARGGLPATIARRTETGWRLTGHKIYSTGSPILKWYLVWARTD 180 Query: 178 EPETRVGLFLVPAGLPGTRIEETWDHLGLRASGSHTVIFDDVVFPLDYEIDVRRPDEWKV 237 E E RVG FLVPAGLPGTRI ETWDH GLRASGSH VIFDDVV PLD E+DVR+P +W+ Sbjct: 181 EAEPRVGQFLVPAGLPGTRIVETWDHHGLRASGSHDVIFDDVVIPLDSEVDVRKPTDWRG 240 Query: 238 PDVTQATVHAIFVAAIYDGIARAARDWLITFLKERVPANLGAPLATLPRMQEVVGAIEAR 297 PDVTQATVHAIFVAAIYDG+ARAARDWLI+FLK+RVPA+LGAPLATLPR QE++GA+EAR Sbjct: 241 PDVTQATVHAIFVAAIYDGVARAARDWLISFLKQRVPASLGAPLATLPRAQEILGAVEAR 300 Query: 298 LAVNARLIDSFAADFDNGFQLSAIESNIIKLTVTNNAAAVVEDALSLTSNHGLSRTNPLE 357 LAVNARLI SFA DFD+G +LSA ESN+IKLTVTNNA A VEDALSLT NHGLSRTNPLE Sbjct: 301 LAVNARLIASFADDFDDGVELSAAESNVIKLTVTNNAVAAVEDALSLTGNHGLSRTNPLE 360 Query: 358 RHFRDVLCGRVHTPQDDATRVSAGRSALGV 387 RH+RDVLCGRVHTPQDD+TR+ GR+ALG+ Sbjct: 361 RHYRDVLCGRVHTPQDDSTRIGLGRAALGL 390 >ref|YP_001206331.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL78108.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 394 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 278/386 (72%), Positives = 317/386 (82%), Gaps = 3/386 (0%) Query: 5 AARELPPANAPEHIARALRLAEVFAARAPAHDRDASFPFENFADLSREGLLALTVPAALG 64 A R+ N E IARALRL VFA RAPAHDRD SFPF+NF DL GLL+LTVP ALG Sbjct: 9 APRQNDKENEDELIARALRLVPVFAERAPAHDRDRSFPFQNFKDLFEAGLLSLTVPTALG 68 Query: 65 GGEGDAI---RVLGIIGKADPSTALVLSMHYIQHLVMARSTRWPARLSRKLAKETVEGVA 121 G A RVLGII +ADPSTALVL+MHYIQH VMAR+ +P RL+RKL +E+VE A Sbjct: 69 GHGAGAGLTSRVLGIIAEADPSTALVLAMHYIQHFVMARNQEYPPRLARKLQRESVERGA 128 Query: 122 LINALRVEPELGSPARGGLPASTARRTETGWRLTGKKIYSTGAPILKWYSVWAKTDEPET 181 LIN RVEP LGSP+RGGLP + ARRTETGWRL+G KIYSTGAPIL WYSVWAKTDEPE Sbjct: 129 LINTFRVEPALGSPSRGGLPETIARRTETGWRLSGHKIYSTGAPILSWYSVWAKTDEPEA 188 Query: 182 RVGLFLVPAGLPGTRIEETWDHLGLRASGSHTVIFDDVVFPLDYEIDVRRPDEWKVPDVT 241 R+GLFL+ AG PG RI ETWDHLGLRASGSH V+F+DVV PLD+EI++ +P +W+V + T Sbjct: 189 RLGLFLIQAGSPGIRIVETWDHLGLRASGSHDVVFEDVVIPLDHEIELHKPADWRVQNPT 248 Query: 242 QATVHAIFVAAIYDGIARAARDWLITFLKERVPANLGAPLATLPRMQEVVGAIEARLAVN 301 QA VHA FV AIYDG+ARAAR+W++ FLK R P++LGAPL+TLPR QEV+GAIEARL VN Sbjct: 249 QALVHAAFVGAIYDGVARAARNWIVDFLKTRTPSSLGAPLSTLPRAQEVLGAIEARLQVN 308 Query: 302 ARLIDSFAADFDNGFQLSAIESNIIKLTVTNNAAAVVEDALSLTSNHGLSRTNPLERHFR 361 ARLIDS A DFD G +S +E NIIKLTVTNNA A VEDALSL+SNHGLSRTNPLERH+R Sbjct: 309 ARLIDSVARDFDEGRAVSPVEGNIIKLTVTNNAVAAVEDALSLSSNHGLSRTNPLERHYR 368 Query: 362 DVLCGRVHTPQDDATRVSAGRSALGV 387 DVLCGRVHTPQDDATR++AGR ALG+ Sbjct: 369 DVLCGRVHTPQDDATRIAAGRLALGL 394 >ref|YP_001239315.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ35409.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 394 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 275/385 (71%), Positives = 314/385 (81%), Gaps = 3/385 (0%) Query: 6 ARELPPANAPEHIARALRLAEVFAARAPAHDRDASFPFENFADLSREGLLALTVP---AA 62 +R+ PAN E IARALRL VFA RAP HDRD SFPF+NF DL GLL+LTVP Sbjct: 10 SRQTAPANEDEVIARALRLVPVFAERAPLHDRDRSFPFQNFQDLFEAGLLSLTVPIALGG 69 Query: 63 LGGGEGDAIRVLGIIGKADPSTALVLSMHYIQHLVMARSTRWPARLSRKLAKETVEGVAL 122 G G G RVLGII +ADPSTALVL+MHYIQH VMAR +P RL+RKLA+++VE AL Sbjct: 70 HGAGAGLTARVLGIIAEADPSTALVLAMHYIQHFVMARHQEYPPRLARKLARDSVERGAL 129 Query: 123 INALRVEPELGSPARGGLPASTARRTETGWRLTGKKIYSTGAPILKWYSVWAKTDEPETR 182 IN RVEP LGSP+RGGLP + ARRTETGWRL+G KIYSTGAPIL WYSVWAKTDE E R Sbjct: 130 INTFRVEPALGSPSRGGLPETIARRTETGWRLSGHKIYSTGAPILSWYSVWAKTDEAEPR 189 Query: 183 VGLFLVPAGLPGTRIEETWDHLGLRASGSHTVIFDDVVFPLDYEIDVRRPDEWKVPDVTQ 242 +GLFLV AGLPG I ETWDHLGLRASGSH V+FDDVV PLD+EI++R+P++W+V + TQ Sbjct: 190 LGLFLVQAGLPGISIVETWDHLGLRASGSHDVVFDDVVVPLDHEIELRKPEDWRVQNPTQ 249 Query: 243 ATVHAIFVAAIYDGIARAARDWLITFLKERVPANLGAPLATLPRMQEVVGAIEARLAVNA 302 A VHA FV AIYDG+ARAAR+W++ FLK R P++LGAPLATL R QEV+GAIEARL VNA Sbjct: 250 ALVHAAFVGAIYDGVARAARNWIVDFLKTRTPSSLGAPLATLARAQEVLGAIEARLQVNA 309 Query: 303 RLIDSFAADFDNGFQLSAIESNIIKLTVTNNAAAVVEDALSLTSNHGLSRTNPLERHFRD 362 RLI S A DFD G +S +E N+IKLTVTNNA A VEDALSL+SNHGLSR NPLERH+RD Sbjct: 310 RLIHSVARDFDEGRVISPVEGNVIKLTVTNNAVAAVEDALSLSSNHGLSRANPLERHYRD 369 Query: 363 VLCGRVHTPQDDATRVSAGRSALGV 387 VLCGRVHTPQDDATR++AGR ALG+ Sbjct: 370 VLCGRVHTPQDDATRIAAGRLALGL 394 >ref|YP_918770.1| acyl-CoA dehydrogenase type 2 [Paracoccus denitrificans PD1222] gb|ABL73074.1| Acyl-CoA dehydrogenase, type 2, C-terminal domain [Paracoccus denitrificans PD1222] Length = 384 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/376 (55%), Positives = 254/376 (67%), Gaps = 6/376 (1%) Query: 16 EHIARALRLAEVFAARAPAHDRDASFPFENFADLSREGLLALTVPAALGGGEGD---AIR 72 + I A RLA+ FA A DR A FPF + L GLLALT P GG G A + Sbjct: 11 DEIGIAQRLADEFAVAAAQDDRAAGFPFRHIEALRESGLLALTAPQQFGGRGGGLEIAAQ 70 Query: 73 VLGIIGKADPSTALVLSMHYIQHLVMARSTRWPARLSRKLAKETVEGVALINALRVEPEL 132 V+ IG+ DP+ LVL M Y HL + RWPA L ++ ++ ALINALRVEPEL Sbjct: 71 VIREIGRGDPAIGLVLVMQY-AHLALLHRGRWPAALVARVVRDAATEGALINALRVEPEL 129 Query: 133 GSPARGGLPASTARRTETGWRLTGKKIYSTGAPILKWYSVWAKTDEPETRVGLFLVPAGL 192 G+P RGGLPA+ ARR + GW L+G+KIYSTG+ L+W VWA+TDE E RVG FLVP Sbjct: 130 GTPMRGGLPATVARRIDNGWLLSGRKIYSTGSEGLRWAIVWARTDEDEARVGQFLVPMQA 189 Query: 193 PGTRIEETWDHLGLRASGSHTVIFDDVVFPLDYEIDVRRPDEWKV-PDVTQATVHAIFVA 251 G RI TWD LGLRAS SH V FD+V+ P DY +D+RRP EW V D T A V ++ +A Sbjct: 190 DGVRIIPTWDTLGLRASSSHDVQFDEVLLPPDYAVDIRRPAEWAVRGDETSAWV-SLLIA 248 Query: 252 AIYDGIARAARDWLITFLKERVPANLGAPLATLPRMQEVVGAIEARLAVNARLIDSFAAD 311 A+Y G+A A RDW++ FLK RVPANLG PLA LPRMQE VGAIE R+AVN RLI S A D Sbjct: 249 ALYTGVAEAGRDWIVAFLKSRVPANLGKPLAELPRMQEAVGAIEERIAVNRRLIGSAARD 308 Query: 312 FDNGFQLSAIESNIIKLTVTNNAAAVVEDALSLTSNHGLSRTNPLERHFRDVLCGRVHTP 371 D G +A +S +IK T NA A VE AL L NHG++R NPLERH+RDVLCGR+H+P Sbjct: 309 MDAGQVPAASQSGLIKHVATENAIAAVEGALKLAGNHGIARRNPLERHYRDVLCGRIHSP 368 Query: 372 QDDATRVSAGRSALGV 387 Q+D+ V+AGR+ LG+ Sbjct: 369 QEDSVLVAAGRAVLGL 384 >ref|ZP_07677499.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] gb|EFP64232.1| acyl-CoA dehydrogenase family protein [Ralstonia sp. 5_7_47FAA] Length = 423 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/388 (53%), Positives = 257/388 (66%), Gaps = 23/388 (5%) Query: 23 RLAEVFAARAPA-------HDRDASFPFENFADLSREGLLALTVPAALGGGEG---DAIR 72 RLAEV A AP HD SFP ENFA L GL+A +P GGG A + Sbjct: 36 RLAEVLATIAPQLAASAAQHDLQGSFPHENFALLHASGLIAQVIPQTHGGGGAGLKTARQ 95 Query: 73 VLGIIGKADPSTALVLSMHYIQHLVMARS-TRWPARLSRKLAKETVEGVALINALRVEPE 131 ++ I AD +TALVL+M Y+QH +AR+ TRWPA + +++ + ALINALRVEP+ Sbjct: 96 IIASIAHADAATALVLTMTYLQHRAIARADTRWPAHVRQQVFATALNEGALINALRVEPD 155 Query: 132 LGSPARGGLPASTARRTETGWRLTGKKIYSTGAPILKWYSVWAKTDEPETRVGLFLVPAG 191 LG+PARGGLPA+ A R WR+ G+K+YSTG+P L+W SVW +TDE E RVG+FLVP Sbjct: 156 LGTPARGGLPATVATRVGNNWRIRGRKLYSTGSPALRWLSVWGRTDEAEPRVGIFLVPRP 215 Query: 192 LP---GTRIEETWDHLGLRASGSHTVIFDDVVFPLDYEIDVRRPDEWKVPDVTQATVHA- 247 LP G RIEETW+HLGLRASGSH VI +DV PLD+ +D+R EW QA A Sbjct: 216 LPETPGIRIEETWNHLGLRASGSHDVILEDVEIPLDHAVDIRPASEWAAHSAAQADTGAQ 275 Query: 248 --------IFVAAIYDGIARAARDWLITFLKERVPANLGAPLATLPRMQEVVGAIEARLA 299 + + ++YD +A+AARDWLI FL R PANLG PLATLPRMQEVVG + A L Sbjct: 276 LDQQAWMNVLLGSLYDAVAQAARDWLIQFLNTRAPANLGGPLATLPRMQEVVGEVAAALQ 335 Query: 300 VNARLIDSFAADFDNGFQLSAIESNIIKLTVTNNAAAVVEDALSLTSNHGLSRTNPLERH 359 N L+D A D G LS +S ++K TVT NA VE AL ++ NHGLSR NPLERH Sbjct: 336 TNRVLLDHAAEAADAGAPLSITDSGLLKYTVTTNAIRAVELALQVSGNHGLSRHNPLERH 395 Query: 360 FRDVLCGRVHTPQDDATRVSAGRSALGV 387 +RDVLC R+HTPQ+D+ ++AGR+ALGV Sbjct: 396 YRDVLCSRIHTPQNDSILLAAGRTALGV 423