BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0121.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773096.1| aliphatic sulfonates binding protein [Bradyrhiz... 538 e-151 ref|YP_001239312.1| putative aliphatic sulfonates-binding protei... 512 e-143 ref|YP_001753842.1| aliphatic sulfonate ABC transporter periplas... 482 e-134 ref|YP_001833466.1| aliphatic sulfonate ABC transporter periplas... 461 e-128 ref|YP_003450201.1| sulfonate/nitrate/taurine transport system s... 247 2e-63 >ref|NP_773096.1| aliphatic sulfonates binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51721.1| ssuA [Bradyrhizobium japonicum USDA 110] Length = 328 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 268/316 (84%), Positives = 299/316 (94%) Query: 11 YTFTRRTAAALITAVITLSTSAAALAADAIVLRVGDQKGGNRSLLEISGLAKDLPYKIEW 70 ++ TRR AA+L+ A ITLST+AA+ AAD +VLRVGDQKGGNRSLLEISG AKDLPYKIEW Sbjct: 10 HSLTRRLAASLLAAAITLSTAAASFAADTVVLRVGDQKGGNRSLLEISGYAKDLPYKIEW 69 Query: 71 SEFPAAAPILEAINAGALDVGYTGDLSFLTVYASGAPIKAIGGTRSDARTQAILVRGDSP 130 SEFPAAAPILEA+NAGALDVGYTGDLSFL+VYA+GAPIKAIGGTRSDA+TQAILVR DSP Sbjct: 70 SEFPAAAPILEALNAGALDVGYTGDLSFLSVYAAGAPIKAIGGTRSDAKTQAILVRQDSP 129 Query: 131 IKTAADLKGKRLAGTRGGWGQFLINATLEKAGSRIEDATFAPLGPVDAKIALLAGSIDAW 190 IK+AADL+GKRLAGTRGGWGQFLI+ATLEKA ++EDATFAPLGPVDAKIAL+AGSIDAW Sbjct: 130 IKSAADLRGKRLAGTRGGWGQFLIDATLEKAQIKLEDATFAPLGPVDAKIALVAGSIDAW 189 Query: 191 AVWEPYISYATLKDKARVVADGEGLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWS 250 AVWEPY+SYATLKDKARV+ADG+GLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWS Sbjct: 190 AVWEPYVSYATLKDKARVIADGDGLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWS 249 Query: 251 LDHLAEYARNTAELTKLPEDVLLAAYTAQKTSPIAIDEGVVKEVQAASDRATRYGILGKT 310 LDH+AEYA +TAELT+LPEDVL +AYTAQ+TSPI IDE V+KE+QAASDR+TRYGIL K Sbjct: 250 LDHVAEYATSTAELTRLPEDVLQSAYTAQRTSPIVIDENVLKEIQAASDRSTRYGILPKK 309 Query: 311 LDVGKAVDRSFTASAS 326 LDV +AVDRSFTA+A+ Sbjct: 310 LDVNQAVDRSFTAAAA 325 >ref|YP_001239312.1| putative aliphatic sulfonates-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ35406.1| Putative aliphatic sulfonates-binding protein precursor (SsuA protein) [Bradyrhizobium sp. BTAi1] Length = 311 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 258/311 (82%), Positives = 285/311 (91%), Gaps = 1/311 (0%) Query: 18 AAALITAVITLSTSAAALAADAIVLRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAA 77 AA L TA++ L+ +A A A D+IVLRVGDQKGGNRSLLEISGLA+DLPYKIEW+EFPAAA Sbjct: 2 AATLGTALL-LAGTAFAAAGDSIVLRVGDQKGGNRSLLEISGLARDLPYKIEWAEFPAAA 60 Query: 78 PILEAINAGALDVGYTGDLSFLTVYASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADL 137 PILEAINAG+LDVGYTGDLSFLTVYA GAPIKAIGGTRSDA+TQAILVR DSPIK+A DL Sbjct: 61 PILEAINAGSLDVGYTGDLSFLTVYAGGAPIKAIGGTRSDAKTQAILVRKDSPIKSAVDL 120 Query: 138 KGKRLAGTRGGWGQFLINATLEKAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYI 197 KGKRLAGTRGGWGQFLI+ATLEKAG ++++ATFAPLGPVDAK+ALLAGS+DAWAVWEPYI Sbjct: 121 KGKRLAGTRGGWGQFLIDATLEKAGYKLDEATFAPLGPVDAKVALLAGSVDAWAVWEPYI 180 Query: 198 SYATLKDKARVVADGEGLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWSLDHLAEY 257 SYATLKD ARVV+ GEGLTPTITFIVASD AIATKRAA+QD V RLN+ARLWSLDH+A+Y Sbjct: 181 SYATLKDGARVVSHGEGLTPTITFIVASDTAIATKRAALQDFVNRLNQARLWSLDHVADY 240 Query: 258 ARNTAELTKLPEDVLLAAYTAQKTSPIAIDEGVVKEVQAASDRATRYGILGKTLDVGKAV 317 AR+TAELTKLPEDVLLAAY AQ+T+PI ID+ VV EVQAASDRATRYGIL +TLDV KAV Sbjct: 241 ARSTAELTKLPEDVLLAAYQAQRTTPIVIDDVVVTEVQAASDRATRYGILSRTLDVSKAV 300 Query: 318 DRSFTASASLN 328 DRSFT A N Sbjct: 301 DRSFTVPAGSN 311 >ref|YP_001753842.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Methylobacterium radiotolerans JCM 2831] gb|ACB23159.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Methylobacterium radiotolerans JCM 2831] Length = 332 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 239/305 (78%), Positives = 274/305 (89%), Gaps = 1/305 (0%) Query: 23 TAVITLSTSAAALA-ADAIVLRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAAPILE 81 T ++ ++T AA A A+ +VLRVGDQKGGNRSLLEI+G AKDLPY+I WSEFPAAAPILE Sbjct: 27 TTMLAMTTLAAVTARAEEVVLRVGDQKGGNRSLLEIAGDAKDLPYRIAWSEFPAAAPILE 86 Query: 82 AINAGALDVGYTGDLSFLTVYASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADLKGKR 141 A+NAGALDVGYTGDLSFLT A+GAPIKAIGGT+SD RTQAILVR DSPI++AADLKGKR Sbjct: 87 ALNAGALDVGYTGDLSFLTAVAAGAPIKAIGGTKSDPRTQAILVRADSPIRSAADLKGKR 146 Query: 142 LAGTRGGWGQFLINATLEKAGSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYISYAT 201 LAGTRGGWGQFLI+ATLEKAG +ATFAPL PVDAK+AL+AGS+DAWAVWEPY+++A Sbjct: 147 LAGTRGGWGQFLISATLEKAGIAPSEATFAPLNPVDAKVALMAGSVDAWAVWEPYVAFAM 206 Query: 202 LKDKARVVADGEGLTPTITFIVASDNAIATKRAAVQDLVQRLNKARLWSLDHLAEYARNT 261 LKD+AR +ADG GLTPTITF+VA+D+AIATKRAA+QD + RL++ARLWSLDHL YARNT Sbjct: 207 LKDRARPIADGAGLTPTITFVVATDSAIATKRAALQDFLSRLSRARLWSLDHLDAYARNT 266 Query: 262 AELTKLPEDVLLAAYTAQKTSPIAIDEGVVKEVQAASDRATRYGILGKTLDVGKAVDRSF 321 A LTKLPEDVL AAYTAQ+T PIA+D+GVVKEVQ ASDRATRYGIL KTLDVG+AVDRSF Sbjct: 267 AVLTKLPEDVLRAAYTAQRTRPIALDDGVVKEVQDASDRATRYGILSKTLDVGRAVDRSF 326 Query: 322 TASAS 326 T +AS Sbjct: 327 TEAAS 331 >ref|YP_001833466.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB95977.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 324 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 226/322 (70%), Positives = 269/322 (83%), Gaps = 5/322 (1%) Query: 4 LTRSGSPYTFTRRTAAALITAV-ITLSTSAAALAADAIVLRVGDQKGGNRSLLEISGLAK 62 L R+G +RT L+ A + LS+ A AA+ + LRVGDQKGGN SLL+ISGLAK Sbjct: 2 LRRAGK----VQRTIVGLVNAFALLLSSIIIAKAAEQVTLRVGDQKGGNHSLLDISGLAK 57 Query: 63 DLPYKIEWSEFPAAAPILEAINAGALDVGYTGDLSFLTVYASGAPIKAIGGTRSDARTQA 122 DLPYKIEWSEFPAAAPILEA+NAGALDVGYTGDL+FLTV+ASGAPIKAIGGTR +A TQA Sbjct: 58 DLPYKIEWSEFPAAAPILEALNAGALDVGYTGDLAFLTVFASGAPIKAIGGTRLNAHTQA 117 Query: 123 ILVRGDSPIKTAADLKGKRLAGTRGGWGQFLINATLEKAGSRIEDATFAPLGPVDAKIAL 182 I+VRG+SP+ +AADLKGKRLAGTR GWGQFLI+ATLEK G + ED F PLGPVDAKIAL Sbjct: 118 IVVRGNSPLHSAADLKGKRLAGTRAGWGQFLIDATLEKQGYKQEDVNFVPLGPVDAKIAL 177 Query: 183 LAGSIDAWAVWEPYISYATLKDKARVVADGEGLTPTITFIVASDNAIATKRAAVQDLVQR 242 LAGS+D WA+WEPY+SYA LKD ARV+ADGEGLTP+I F+VA+++AI K+AAV D +QR Sbjct: 178 LAGSVDGWAIWEPYVSYALLKDGARVIADGEGLTPSIMFVVATNSAIINKQAAVADFLQR 237 Query: 243 LNKARLWSLDHLAEYARNTAELTKLPEDVLLAAYTAQKTSPIAIDEGVVKEVQAASDRAT 302 L+KARLW+LDH+ +YARNTAE+TKLPEDVL+ AYT Q SPI ID+ +KE QAA+DRA Sbjct: 238 LSKARLWALDHIGDYARNTAEITKLPEDVLVRAYTDQHESPIVIDDATIKEFQAAADRAH 297 Query: 303 RYGILGKTLDVGKAVDRSFTAS 324 RYGIL K +DV ++VD+ FTA+ Sbjct: 298 RYGILSKPVDVHQSVDQQFTAA 319 >ref|YP_003450201.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Azospirillum sp. B510] dbj|BAI73657.1| sulfonate/nitrate/taurine transport system substrate-binding protein [Azospirillum sp. B510] Length = 346 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 125/286 (43%), Positives = 180/286 (62%) Query: 42 LRVGDQKGGNRSLLEISGLAKDLPYKIEWSEFPAAAPILEAINAGALDVGYTGDLSFLTV 101 L+VGDQ+ RSLLE SG KD+PY +E+++FPAAAP+LEA+NAGA+D G+ GD + Sbjct: 53 LKVGDQRSTIRSLLEASGQLKDIPYTLEFADFPAAAPVLEALNAGAIDAGFAGDAAHAFA 112 Query: 102 YASGAPIKAIGGTRSDARTQAILVRGDSPIKTAADLKGKRLAGTRGGWGQFLINATLEKA 161 ++G P K I RSD +LVR DSPI+T ADLKG+ + RG G +L+ A L+ Sbjct: 113 LSNGLPAKIISAARSDPGCIGLLVRKDSPIRTVADLKGRTITAVRGSIGHYLVVAALKAN 172 Query: 162 GSRIEDATFAPLGPVDAKIALLAGSIDAWAVWEPYISYATLKDKARVVADGEGLTPTITF 221 G + D T A L P +AK A +G++DAWA+W Y++ + RV+ DG GL F Sbjct: 173 GLSVSDVTLAFLQPTEAKSAFSSGTVDAWAIWTLYVAQEVVAGTGRVLVDGRGLLNNNAF 232 Query: 222 IVASDNAIATKRAAVQDLVQRLNKARLWSLDHLAEYARNTAELTKLPEDVLLAAYTAQKT 281 I A+D AIA KRA +QD V R+ AR+W+L ++ +YAR +L K+ ++ +AAYT ++ Sbjct: 233 ISATDVAIAQKRALLQDYVARVAAARIWALGNVEQYARIWGDLVKVTPEIAVAAYTLERF 292 Query: 282 SPIAIDEGVVKEVQAASDRATRYGILGKTLDVGKAVDRSFTASASL 327 P+A+D+G+V ++Q +D T G++ K DRSF A L Sbjct: 293 RPVAVDDGIVADLQTTADFYTGIGVIQKPFSAAAHADRSFALDAGL 338