BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0119.p (317 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004685966.1| TauT family ABC transporter permease [Cupria... 332 7e-89 ref|YP_726710.1| ABC transporter periplasmic protein [Ralstonia ... 330 2e-88 ref|YP_296185.1| ABC transporter, substrate-binding protein, ali... 330 2e-88 ref|YP_001352429.1| sulfonate ABC transporter, periplasmic sulfo... 324 1e-86 ref|YP_002005791.1| alkanesulfonate transporter; ABC superfamily... 322 4e-86 >ref|YP_004685966.1| TauT family ABC transporter permease [Cupriavidus necator N-1] gb|AEI77485.1| ABC transport system permease protein TauT family [Cupriavidus necator N-1] Length = 342 Score = 332 bits (850), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 176/321 (54%), Positives = 220/321 (68%), Gaps = 9/321 (2%) Query: 2 RNWLGRSLALAVA---GLLLGWSALPSAQARDKVFRIAFQKGGGNLIFLKERGILEQKLA 58 R + +L LA GLL G + S KV RI +QK G L LK RG LE++LA Sbjct: 14 RRLITAALVLATGLAYGLLPGRAEAQSKNIDPKVLRIGYQKYG-TLTLLKARGSLEKRLA 72 Query: 59 PLGWTVSWNEFQAGPQLLESLNIGAADFGPVGEAPPIFAQAAGANIVYAGYEPASPRNEA 118 P G TV W EF AGPQLLE LN+GA DFG VGEAPPIFAQAAGA++VY G EP +P EA Sbjct: 73 PQGITVKWTEFPAGPQLLEGLNVGAVDFGTVGEAPPIFAQAAGAHLVYVGNEPPAPVAEA 132 Query: 119 IIVPKDSPIKTIPDLRKKRVALNKGSNVNYFLVRALEANGLTYQDIEPVYLAPADARAAF 178 I+VPK S ++++ +LR KRVALNKGSNV+Y LVR LE G+ Y +I+PVYL PADARAAF Sbjct: 133 IVVPKGSALRSVAELRGKRVALNKGSNVHYLLVRQLEKAGIPYSEIQPVYLPPADARAAF 192 Query: 179 ERRAVDAWVIWDPYYAAAEIGLGARSIADASG-----LAANVSFYIASRPIAEENPKVLT 233 ER AVDAWVIWDP+ AAAE LGAR +AD G + +N FY+ASRP A+ P++++ Sbjct: 193 ERGAVDAWVIWDPFLAAAEKQLGARVLADGRGEDGKNVVSNHQFYLASRPYAQAKPEIVS 252 Query: 234 TVLTAIDEIDLWIRDNRKQYAAELSPKIGLPADIIEHSVNRAELGARRVDASVLAEQQKI 293 +L + + W + N K+ L+ + GLPAD++E +V+R GAR V A V+AEQQ+I Sbjct: 253 LILDELATLGTWAQKNPKEATTVLTGETGLPADVLELAVSRFSYGARPVSAEVMAEQQRI 312 Query: 294 ADVFTRLKLIPKAINVFDAEW 314 AD F LKLIPK + V DA W Sbjct: 313 ADAFHSLKLIPKPVKVADARW 333 >ref|YP_726710.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] emb|CAJ93342.1| ABC-type transporter, periplasmic component: TauT family [Ralstonia eutropha H16] Length = 342 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 176/321 (54%), Positives = 218/321 (67%), Gaps = 9/321 (2%) Query: 2 RNWLGRSLALAVA---GLLLGWSALPSAQARDKVFRIAFQKGGGNLIFLKERGILEQKLA 58 R + +L LA GLL G + S KV RI +QK G L LK RG LE++L Sbjct: 14 RRLITAALVLATGLAYGLLPGRAEAQSKNIDPKVLRIGYQKYG-TLTLLKARGTLEKRLV 72 Query: 59 PLGWTVSWNEFQAGPQLLESLNIGAADFGPVGEAPPIFAQAAGANIVYAGYEPASPRNEA 118 P G TV W EF AGPQLLE LN+GA DFG VGEAPPIFAQAAGA +VY G EP +P EA Sbjct: 73 PQGITVKWTEFPAGPQLLEGLNVGAVDFGTVGEAPPIFAQAAGAQLVYVGNEPPAPVAEA 132 Query: 119 IIVPKDSPIKTIPDLRKKRVALNKGSNVNYFLVRALEANGLTYQDIEPVYLAPADARAAF 178 I+VPK S I+++ +LR KRVALNKGSNV+Y LVR LE G+ Y +I+PVYL PADARAAF Sbjct: 133 IVVPKGSAIRSVAELRGKRVALNKGSNVHYLLVRQLEKAGIPYNEIQPVYLPPADARAAF 192 Query: 179 ERRAVDAWVIWDPYYAAAEIGLGARSIADASG-----LAANVSFYIASRPIAEENPKVLT 233 ER AVDAWVIWDP+ AAAE LGAR +AD G + +N FY+ASRP A+ P++++ Sbjct: 193 ERGAVDAWVIWDPFLAAAEKQLGARVLADGRGADGKNVVSNHQFYLASRPYAQAKPEIVS 252 Query: 234 TVLTAIDEIDLWIRDNRKQYAAELSPKIGLPADIIEHSVNRAELGARRVDASVLAEQQKI 293 +L + + W + N K+ L+ + GLPAD++E +V+R GAR V A VLAEQQ+I Sbjct: 253 LILDELATLGTWAQSNPKEATTVLTGETGLPADVLELAVSRFSYGARPVSAGVLAEQQRI 312 Query: 294 ADVFTRLKLIPKAINVFDAEW 314 AD F LKLIP+ + V DA W Sbjct: 313 ADAFHSLKLIPRPVKVADARW 333 >ref|YP_296185.1| ABC transporter, substrate-binding protein, aliphatic sulphonates [Ralstonia eutropha JMP134] gb|AAZ61341.1| ABC transporter, substrate-binding protein, aliphatic sulfonates [Ralstonia eutropha JMP134] Length = 351 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 179/322 (55%), Positives = 218/322 (67%), Gaps = 9/322 (2%) Query: 2 RNWLGRSLALAVA---GLLLGWSALPSAQARDKVFRIAFQKGGGNLIFLKERGILEQKLA 58 R L +L LA G+L G + S KV RI +QK G L LK RG LE++LA Sbjct: 27 RRILAAALVLATGLAYGVLPGRAEAQSKNVDPKVLRIGYQKYG-TLTLLKARGTLEKRLA 85 Query: 59 PLGWTVSWNEFQAGPQLLESLNIGAADFGPVGEAPPIFAQAAGANIVYAGYEPASPRNEA 118 P G TV W EF AGPQLLE LN+GA DFG VGEAPPIFAQAAGA + Y G EP +P EA Sbjct: 86 PQGITVKWTEFPAGPQLLEGLNVGAIDFGTVGEAPPIFAQAAGAQLAYIGNEPPAPTAEA 145 Query: 119 IIVPKDSPIKTIPDLRKKRVALNKGSNVNYFLVRALEANGLTYQDIEPVYLAPADARAAF 178 I+VPKDS IK++ DLR KRVALNKGSNV+Y LVR LE G+ + DI+PVYL PADARAAF Sbjct: 146 IVVPKDSAIKSVADLRGKRVALNKGSNVHYLLVRQLEKAGIPFSDIQPVYLPPADARAAF 205 Query: 179 ERRAVDAWVIWDPYYAAAEIGLGARSIADASG-----LAANVSFYIASRPIAEENPKVLT 233 ER AVDAWVIWDP+ AAAE LGAR +AD G + +N FY+ASRP A+ P+++ Sbjct: 206 ERGAVDAWVIWDPFLAAAEKQLGARVVADGRGADGKNVVSNHQFYLASRPYAQARPEIVK 265 Query: 234 TVLTAIDEIDLWIRDNRKQYAAELSPKIGLPADIIEHSVNRAELGARRVDASVLAEQQKI 293 +L + + W N K +A L+ ++GL +++ +V+R GAR V A VLAEQQ+I Sbjct: 266 LLLDELASLGAWAEKNPKDSSAVLTGELGLDPAVLDLAVSRFSYGARPVSADVLAEQQRI 325 Query: 294 ADVFTRLKLIPKAINVFDAEWK 315 ADVF LKLIPK I V DA W+ Sbjct: 326 ADVFHSLKLIPKPIKVSDASWQ 347 >ref|YP_001352429.1| sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA [Janthinobacterium sp. Marseille] gb|ABR91819.1| sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA [Janthinobacterium sp. Marseille] Length = 326 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 170/311 (54%), Positives = 216/311 (69%), Gaps = 2/311 (0%) Query: 2 RNWLGRSLALAVAGLLLGWSALPSAQARDKVFRIAFQKGGGNLIFLKERGILEQKLAPLG 61 R LG A A+ L G AQ++ V RI +QK G L+ LK RG LE++LA Sbjct: 12 RRTLGYLSAAAIGALSSGLPNFAGAQSKS-VLRIGYQKYG-TLVILKGRGTLEKRLAAEN 69 Query: 62 WTVSWNEFQAGPQLLESLNIGAADFGPVGEAPPIFAQAAGANIVYAGYEPASPRNEAIIV 121 V W EF AGP LLE LN+G+ DFG VGEAPPIFAQAAGA++VY G EP SP +EAIIV Sbjct: 70 IEVKWTEFPAGPVLLEGLNVGSIDFGTVGEAPPIFAQAAGADLVYVGNEPPSPTSEAIIV 129 Query: 122 PKDSPIKTIPDLRKKRVALNKGSNVNYFLVRALEANGLTYQDIEPVYLAPADARAAFERR 181 PK+S +KT+ DL+ K+VALNKGSNV+Y LV+ALE L Y+DIE ++LAPADARAAFER Sbjct: 130 PKNSTLKTVADLKGKKVALNKGSNVHYLLVKALEKASLDYKDIETIFLAPADARAAFERG 189 Query: 182 AVDAWVIWDPYYAAAEIGLGARSIADASGLAANVSFYIASRPIAEENPKVLTTVLTAIDE 241 +VDAWVIWDP+ AAAE +GAR +AD +G+ AN F++ASR AE+NPK+++ +L +D+ Sbjct: 190 SVDAWVIWDPFLAAAEKQIGARVLADGTGIVANHQFFLASRSYAEKNPKIVSILLDELDQ 249 Query: 242 IDLWIRDNRKQYAAELSPKIGLPADIIEHSVNRAELGARRVDASVLAEQQKIADVFTRLK 301 +D W N + + L + GL +E + R G + V A V+AEQQKIADVF+ LK Sbjct: 250 VDQWSSKNLAEVSKVLVAQTGLDLPSVELAAKRYSYGVKPVTAEVIAEQQKIADVFSNLK 309 Query: 302 LIPKAINVFDA 312 LIPK I V DA Sbjct: 310 LIPKKITVKDA 320 >ref|YP_002005791.1| alkanesulfonate transporter; ABC superfamily, substrate binding unit [Cupriavidus taiwanensis LMG 19424] emb|CAQ69726.1| alkanesulfonate transport protein; ABC superfamily, substrate binding unit [Cupriavidus taiwanensis LMG 19424] Length = 342 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 169/304 (55%), Positives = 211/304 (69%), Gaps = 6/304 (1%) Query: 16 LLLGWSALPSAQARDKVFRIAFQKGGGNLIFLKERGILEQKLAPLGWTVSWNEFQAGPQL 75 LL G + S Q KV RI +QK G L LK RG LE++LAP G +V W EF AGPQL Sbjct: 31 LLPGRAEAQSNQIDPKVLRIGYQKYG-TLTLLKARGTLEKRLAPQGISVRWTEFPAGPQL 89 Query: 76 LESLNIGAADFGPVGEAPPIFAQAAGANIVYAGYEPASPRNEAIIVPKDSPIKTIPDLRK 135 LE LN+GA DFG VGEAPPIFAQAAGA +VY G EP +P EAI+VP+ S ++++ DLR Sbjct: 90 LEGLNVGAIDFGTVGEAPPIFAQAAGAQLVYVGNEPPAPVAEAIVVPRGSALRSVADLRG 149 Query: 136 KRVALNKGSNVNYFLVRALEANGLTYQDIEPVYLAPADARAAFERRAVDAWVIWDPYYAA 195 KRVALNKGSNV+Y LVR LE G+ Y +I+PVYL PADARAAFER AVDAWVIWDP+ AA Sbjct: 150 KRVALNKGSNVHYLLVRQLEQAGVPYSEIQPVYLPPADARAAFERGAVDAWVIWDPFLAA 209 Query: 196 AEIGLGARSIADASG-----LAANVSFYIASRPIAEENPKVLTTVLTAIDEIDLWIRDNR 250 AE LGAR +AD G + +N FY+ASRP A+ P++++ +L + + W + Sbjct: 210 AEKQLGARVLADGRGADGRNVVSNHQFYLASRPYAQARPEIVSLILDELATLGTWAQQYP 269 Query: 251 KQYAAELSPKIGLPADIIEHSVNRAELGARRVDASVLAEQQKIADVFTRLKLIPKAINVF 310 K+ L+ + GLPAD++ +V+R GAR V A VLAEQQ+IAD F LKLIPK + V Sbjct: 270 KEATTVLTGETGLPADVLALAVSRFSYGARPVSAEVLAEQQRIADAFYSLKLIPKPVKVA 329 Query: 311 DAEW 314 +A W Sbjct: 330 EARW 333