BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0118.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06897438.1| 3-oxoacyl-[acyl-carrier-protein] reductase [R... 294 1e-77 ref|YP_673616.1| short-chain dehydrogenase/reductase SDR [Mesorh... 268 6e-70 ref|ZP_02186727.1| short-chain dehydrogenase/reductase SDR [alph... 253 3e-65 ref|YP_629772.1| short chain dehydrogenase/reductase family oxid... 224 1e-56 ref|YP_004663246.1| short chain dehydrogenase/reductase family o... 224 2e-56 >ref|ZP_06897438.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Roseomonas cervicalis ATCC 49957] gb|EFH10861.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Roseomonas cervicalis ATCC 49957] Length = 254 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 157/259 (60%), Positives = 185/259 (71%), Gaps = 5/259 (1%) Query: 42 MQLSMKDRVAVVTGGSKGIGIAVARRFAESGAKVAILARGAADLTAAREALAKDGLVVRD 101 M+LS++ R A++TGGSKG+G+A+AR F E+GAKVAI+ARG A L A L Sbjct: 1 MKLSLEGRTALITGGSKGLGLAMARAFGEAGAKVAIVARGEAALAQAAAETGAHPLQ--- 57 Query: 102 YVCDVAKAADITKAHDQIVADLGKIDVLVNNAGTARTLAFESISDEAWQEDLDLKLFAAI 161 D+A A A D VA LG++D+LVNNAGT++ AF +SD WQ+DLDLKLFAAI Sbjct: 58 --ADIATAEGCEAAFDGAVAALGRVDILVNNAGTSQRGAFPEVSDSLWQQDLDLKLFAAI 115 Query: 162 RFSRLVWPGMKQRRWGRIINVLNTFAKAPAGNSAPTSVSRAAGMALTKVMANEGGEHNIL 221 R SR W GM +RRWGRIINVLN AKAP APT+VSRAAGMALTKVMA+EG H IL Sbjct: 116 RLSRRAWAGMAERRWGRIINVLNIGAKAPPAQGAPTAVSRAAGMALTKVMAHEGAPHGIL 175 Query: 222 VNALLVGLIMSDQWVKRHAAQAPSTDFGEFAKGLAKGTPLGRIGTAEEFANLACFLASEQ 281 VNALLVG+I SDQWV+RHAA F + + +A PLGR+G EEFA A FLASE Sbjct: 176 VNALLVGIIESDQWVRRHAADPRGLSFEAWKQEMAAPVPLGRLGRPEEFAATALFLASEA 235 Query: 282 GSYITGTAINVDGGRSPVV 300 G YITGTA+NVDGGRSPVV Sbjct: 236 GGYITGTALNVDGGRSPVV 254 >ref|YP_673616.1| short-chain dehydrogenase/reductase SDR [Mesorhizobium sp. BNC1] gb|ABG62451.1| short-chain dehydrogenase/reductase SDR [Chelativorans sp. BNC1] Length = 260 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 139/261 (53%), Positives = 180/261 (68%), Gaps = 3/261 (1%) Query: 42 MQLSMKDRVAVVTGGSKGIGIAVARRFAESGAKVAILARGAADLTAAREALAK--DGLVV 99 M++S+ R AV+TGGSKG+G A A RFA SGA VAILAR + L A ++K G V+ Sbjct: 1 MEVSLAGRAAVITGGSKGLGFATANRFAASGADVAILARTQSTLDEAVAEISKTAKGRVL 60 Query: 100 RDYVCDVAKAADITKAHDQIVADLGKIDVLVNNAGTARTLAFESISDEAWQEDLDLKLFA 159 CDVAKAA+ A+D++V+ GK+D+LVNNAG +R FE I+D W +DL+ KL Sbjct: 61 -GVSCDVAKAAETQAAYDKVVSAFGKVDILVNNAGESRLARFEEITDAMWHDDLEQKLMG 119 Query: 160 AIRFSRLVWPGMKQRRWGRIINVLNTFAKAPAGNSAPTSVSRAAGMALTKVMANEGGEHN 219 AIR +RLVW MK+RRWGR+INVL+ AK APT+VSRAAG+ALTKV+A EG + Sbjct: 120 AIRMTRLVWTQMKERRWGRVINVLSINAKNSRPGGAPTTVSRAAGLALTKVLAGEGAPYG 179 Query: 220 ILVNALLVGLIMSDQWVKRHAAQAPSTDFGEFAKGLAKGTPLGRIGTAEEFANLACFLAS 279 +LVNAL+VG I+SDQ +RH + E + K PLGR+G EEFAN+ACFLAS Sbjct: 180 VLVNALMVGNIVSDQTFRRHRMRTDGITLEEMVAEIGKDIPLGRMGQPEEFANMACFLAS 239 Query: 280 EQGSYITGTAINVDGGRSPVV 300 + SY+TG AI VDGG++P + Sbjct: 240 DLASYVTGAAIPVDGGKAPFI 260 >ref|ZP_02186727.1| short-chain dehydrogenase/reductase SDR [alpha proteobacterium BAL199] gb|EDP66964.1| short-chain dehydrogenase/reductase SDR [alpha proteobacterium BAL199] Length = 263 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 146/263 (55%), Positives = 180/263 (68%), Gaps = 4/263 (1%) Query: 42 MQLSMKDRVAVVTGGSKGIGIAVARRFAESGAKVAILARGAADLT-AAREALAKDGLVVR 100 MQ+ + R A++TGGS G+G A+A RF E+GA+V I AR A L+ A A G Sbjct: 1 MQVRLDGRTALITGGSLGVGRAIATRFVEAGARVVITARRAEILSEACDAIAAAAGSPPT 60 Query: 101 DYVCDVAKAADITKAHDQIVADLGKIDVLVNNAGTARTLAFESISDEAWQEDLDLKLFAA 160 DVA AAD + + A +G ID+LVNNAG+++ F + DE WQ DLDLKLFAA Sbjct: 61 AIAADVADAADCARLIREAEAAVGPIDILVNNAGSSKRAPFLDVDDETWQADLDLKLFAA 120 Query: 161 IRFSRLVWPGMKQRRWGRIINVLNTFAKAPAGNSAPTSVSRAAGMALTKVMANEGGEHNI 220 IR +R V PGM +RRWGRIINVLNT AKAP APT+VSRAAGMALTKV+A E HN+ Sbjct: 121 IRLARRVIPGMVERRWGRIINVLNTGAKAPPAEGAPTAVSRAAGMALTKVLAGELAPHNV 180 Query: 221 LVNALLVGLIMSDQWVKRH---AAQAPSTDFGEFAKGLAKGTPLGRIGTAEEFANLACFL 277 LVNALLVG I SDQWV+RH AA + ++ +A+ PLGR+G A+EFA +AC L Sbjct: 181 LVNALLVGRIKSDQWVRRHAAGAAGGSNASLDDYYADMARNIPLGRVGEADEFAAVACLL 240 Query: 278 ASEQGSYITGTAINVDGGRSPVV 300 AS+ G Y++GTAINVDGG SPVV Sbjct: 241 ASDLGGYVSGTAINVDGGLSPVV 263 >ref|YP_629772.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus xanthus DK 1622] gb|ABF90494.1| oxidoreductase, short-chain dehydrogenase/reductase family [Myxococcus xanthus DK 1622] Length = 259 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 131/261 (50%), Positives = 164/261 (62%), Gaps = 4/261 (1%) Query: 42 MQLSMKDRVAVVTGGSKGIGIAVARRFAESGAKVAILARGAADLTAAREALAKDGLVVRD 101 M L + +V +VTGGS+G+G AVARR GAKVA+ ARGA L A AL +G V Sbjct: 1 MDLELGGKVVLVTGGSEGLGAAVARRLVREGAKVALCARGAERLEATAAALRAEGGDVLT 60 Query: 102 YVCDVAKAADITKAHDQIVADLGKIDVLVNNAGTARTLAFESISDEAWQEDLDLKLFAAI 161 DV++A ++ D A G+ID LVNNAGTA F S+SD W+ DL LK+FAAI Sbjct: 61 VQADVSRAWEVEHFVDAAHARFGRIDGLVNNAGTAAGRPFASVSDAEWEADLQLKVFAAI 120 Query: 162 RFSRLVWPGMKQRRWGRIINVLNTFAKAPAGNSAPTSVSRAAGMALTKVMANEGGEHNIL 221 R SR P +K+ G I+NVL AK P NS P+SVSRAAG+ALTK ++ E G H I Sbjct: 121 RASRQALPFLKESGSGAIVNVLAIAAKTPGANSTPSSVSRAAGLALTKALSKELGPHAIR 180 Query: 222 VNALLVGLIMSDQWVKRHAAQAPSTDFGEFAKGLAK--GTPLGRIGTAEEFANLACFLAS 279 VNA+LVG+I S QW +R A+ F + +A+ G PLGR+G AEEFA+ FL S Sbjct: 181 VNAVLVGIIESGQWARR--AKEVGKPMESFLQEMARHAGIPLGRVGKAEEFADTVAFLLS 238 Query: 280 EQGSYITGTAINVDGGRSPVV 300 +G YI+G AINVDGG S V Sbjct: 239 PRGGYISGAAINVDGGLSAAV 259 >ref|YP_004663246.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus fulvus HW-1] gb|AEI62168.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus fulvus HW-1] Length = 259 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 130/261 (49%), Positives = 164/261 (62%), Gaps = 4/261 (1%) Query: 42 MQLSMKDRVAVVTGGSKGIGIAVARRFAESGAKVAILARGAADLTAAREALAKDGLVVRD 101 M L + +V +VTGGS+G+G AVARR GAKVA+ ARG L A AL +G V Sbjct: 1 MDLELGGKVVLVTGGSEGLGAAVARRLVREGAKVALCARGVERLEATAAALRAEGGDVLT 60 Query: 102 YVCDVAKAADITKAHDQIVADLGKIDVLVNNAGTARTLAFESISDEAWQEDLDLKLFAAI 161 DV++A ++ D A G+ID LVNNAGTA F S+SD W+ DL LK+FAAI Sbjct: 61 VQADVSRAWEVEHFVDAAHARFGRIDALVNNAGTAAGRPFASVSDAEWEADLQLKVFAAI 120 Query: 162 RFSRLVWPGMKQRRWGRIINVLNTFAKAPAGNSAPTSVSRAAGMALTKVMANEGGEHNIL 221 R SR P +K+ G I+NVL AK P NS P+SVSRAAG+ALTK ++ E G H+I Sbjct: 121 RASRQALPFLKESGGGAIVNVLAIAAKTPGANSTPSSVSRAAGLALTKALSKEFGPHDIR 180 Query: 222 VNALLVGLIMSDQWVKRHAAQAPSTDFGEFAKGLAK--GTPLGRIGTAEEFANLACFLAS 279 VNA+LVG+I S QW +R A+ F + +A+ G PLGR+G AEEFA+ FL S Sbjct: 181 VNAVLVGIIESGQWERR--AREVGKPVESFQQEMARHAGIPLGRVGKAEEFADTVAFLLS 238 Query: 280 EQGSYITGTAINVDGGRSPVV 300 +G YI+G AINVDGG S V Sbjct: 239 PRGGYISGAAINVDGGLSAAV 259