BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0114.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_947986.1| putative ABC transporter permease [Rhodopseudom... 475 e-132 ref|YP_568289.1| binding-protein-dependent transport systems inn... 466 e-129 ref|YP_001205941.1| putative ABC transporter permease [Bradyrhiz... 461 e-128 ref|YP_484660.1| binding-protein dependent transport system inne... 461 e-128 ref|YP_001240281.1| putative ABC transporter permease [Bradyrhiz... 459 e-127 >ref|NP_947986.1| putative ABC transporter permease [Rhodopseudomonas palustris CGA009] ref|YP_001991899.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris TIE-1] emb|CAE28085.1| putative ABC transporter permease protein [Rhodopseudomonas palustris CGA009] gb|ACF01424.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris TIE-1] Length = 276 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 255/276 (92%), Positives = 270/276 (97%) Query: 1 MDAVKRYFRSPAAVIGLILLLLVIAMAISAGLLYPRDPLALAGRPLIWPFSNPRFLLGTD 60 MD +KRYFRSPAA++GLILLLL+I MAISAG +YPRDPLALAGRPLIWPFSNPRFLLGTD Sbjct: 1 MDTLKRYFRSPAAIVGLILLLLIIGMAISAGWIYPRDPLALAGRPLIWPFSNPRFLLGTD 60 Query: 61 NSGRDIAAQIFYGARISLLIGGVATVIAILIGILVGAFAGYYGGWVDNVLMRITEAFQTL 120 NSGRDIAAQIF+GARI+LLIGG ATVIAILIG+L+GAFAGY+GGWVD VLMRITEAFQTL Sbjct: 61 NSGRDIAAQIFHGARIALLIGGAATVIAILIGVLIGAFAGYFGGWVDTVLMRITEAFQTL 120 Query: 121 PNFVLLLVLVAVFGSTLTTVTIAVGVVSWPAPARLTRAEFLSLRNREFVQAGKTLGMKDV 180 PNFVLLLVLVAVFGSTLTTVTIAVG+VSWPAPARLTRAEFLSLRNREFVQAG+TLGMKD+ Sbjct: 121 PNFVLLLVLVAVFGSTLTTVTIAVGIVSWPAPARLTRAEFLSLRNREFVQAGRTLGMKDL 180 Query: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ Sbjct: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 Query: 241 WYVSAIPGIAILVTVLAVSLVGQGLNDALNPRLKSR 276 WYV+AIPGIAIL+TVLAVSLVGQGLNDALNPRLK R Sbjct: 241 WYVAAIPGIAILITVLAVSLVGQGLNDALNPRLKGR 276 >ref|YP_568289.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] gb|ABE38388.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] Length = 276 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 252/276 (91%), Positives = 269/276 (97%) Query: 1 MDAVKRYFRSPAAVIGLILLLLVIAMAISAGLLYPRDPLALAGRPLIWPFSNPRFLLGTD 60 MDA+KRYFRSPAA++GLILLLLVI MAISAG LYPRDPL+LAGRPLIWPFSNPRFLLGTD Sbjct: 1 MDAIKRYFRSPAAIVGLILLLLVIGMAISAGWLYPRDPLSLAGRPLIWPFSNPRFLLGTD 60 Query: 61 NSGRDIAAQIFYGARISLLIGGVATVIAILIGILVGAFAGYYGGWVDNVLMRITEAFQTL 120 NSGRDIAAQIF+GARI+LLIGG AT IA+LIG+L+GAFAGY+GGW+D VLMRITEAFQ L Sbjct: 61 NSGRDIAAQIFHGARIALLIGGAATAIAVLIGVLIGAFAGYFGGWIDTVLMRITEAFQIL 120 Query: 121 PNFVLLLVLVAVFGSTLTTVTIAVGVVSWPAPARLTRAEFLSLRNREFVQAGKTLGMKDV 180 PNFVLLLVLVAVFGSTLTTVTIAVG+VSWPAPARLTRAEFLSLRNREFVQAG+TLGMKD+ Sbjct: 121 PNFVLLLVLVAVFGSTLTTVTIAVGIVSWPAPARLTRAEFLSLRNREFVQAGRTLGMKDL 180 Query: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ Sbjct: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 Query: 241 WYVSAIPGIAILVTVLAVSLVGQGLNDALNPRLKSR 276 WYV+AIPG+AIL+TVLAVSLVGQGLNDALNPRLK R Sbjct: 241 WYVAAIPGLAILITVLAVSLVGQGLNDALNPRLKGR 276 >ref|YP_001205941.1| putative ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL77716.1| putative ABC transporter, permease protein [Bradyrhizobium sp. ORS 278] Length = 276 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 249/276 (90%), Positives = 266/276 (96%) Query: 1 MDAVKRYFRSPAAVIGLILLLLVIAMAISAGLLYPRDPLALAGRPLIWPFSNPRFLLGTD 60 MDAVKRYFRSPAAV+GL+LLL+VI MA+SAG YPRDPLALAGRPL+WPF+NPRFLLGTD Sbjct: 1 MDAVKRYFRSPAAVLGLVLLLIVIGMALSAGYFYPRDPLALAGRPLVWPFANPRFLLGTD 60 Query: 61 NSGRDIAAQIFYGARISLLIGGVATVIAILIGILVGAFAGYYGGWVDNVLMRITEAFQTL 120 NSGRDIAAQIF+GARISLLIGGVAT+IA+ IG+LVGA AGYYGGW+DN+LMRITEAFQTL Sbjct: 61 NSGRDIAAQIFHGARISLLIGGVATLIAVTIGVLVGALAGYYGGWIDNILMRITEAFQTL 120 Query: 121 PNFVLLLVLVAVFGSTLTTVTIAVGVVSWPAPARLTRAEFLSLRNREFVQAGKTLGMKDV 180 PNFVLLLVLVAVFGSTLTTVTIAVG+VSWPAPARLTRAEFLSLR+REFVQAG+TLGM+D Sbjct: 121 PNFVLLLVLVAVFGSTLTTVTIAVGIVSWPAPARLTRAEFLSLRSREFVQAGRTLGMRDA 180 Query: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 QLIL EILPNALPPVIVYA VVMAVAILLESALAFLRLSD NVASWGNLIGLGRDVLRVQ Sbjct: 181 QLILREILPNALPPVIVYAGVVMAVAILLESALAFLRLSDANVASWGNLIGLGRDVLRVQ 240 Query: 241 WYVSAIPGIAILVTVLAVSLVGQGLNDALNPRLKSR 276 WYVSAIPG+AILVTVLAVSLVGQGLNDALNPRLK R Sbjct: 241 WYVSAIPGVAILVTVLAVSLVGQGLNDALNPRLKQR 276 >ref|YP_484660.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gb|ABD05749.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 276 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 250/276 (90%), Positives = 268/276 (97%) Query: 1 MDAVKRYFRSPAAVIGLILLLLVIAMAISAGLLYPRDPLALAGRPLIWPFSNPRFLLGTD 60 MDA+KRYFRSPAA++GL+LLL+VI MAISAG YPRDPL+LAGRPLIWPFSNPRFLLGTD Sbjct: 1 MDAIKRYFRSPAAIVGLLLLLVVIGMAISAGWFYPRDPLSLAGRPLIWPFSNPRFLLGTD 60 Query: 61 NSGRDIAAQIFYGARISLLIGGVATVIAILIGILVGAFAGYYGGWVDNVLMRITEAFQTL 120 NSGRDIAAQIF+GARI+LLIGG ATVIA++IG+L+GAFAGY+GG VD VLMRITEAFQ L Sbjct: 61 NSGRDIAAQIFHGARIALLIGGAATVIAVVIGVLIGAFAGYFGGIVDTVLMRITEAFQIL 120 Query: 121 PNFVLLLVLVAVFGSTLTTVTIAVGVVSWPAPARLTRAEFLSLRNREFVQAGKTLGMKDV 180 PNFVLLLVLVAVFGSTLTTVTIAVG+VSWPAPARLTRAEFLSLRNREFVQAG+TLGMKD+ Sbjct: 121 PNFVLLLVLVAVFGSTLTTVTIAVGIVSWPAPARLTRAEFLSLRNREFVQAGRTLGMKDL 180 Query: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ Sbjct: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 Query: 241 WYVSAIPGIAILVTVLAVSLVGQGLNDALNPRLKSR 276 WYV+AIPGIAIL+TVLAVSLVGQGLNDALNPRLK R Sbjct: 241 WYVAAIPGIAILLTVLAVSLVGQGLNDALNPRLKGR 276 >ref|YP_001240281.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ36375.1| putative ABC transporter, permease protein [Bradyrhizobium sp. BTAi1] Length = 276 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 247/276 (89%), Positives = 266/276 (96%) Query: 1 MDAVKRYFRSPAAVIGLILLLLVIAMAISAGLLYPRDPLALAGRPLIWPFSNPRFLLGTD 60 MDA+KRYFRSPAAV+GL+LLL+V+ MAISAG LYPRDPLALAGRPL+WPF+NPRFLLGTD Sbjct: 1 MDALKRYFRSPAAVLGLVLLLIVVGMAISAGYLYPRDPLALAGRPLVWPFTNPRFLLGTD 60 Query: 61 NSGRDIAAQIFYGARISLLIGGVATVIAILIGILVGAFAGYYGGWVDNVLMRITEAFQTL 120 NSGRDIAAQIF+GARISLLIGGVAT+IA+ IG++VGA AGYYGGW+DN+LMRITEAFQTL Sbjct: 61 NSGRDIAAQIFHGARISLLIGGVATLIAVTIGVMVGAIAGYYGGWIDNILMRITEAFQTL 120 Query: 121 PNFVLLLVLVAVFGSTLTTVTIAVGVVSWPAPARLTRAEFLSLRNREFVQAGKTLGMKDV 180 PNFVLLLVLVAVFGSTLTTVTIAVG+VSWPAPARLTRAEFLSLR+REFVQAG+TLGM D Sbjct: 121 PNFVLLLVLVAVFGSTLTTVTIAVGIVSWPAPARLTRAEFLSLRSREFVQAGRTLGMPDA 180 Query: 181 QLILGEILPNALPPVIVYASVVMAVAILLESALAFLRLSDPNVASWGNLIGLGRDVLRVQ 240 QLIL EILPNALPPVIVYA VVMAVAILLESALAFLRLSD NVASWGNLIGLGRDVLRVQ Sbjct: 181 QLILREILPNALPPVIVYAGVVMAVAILLESALAFLRLSDANVASWGNLIGLGRDVLRVQ 240 Query: 241 WYVSAIPGIAILVTVLAVSLVGQGLNDALNPRLKSR 276 WYVSAIPG+AIL+TVLAVSLVGQGLNDALNPRLK R Sbjct: 241 WYVSAIPGVAILITVLAVSLVGQGLNDALNPRLKQR 276