BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0113.p (541 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_947985.1| putative ABC transporter ATP-binding protein [R... 841 0.0 ref|YP_001991898.1| ABC transporter [Rhodopseudomonas palustris ... 835 0.0 ref|YP_484659.1| ABC transporter related [Rhodopseudomonas palus... 829 0.0 ref|YP_568288.1| ABC transporter-like protein [Rhodopseudomonas ... 818 0.0 ref|YP_001205942.1| putative ABC transporter ATP-binding protein... 800 0.0 >ref|NP_947985.1| putative ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] emb|CAE28084.1| putative ABC transporter ATP-binding protein [Rhodopseudomonas palustris CGA009] Length = 540 Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/532 (80%), Positives = 469/532 (88%) Query: 5 VLSLDGLTVRLPKGADRPHALSDVSLSIASNEILCVVGESGSGKSMMANAIMRLLPNELT 64 VL+LD L+VRLP GADR HA+ D SL IA+ EILCVVGESGSGKS+MANA+M+LLP +T Sbjct: 6 VLTLDKLSVRLPAGADRSHAVRDASLMIAAGEILCVVGESGSGKSIMANAVMQLLPGGVT 65 Query: 65 IERGRMMFDGRDLCAADSAEMRDVRGAGIAMIFQEPMTALNPLRTIGDQIGEMFAIHTAL 124 ++ GR++F+GRDL A +AEMR VRGAGIAM+FQEPMTALNPLRTIGDQIGEMF+IHT L Sbjct: 66 LDGGRVLFEGRDLAQASAAEMRKVRGAGIAMVFQEPMTALNPLRTIGDQIGEMFSIHTDL 125 Query: 125 SKAEINARVLALLEDVRIPDSRAAAKAYPHELSGGQRQRVMIAMALALDPKLLIADEPTT 184 SK +I ++VLALL DVRIPD AA AYPHELSGGQRQR MIAMALALDPKLLIADEPTT Sbjct: 126 SKRDIRSKVLALLTDVRIPDPARAAGAYPHELSGGQRQRAMIAMALALDPKLLIADEPTT 185 Query: 185 ALDVTTQAQILKLIRDLQQRKKTAVLFITHDFGVVAEIADRVVVMQHGAIVEQGAADKVL 244 ALDVTTQAQIL LIR+LQ R+ TAVLFITHDFGVVAEIADRVVVMQHG IVEQG AD VL Sbjct: 186 ALDVTTQAQILTLIRELQSRRNTAVLFITHDFGVVAEIADRVVVMQHGVIVEQGQADDVL 245 Query: 245 NDPQHAYTKQLIAAVPPLKAPPPRILSGKDILTIDGVSKTYRTGGFLGRGARITEAVRNV 304 N PQHAYT+QLIAAVPPL APPPR IL+ID VSKT+RTGGFLGRGAR+T+AV+NV Sbjct: 246 NRPQHAYTRQLIAAVPPLTAPPPRPFGSDTILSIDNVSKTFRTGGFLGRGARVTDAVKNV 305 Query: 305 SLHLPRGATLGIVGESGSGKSTLARCIVRLIDPDTGSIVLDGKDWAKLGRDAIRRETRHF 364 SL LP+GATLGIVGESGSGKSTLARCI+RL+DPD GSI+LDG+DWA + R+ +RRETRH Sbjct: 306 SLKLPKGATLGIVGESGSGKSTLARCIIRLLDPDAGSILLDGRDWATMPREQVRRETRHM 365 Query: 365 QMVFQDPFASLNPRRKAAELVAQGPIVHGTDHATAIAEARKLFELVGLDPSAGDRYPHEF 424 QMVFQDPFASLNPR KA ELVAQGPI+HGT AIAEARKLFELVGLDP+AGDR PHEF Sbjct: 366 QMVFQDPFASLNPRHKAEELVAQGPIIHGTPRKQAIAEARKLFELVGLDPAAGDRLPHEF 425 Query: 425 SGGQRQRIGLARALALKPDVLVADEPVSALDVSVQAQVLKLLAGLRQQLGLSIIFITHDL 484 SGGQRQRIGLARALALKPDVL+ADE VSALDVSVQAQVLKLL LR+QLGLSIIFITHDL Sbjct: 426 SGGQRQRIGLARALALKPDVLIADEAVSALDVSVQAQVLKLLTDLREQLGLSIIFITHDL 485 Query: 485 RVAAQICDLVAVMKDGAVVEQGLTAEVFGKPQHPYTQDLLSAIPGGAFAREH 536 RVAAQICDLVAVMKDGAVVE G +VF PQHPYTQ LL++IPGG FAR H Sbjct: 486 RVAAQICDLVAVMKDGAVVEHGPAGDVFNAPQHPYTQALLASIPGGDFARCH 537 >ref|YP_001991898.1| ABC transporter [Rhodopseudomonas palustris TIE-1] gb|ACF01423.1| ABC transporter related [Rhodopseudomonas palustris TIE-1] Length = 540 Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/532 (79%), Positives = 467/532 (87%) Query: 5 VLSLDGLTVRLPKGADRPHALSDVSLSIASNEILCVVGESGSGKSMMANAIMRLLPNELT 64 VL+LD ++VRLP GADR HA+ D SL+IA+ EILCVVGESGSGKS+MANA+M+LLP + Sbjct: 6 VLTLDKVSVRLPAGADRSHAVRDASLTIAAGEILCVVGESGSGKSIMANAVMQLLPGGVA 65 Query: 65 IERGRMMFDGRDLCAADSAEMRDVRGAGIAMIFQEPMTALNPLRTIGDQIGEMFAIHTAL 124 ++ G ++F GRDL A +AEMR VRGAGIAM+FQEPMTALNPLRTIGDQIGEMF+IHT L Sbjct: 66 LDGGCVLFKGRDLAQASAAEMRKVRGAGIAMVFQEPMTALNPLRTIGDQIGEMFSIHTDL 125 Query: 125 SKAEINARVLALLEDVRIPDSRAAAKAYPHELSGGQRQRVMIAMALALDPKLLIADEPTT 184 SK +I ++VLALL DVRIPD AA AYPHELSGGQRQR MIAMALALDPKLLIADEPTT Sbjct: 126 SKRDIKSKVLALLTDVRIPDPARAAGAYPHELSGGQRQRAMIAMALALDPKLLIADEPTT 185 Query: 185 ALDVTTQAQILKLIRDLQQRKKTAVLFITHDFGVVAEIADRVVVMQHGAIVEQGAADKVL 244 ALDVTTQAQIL LIR+LQ R+ TAVLFITHDFGVVAEIADRVVVMQHG IVEQG AD VL Sbjct: 186 ALDVTTQAQILTLIRELQSRRNTAVLFITHDFGVVAEIADRVVVMQHGVIVEQGQADDVL 245 Query: 245 NDPQHAYTKQLIAAVPPLKAPPPRILSGKDILTIDGVSKTYRTGGFLGRGARITEAVRNV 304 N PQHAYT+QLIAAVPPL APPPR IL+ID VSKT+RTGGFLGRGAR+T+AV+NV Sbjct: 246 NRPQHAYTRQLIAAVPPLTAPPPRPFGSDTILSIDNVSKTFRTGGFLGRGARVTDAVKNV 305 Query: 305 SLHLPRGATLGIVGESGSGKSTLARCIVRLIDPDTGSIVLDGKDWAKLGRDAIRRETRHF 364 SL LP+GATLGIVGESGSGKSTLARCI+RL+DPD GSI+LDG+DWA + R+ +RRETRH Sbjct: 306 SLKLPKGATLGIVGESGSGKSTLARCIIRLLDPDAGSILLDGRDWATMPREQVRRETRHM 365 Query: 365 QMVFQDPFASLNPRRKAAELVAQGPIVHGTDHATAIAEARKLFELVGLDPSAGDRYPHEF 424 QMVFQDPFASLNPR KA ELVAQGPI+HGT AIAEARKLFELVGLDP+AGDR PHEF Sbjct: 366 QMVFQDPFASLNPRHKAEELVAQGPIIHGTPRKQAIAEARKLFELVGLDPAAGDRLPHEF 425 Query: 425 SGGQRQRIGLARALALKPDVLVADEPVSALDVSVQAQVLKLLAGLRQQLGLSIIFITHDL 484 SGGQRQRIGLARALALKPDVL+ADE VSALDVSVQAQVLKLL LR+QLGLSIIFITHDL Sbjct: 426 SGGQRQRIGLARALALKPDVLIADEAVSALDVSVQAQVLKLLTDLREQLGLSIIFITHDL 485 Query: 485 RVAAQICDLVAVMKDGAVVEQGLTAEVFGKPQHPYTQDLLSAIPGGAFAREH 536 RVAAQICDLVAVMKDGAVVE G +VF PQHPYTQ LL++IPGG FAR H Sbjct: 486 RVAAQICDLVAVMKDGAVVEHGPAGDVFNAPQHPYTQALLASIPGGDFARCH 537 >ref|YP_484659.1| ABC transporter related [Rhodopseudomonas palustris HaA2] gb|ABD05748.1| ABC transporter related [Rhodopseudomonas palustris HaA2] Length = 545 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/539 (78%), Positives = 471/539 (87%), Gaps = 3/539 (0%) Query: 1 MSET---VLSLDGLTVRLPKGADRPHALSDVSLSIASNEILCVVGESGSGKSMMANAIMR 57 M+ET VL+LD L VRLPKGADR HA+ D SL+IA++EILCVVGESGSGKS+MANA+MR Sbjct: 1 MTETKAAVLTLDRLNVRLPKGADRTHAVRDASLTIAADEILCVVGESGSGKSIMANAVMR 60 Query: 58 LLPNELTIERGRMMFDGRDLCAADSAEMRDVRGAGIAMIFQEPMTALNPLRTIGDQIGEM 117 LLP + ++ GR++F+GRDL A +AEMR VRGAGIAM+FQEPMTALNPLR+IGDQIGEM Sbjct: 61 LLPGGVALDGGRVLFEGRDLAQASAAEMRAVRGAGIAMVFQEPMTALNPLRSIGDQIGEM 120 Query: 118 FAIHTALSKAEINARVLALLEDVRIPDSRAAAKAYPHELSGGQRQRVMIAMALALDPKLL 177 F IHT LSK +I A+VLALLEDVRIPD AA AYPHELSGGQRQR MIAMALALDPKLL Sbjct: 121 FRIHTDLSKKDIRAKVLALLEDVRIPDPARAADAYPHELSGGQRQRAMIAMALALDPKLL 180 Query: 178 IADEPTTALDVTTQAQILKLIRDLQQRKKTAVLFITHDFGVVAEIADRVVVMQHGAIVEQ 237 IADEPTTALDVTTQAQIL LIR+LQ R+ TAVLFITHDFGVVAEIADRV VMQHG IVEQ Sbjct: 181 IADEPTTALDVTTQAQILTLIRELQHRRNTAVLFITHDFGVVAEIADRVAVMQHGIIVEQ 240 Query: 238 GAADKVLNDPQHAYTKQLIAAVPPLKAPPPRILSGKDILTIDGVSKTYRTGGFLGRGARI 297 G AD VL+ PQH YT+QLIAAVPPL APPPR ++ + IL ID VSKT+RTGGFLGRGAR+ Sbjct: 241 GTADDVLHRPQHPYTRQLIAAVPPLTAPPPRPIAAETILGIDKVSKTFRTGGFLGRGARV 300 Query: 298 TEAVRNVSLHLPRGATLGIVGESGSGKSTLARCIVRLIDPDTGSIVLDGKDWAKLGRDAI 357 T AV++VSL LPRGATLGIVGESGSGKSTLARCI+RL+DPD GSI+LDG+DWA + R+ + Sbjct: 301 THAVKSVSLQLPRGATLGIVGESGSGKSTLARCIIRLLDPDCGSILLDGRDWATMPREDV 360 Query: 358 RRETRHFQMVFQDPFASLNPRRKAAELVAQGPIVHGTDHATAIAEARKLFELVGLDPSAG 417 RRETRH QMVFQDPFASLNPR KA ELVAQGPI+HGT AIAEAR+LF LVGLDP+AG Sbjct: 361 RRETRHMQMVFQDPFASLNPRHKAEELVAQGPIIHGTPRKQAIAEARELFALVGLDPAAG 420 Query: 418 DRYPHEFSGGQRQRIGLARALALKPDVLVADEPVSALDVSVQAQVLKLLAGLRQQLGLSI 477 DR PHEFSGGQRQRIGLARALALKPDVL+ADE VSALDVSVQAQVL+LLA LR++L LSI Sbjct: 421 DRLPHEFSGGQRQRIGLARALALKPDVLIADEAVSALDVSVQAQVLRLLADLRERLCLSI 480 Query: 478 IFITHDLRVAAQICDLVAVMKDGAVVEQGLTAEVFGKPQHPYTQDLLSAIPGGAFAREH 536 +FITHDLRVAAQICDLVAVMKDG VVE G EVF P+HPYTQ LL++IPGG FAR H Sbjct: 481 VFITHDLRVAAQICDLVAVMKDGEVVEHGPAGEVFNAPKHPYTQALLASIPGGDFARSH 539 >ref|YP_568288.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB5] gb|ABE38387.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 546 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/539 (77%), Positives = 471/539 (87%), Gaps = 3/539 (0%) Query: 1 MSET---VLSLDGLTVRLPKGADRPHALSDVSLSIASNEILCVVGESGSGKSMMANAIMR 57 M+ET VL+LD L+VRLP GADR HA+ D SL+IA++EILCVVGESGSGKS+MANA+M+ Sbjct: 1 MTETKPAVLTLDRLSVRLPGGADRAHAVRDASLTIAADEILCVVGESGSGKSIMANAVMQ 60 Query: 58 LLPNELTIERGRMMFDGRDLCAADSAEMRDVRGAGIAMIFQEPMTALNPLRTIGDQIGEM 117 LLP + ++ GR++F+GRDL A +AEMR VRGAGIAM+FQEPMTALNPLR+IGDQIGEM Sbjct: 61 LLPGGVALDGGRVLFEGRDLAQASAAEMRSVRGAGIAMVFQEPMTALNPLRSIGDQIGEM 120 Query: 118 FAIHTALSKAEINARVLALLEDVRIPDSRAAAKAYPHELSGGQRQRVMIAMALALDPKLL 177 F IHT LSK EI A+VLALLEDVRIPD A AYPHELSGGQRQR MIAMALALDPKLL Sbjct: 121 FRIHTRLSKQEIRAKVLALLEDVRIPDPPRTADAYPHELSGGQRQRAMIAMALALDPKLL 180 Query: 178 IADEPTTALDVTTQAQILKLIRDLQQRKKTAVLFITHDFGVVAEIADRVVVMQHGAIVEQ 237 IADEPTTALDVTTQAQIL LIR+LQ R+ TAVLFITHDFGVVAEIADRV VMQ G IVEQ Sbjct: 181 IADEPTTALDVTTQAQILTLIRELQHRRNTAVLFITHDFGVVAEIADRVAVMQRGVIVEQ 240 Query: 238 GAADKVLNDPQHAYTKQLIAAVPPLKAPPPRILSGKDILTIDGVSKTYRTGGFLGRGARI 297 GAAD VL+ PQH YT++LIAAVPPL APPPR +S + IL I V+KT+RTGGFLGRGAR+ Sbjct: 241 GAADAVLHRPQHPYTRKLIAAVPPLTAPPPRPISTETILDIADVTKTFRTGGFLGRGARV 300 Query: 298 TEAVRNVSLHLPRGATLGIVGESGSGKSTLARCIVRLIDPDTGSIVLDGKDWAKLGRDAI 357 T+AV++VSL LPRGATLGIVGESGSGKSTLARCI+RL+DPD GSI+L+G+DWA + R+ + Sbjct: 301 TDAVKSVSLKLPRGATLGIVGESGSGKSTLARCIIRLLDPDGGSILLEGRDWATMPREQV 360 Query: 358 RRETRHFQMVFQDPFASLNPRRKAAELVAQGPIVHGTDHATAIAEARKLFELVGLDPSAG 417 RRETRH QMVFQDPFASLNPR KA ELVAQGPI+HGT A AI EAR+LF LVGLDP++G Sbjct: 361 RRETRHMQMVFQDPFASLNPRHKAEELVAQGPIIHGTPRAQAIREARELFALVGLDPASG 420 Query: 418 DRYPHEFSGGQRQRIGLARALALKPDVLVADEPVSALDVSVQAQVLKLLAGLRQQLGLSI 477 DR PHEFSGGQRQRIGLARALALKPDVL+ADE VSALDVSVQAQVL+LLA LR++LGLSI Sbjct: 421 DRLPHEFSGGQRQRIGLARALALKPDVLIADEAVSALDVSVQAQVLRLLANLRERLGLSI 480 Query: 478 IFITHDLRVAAQICDLVAVMKDGAVVEQGLTAEVFGKPQHPYTQDLLSAIPGGAFAREH 536 +FITHDLRVAAQICDLVAVMK+G VVE G EVF P+HPYTQ LL++IPGG FAR H Sbjct: 481 VFITHDLRVAAQICDLVAVMKNGEVVEHGPAGEVFNAPKHPYTQALLASIPGGDFARSH 539 >ref|YP_001205942.1| putative ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL77717.1| putative ABC transporter, ATP-binding protein [Bradyrhizobium sp. ORS 278] Length = 544 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/530 (78%), Positives = 467/530 (88%) Query: 5 VLSLDGLTVRLPKGADRPHALSDVSLSIASNEILCVVGESGSGKSMMANAIMRLLPNELT 64 +L++D L+VRLPKGADR HA+S+VSLSIA NEI+C+VGESGSGKSMMANAIMRLLP+ +T Sbjct: 7 ILTVDRLSVRLPKGADRVHAISEVSLSIAENEIVCIVGESGSGKSMMANAIMRLLPDGVT 66 Query: 65 IERGRMMFDGRDLCAADSAEMRDVRGAGIAMIFQEPMTALNPLRTIGDQIGEMFAIHTAL 124 + GR++F GRDLC A +A+MR +RGA IAM+FQEPMTALNPLRTIGDQIGEM IHT L Sbjct: 67 TDGGRLLFAGRDLCTASAADMRGIRGAEIAMVFQEPMTALNPLRTIGDQIGEMLEIHTGL 126 Query: 125 SKAEINARVLALLEDVRIPDSRAAAKAYPHELSGGQRQRVMIAMALALDPKLLIADEPTT 184 +KAEI +RV +LL DV IPD AAKAYPHELSGGQRQR MIAMALALDPKLLIADEPTT Sbjct: 127 AKAEIRSRVASLLSDVNIPDPSRAAKAYPHELSGGQRQRAMIAMALALDPKLLIADEPTT 186 Query: 185 ALDVTTQAQILKLIRDLQQRKKTAVLFITHDFGVVAEIADRVVVMQHGAIVEQGAADKVL 244 ALDVTTQAQILKLIR+LQQR+ TAVLFITHDFGVVAE+ADRVVVMQHG +VE G A VL Sbjct: 187 ALDVTTQAQILKLIRELQQRRGTAVLFITHDFGVVAEMADRVVVMQHGVVVEHGPARDVL 246 Query: 245 NDPQHAYTKQLIAAVPPLKAPPPRILSGKDILTIDGVSKTYRTGGFLGRGARITEAVRNV 304 +PQH YT+QLIAAVPP+ APPPR LSG+ IL + GV+KTYRTGGFLGRG R+T AV++V Sbjct: 247 RNPQHPYTRQLIAAVPPVAAPPPRQLSGETILALSGVTKTYRTGGFLGRGERVTHAVKDV 306 Query: 305 SLHLPRGATLGIVGESGSGKSTLARCIVRLIDPDTGSIVLDGKDWAKLGRDAIRRETRHF 364 SL LP+GATLGIVGESGSGKSTLARCI+RL+DPD GSIVL+G+DWA+L R IR T+ Sbjct: 307 SLTLPKGATLGIVGESGSGKSTLARCIIRLLDPDAGSIVLEGQDWARLSRSEIRGRTQQM 366 Query: 365 QMVFQDPFASLNPRRKAAELVAQGPIVHGTDHATAIAEARKLFELVGLDPSAGDRYPHEF 424 QMVFQDPFASLNPRRKA ELVAQGPIVHGT A+AEAR+LF LVGLDP+A +R+PHEF Sbjct: 367 QMVFQDPFASLNPRRKAVELVAQGPIVHGTPRDQALAEARELFGLVGLDPAAAERFPHEF 426 Query: 425 SGGQRQRIGLARALALKPDVLVADEPVSALDVSVQAQVLKLLAGLRQQLGLSIIFITHDL 484 SGGQRQRIGLARALALKP VLVADEPVSALDVSVQAQVL+LL LR +LGLSIIFITHDL Sbjct: 427 SGGQRQRIGLARALALKPTVLVADEPVSALDVSVQAQVLRLLTDLRARLGLSIIFITHDL 486 Query: 485 RVAAQICDLVAVMKDGAVVEQGLTAEVFGKPQHPYTQDLLSAIPGGAFAR 534 RVAAQICDLVAVMKDGAVVE G T++VFG P+H YTQ LL+AIPGG FAR Sbjct: 487 RVAAQICDLVAVMKDGAVVEHGATSDVFGSPRHSYTQALLAAIPGGDFAR 536