BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0106.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769370.1| ABC transporter permease [Bradyrhizobium japoni... 457 e-126 ref|YP_001237870.1| ABC transporter permease [Bradyrhizobium sp.... 457 e-126 ref|YP_001207891.1| ABC transporter permease [Bradyrhizobium sp.... 449 e-124 ref|NP_355452.1| ABC transporter, membrane spanning protein (sug... 379 e-103 gb|EGP57942.1| ABC transporter, membrane spanning protein (sugar... 378 e-103 >ref|NP_769370.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] dbj|BAC47995.1| bll2730 [Bradyrhizobium japonicum USDA 110] Length = 312 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 235/271 (86%), Positives = 250/271 (92%) Query: 28 NASKQESRAAGSGDVAPAREWRPPSYWPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVGS 87 +A Q AA D AP +E RPPSYWPFV+PALVVVLA+IIFPWVFTIWMSL EWKVGS Sbjct: 2 SALTQADPAAARSDAAPEKELRPPSYWPFVVPALVVVLAIIIFPWVFTIWMSLNEWKVGS 61 Query: 88 PTVFVGLANYLRLPTDPRFVEAVGHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLRG 147 PT FVGL+NYLRL +DPRF+EAVGHT+ YTALSV+LPLV GT AAVVFHQKFA RGFLRG Sbjct: 62 PTTFVGLSNYLRLTSDPRFIEAVGHTMVYTALSVLLPLVLGTFAAVVFHQKFAGRGFLRG 121 Query: 148 IFIMPMMATPVAIALVWTMMFHPQLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETWQ 207 +FIMPMMATPVAIALVWTMMFHPQLGVLNY+LSLVG+P QLWVF+PATVIPSLVLVETWQ Sbjct: 122 VFIMPMMATPVAIALVWTMMFHPQLGVLNYILSLVGIPAQLWVFHPATVIPSLVLVETWQ 181 Query: 208 WTPLVMLIVLGGLAAIPTEPYESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAVK 267 WTPLVMLIVLGGLAAIPTEPYESAQIDGAN WQ+FRFITLPLIMPFLFIAGMIRMIDAVK Sbjct: 182 WTPLVMLIVLGGLAAIPTEPYESAQIDGANLWQMFRFITLPLIMPFLFIAGMIRMIDAVK 241 Query: 268 SFDIIFAITQGGPGSASETINVYLYSVAFVY 298 SFDIIFAITQGGPGSASETIN+YLYSVAF Y Sbjct: 242 SFDIIFAITQGGPGSASETINIYLYSVAFTY 272 >ref|YP_001237870.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ33964.1| carbohydrate ABC transporter membrane protein 1, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 312 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 223/267 (83%), Positives = 243/267 (91%) Query: 32 QESRAAGSGDVAPAREWRPPSYWPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVGSPTVF 91 ++ A S AP R RPPSYWPFV+PALV VLAVIIFPW+FTIWMS QEWKVGSPT F Sbjct: 6 EQVSGAASEAAAPERALRPPSYWPFVVPALVTVLAVIIFPWLFTIWMSFQEWKVGSPTAF 65 Query: 92 VGLANYLRLPTDPRFVEAVGHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLRGIFIM 151 VGL+NYLRLP DPRFVE+VGHTLSYTALSV+LPLV GTLAAVVFH +F RG LR +FIM Sbjct: 66 VGLSNYLRLPADPRFVESVGHTLSYTALSVLLPLVLGTLAAVVFHARFPGRGLLRALFIM 125 Query: 152 PMMATPVAIALVWTMMFHPQLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETWQWTPL 211 PMMATPVAIALVWTMMFHPQLG+LNY+LSLVGLPPQLWVF+P TVIPSLVLVETWQWTPL Sbjct: 126 PMMATPVAIALVWTMMFHPQLGILNYLLSLVGLPPQLWVFHPGTVIPSLVLVETWQWTPL 185 Query: 212 VMLIVLGGLAAIPTEPYESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAVKSFDI 271 VMLIVLGG+A++PTEPYESAQIDGA+ WQ+FR+ITLPLIMPFLFIA MIR IDA+KSFDI Sbjct: 186 VMLIVLGGIASLPTEPYESAQIDGASTWQMFRYITLPLIMPFLFIAAMIRAIDAIKSFDI 245 Query: 272 IFAITQGGPGSASETINVYLYSVAFVY 298 IFAITQGGPGSASETIN+YLYSVAFVY Sbjct: 246 IFAITQGGPGSASETINLYLYSVAFVY 272 >ref|YP_001207891.1| ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL79676.1| Putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS 278] Length = 311 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 219/250 (87%), Positives = 236/250 (94%) Query: 49 RPPSYWPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVGSPTVFVGLANYLRLPTDPRFVE 108 RPPSYWPFV+PALV VLAVIIFPW+FTIWMS QEWKVGSPT FVGLANYLRLPTDPRFVE Sbjct: 22 RPPSYWPFVVPALVTVLAVIIFPWLFTIWMSFQEWKVGSPTTFVGLANYLRLPTDPRFVE 81 Query: 109 AVGHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLRGIFIMPMMATPVAIALVWTMMF 168 AVGHTLSYTALSV+LPLV GT AAV+FH +F RG LR +FIMPMMATPVAIALVWTMMF Sbjct: 82 AVGHTLSYTALSVLLPLVLGTFAAVLFHARFPGRGLLRALFIMPMMATPVAIALVWTMMF 141 Query: 169 HPQLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETWQWTPLVMLIVLGGLAAIPTEPY 228 HPQLG+LNY+LSLVGLPPQLWVF+P TVIPSLVLVETWQWTPLVMLIVLGG+A++PTEPY Sbjct: 142 HPQLGILNYLLSLVGLPPQLWVFHPGTVIPSLVLVETWQWTPLVMLIVLGGIASLPTEPY 201 Query: 229 ESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAVKSFDIIFAITQGGPGSASETIN 288 ESAQIDGA+ WQ+FR+ITLPLIMPFLFIA MIR IDA+KSFDIIFAITQGGPGSASETIN Sbjct: 202 ESAQIDGASTWQMFRYITLPLIMPFLFIAAMIRAIDAIKSFDIIFAITQGGPGSASETIN 261 Query: 289 VYLYSVAFVY 298 +YLYSVAFVY Sbjct: 262 LYLYSVAFVY 271 >ref|NP_355452.1| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] gb|AAK88237.1| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens str. C58] Length = 312 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/272 (69%), Positives = 221/272 (81%), Gaps = 5/272 (1%) Query: 27 ENASKQESRAAGSGDVAPAREWRPPSYWPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVG 86 EN SRA GS P R P+YWPFVIPALVV+ AVI+FPWVFT+WMS+ W +G Sbjct: 7 ENTKTGVSRAEGS---RPPR--LAPNYWPFVIPALVVISAVIVFPWVFTLWMSVHRWTLG 61 Query: 87 SPTVFVGLANYLRLPTDPRFVEAVGHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLR 146 F+G NY+RL +D RF E++ HTL YT LSVV PL GTLAA+VF +F RGFLR Sbjct: 62 QEQSFIGFDNYIRLASDLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLR 121 Query: 147 GIFIMPMMATPVAIALVWTMMFHPQLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETW 206 G+F+MPMMATPVAIALVWTMMFHPQLGVLNY+LSL+G+ P W++N +TVIPSLVLVETW Sbjct: 122 GVFVMPMMATPVAIALVWTMMFHPQLGVLNYLLSLIGIGPLEWIYNQSTVIPSLVLVETW 181 Query: 207 QWTPLVMLIVLGGLAAIPTEPYESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAV 266 QWTPLVMLIVLGGLAA+P EPYESA+IDGAN WQ FR++T+P+I PFL IA +IR IDAV Sbjct: 182 QWTPLVMLIVLGGLAAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAV 241 Query: 267 KSFDIIFAITQGGPGSASETINVYLYSVAFVY 298 KSFDII+A+TQGGPG+ASETIN+YLY+ AF Y Sbjct: 242 KSFDIIYAMTQGGPGTASETINIYLYNTAFSY 273 >gb|EGP57942.1| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens F2] Length = 312 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 187/272 (68%), Positives = 219/272 (80%), Gaps = 5/272 (1%) Query: 27 ENASKQESRAAGSGDVAPAREWRPPSYWPFVIPALVVVLAVIIFPWVFTIWMSLQEWKVG 86 EN SR GS PAR P+YWPFVIPALVV+ AVI+FPWVFT+WMS W +G Sbjct: 7 ENTKTGVSRKEGS---RPAR--LAPNYWPFVIPALVVISAVIVFPWVFTLWMSAHRWTLG 61 Query: 87 SPTVFVGLANYLRLPTDPRFVEAVGHTLSYTALSVVLPLVFGTLAAVVFHQKFAARGFLR 146 F+G NY+RL +D RF E++ HTL YT LSVV PL GTLAA+VF +F RGFLR Sbjct: 62 QEQSFIGFENYIRLASDGRFWESLWHTLIYTVLSVVTPLFLGTLAALVFDAQFPLRGFLR 121 Query: 147 GIFIMPMMATPVAIALVWTMMFHPQLGVLNYVLSLVGLPPQLWVFNPATVIPSLVLVETW 206 G+F+MPMMATPVAIALVWTMMFHPQLGVLNY+LS +G+ P W++N +TVIPSLVLVETW Sbjct: 122 GVFVMPMMATPVAIALVWTMMFHPQLGVLNYLLSFIGIGPLEWIYNQSTVIPSLVLVETW 181 Query: 207 QWTPLVMLIVLGGLAAIPTEPYESAQIDGANFWQVFRFITLPLIMPFLFIAGMIRMIDAV 266 QWTPLVMLIVLGGLAA+P EPYESA+IDGAN WQ FR++T+P+I PFL IA +IR IDAV Sbjct: 182 QWTPLVMLIVLGGLAAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAV 241 Query: 267 KSFDIIFAITQGGPGSASETINVYLYSVAFVY 298 KSFDII+A+TQGGPG+ASETIN+YLY+ AF Y Sbjct: 242 KSFDIIYAMTQGGPGTASETINIYLYNTAFAY 273