BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0105.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769369.1| ABC transporter permease [Bradyrhizobium japoni... 510 e-143 ref|YP_001237869.1| putative ABC transporter permease [Bradyrhiz... 483 e-134 ref|YP_001207892.1| putative ABC transporter permease [Bradyrhiz... 481 e-134 gb|EGP57943.1| ABC transporter, membrane spanning protein (sugar... 420 e-115 ref|YP_002542354.1| sugar ABC transporter [Agrobacterium radioba... 420 e-115 >ref|NP_769369.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] dbj|BAC47994.1| bll2729 [Bradyrhizobium japonicum USDA 110] Length = 282 Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust. Identities = 259/274 (94%), Positives = 265/274 (96%) Query: 1 MNPRQILGRIGLWLSVFVIVSPAILFFLWMASLSLKFEIDNASYPPVFFPEHIAWKNYAD 60 M PRQI+G+IGLWLSVFVIVSPAILFFLWM SLSLKFEIDNA+YPPVFFPEHIAWKNYAD Sbjct: 9 MTPRQIIGKIGLWLSVFVIVSPAILFFLWMLSLSLKFEIDNAAYPPVFFPEHIAWKNYAD 68 Query: 61 VFASNRFLTYFSNSLVVTGCATGLAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 120 V ASNRFLTYF NSLVVTG AT LA++VGVPAGYGIARMAAHKSAIVILIARITPGLSYL Sbjct: 69 VLASNRFLTYFINSLVVTGSATALALIVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 128 Query: 121 IPLFLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTPPELEEAALIDGATRWQV 180 IPLFLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTP ELEEAALIDGATRWQV Sbjct: 129 IPLFLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTPLELEEAALIDGATRWQV 188 Query: 181 FRHVALPIAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 240 FRHVALPIAKPG+AVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL Sbjct: 189 FRHVALPIAKPGIAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 248 Query: 241 AAAALIVTAPVLLLTVMAQRQIVAGLTAGAVKGG 274 AAAALIVT PVLLLTV AQRQIVAGLTAGAVKGG Sbjct: 249 AAAALIVTLPVLLLTVFAQRQIVAGLTAGAVKGG 282 >ref|YP_001237869.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ33963.1| carbohydrate ABC transporter membrane protein 2, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 274 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 246/274 (89%), Positives = 256/274 (93%) Query: 1 MNPRQILGRIGLWLSVFVIVSPAILFFLWMASLSLKFEIDNASYPPVFFPEHIAWKNYAD 60 M+ ILGR+GL L VF+IVSPAILFFLWM SLS+KFE+DNA+YPPVF+PEH AWKNY D Sbjct: 1 MSAHTILGRLGLALGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTD 60 Query: 61 VFASNRFLTYFSNSLVVTGCATGLAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 120 V +SNRF TYF NSL+VTG AT LAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL Sbjct: 61 VLSSNRFFTYFKNSLLVTGGATALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 120 Query: 121 IPLFLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTPPELEEAALIDGATRWQV 180 IPLFLLFQWLGLLGTL PQIIIHLVVTVPIVIWIMIGYFETTP ELEEAA IDGATRWQV Sbjct: 121 IPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPIELEEAARIDGATRWQV 180 Query: 181 FRHVALPIAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 240 FRHVALP+AKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL Sbjct: 181 FRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 240 Query: 241 AAAALIVTAPVLLLTVMAQRQIVAGLTAGAVKGG 274 AAAALIVT PVLLLTV AQRQIVAGLTAGAVKGG Sbjct: 241 AAAALIVTLPVLLLTVFAQRQIVAGLTAGAVKGG 274 >ref|YP_001207892.1| putative ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL79677.1| putative ABC transporter (permease protein) [Bradyrhizobium sp. ORS 278] Length = 274 Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust. Identities = 245/274 (89%), Positives = 255/274 (93%) Query: 1 MNPRQILGRIGLWLSVFVIVSPAILFFLWMASLSLKFEIDNASYPPVFFPEHIAWKNYAD 60 M ILGR+GL + VF+IVSPAILFFLWM SLS+KFE+DNA+YPPVF+PEH AWKNY D Sbjct: 1 MTVNTILGRLGLAIGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTD 60 Query: 61 VFASNRFLTYFSNSLVVTGCATGLAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 120 V +SNRF TYF NSL+VTG AT LAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL Sbjct: 61 VLSSNRFFTYFKNSLLVTGGATALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 120 Query: 121 IPLFLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTPPELEEAALIDGATRWQV 180 IPLFLLFQWLGLLGTL PQIIIHLVVTVPIVIWIMIGYFETTP ELEEAA IDGATRWQV Sbjct: 121 IPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPIELEEAARIDGATRWQV 180 Query: 181 FRHVALPIAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 240 FRHVALP+AKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL Sbjct: 181 FRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 240 Query: 241 AAAALIVTAPVLLLTVMAQRQIVAGLTAGAVKGG 274 AAAALIVT PVLLLTV AQRQIVAGLTAGAVKGG Sbjct: 241 AAAALIVTLPVLLLTVTAQRQIVAGLTAGAVKGG 274 >gb|EGP57943.1| ABC transporter, membrane spanning protein (sugar) [Agrobacterium tumefaciens F2] Length = 278 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/271 (76%), Positives = 235/271 (86%) Query: 4 RQILGRIGLWLSVFVIVSPAILFFLWMASLSLKFEIDNASYPPVFFPEHIAWKNYADVFA 63 R+ L RIGL+ V++SP ILFF+WM SLSLK+EIDN +YPP+ PE AW NY VF Sbjct: 8 RKTLDRIGLFFVALVMISPVILFFMWMISLSLKYEIDNGAYPPILIPERFAWSNYVKVFE 67 Query: 64 SNRFLTYFSNSLVVTGCATGLAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYLIPL 123 N F YF NS++VTG AT LA+++GVPAGYGIAR+ A KSA+VI+IAR+TPGLS+LIPL Sbjct: 68 ENNFFLYFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAVVIMIARMTPGLSFLIPL 127 Query: 124 FLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTPPELEEAALIDGATRWQVFRH 183 FLLFQWL LLGTL PQIIIHLVVTVPIV+WIMIGYFETTP ELEEAA IDGA+ WQVFR Sbjct: 128 FLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSWQVFRL 187 Query: 184 VALPIAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPLAAA 243 VALPIAKPG+ V+FILAVIFSWNNFVFGIVLA RETRTLPVAVYNM+SF+Q+SWGPLAAA Sbjct: 188 VALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPLAAA 247 Query: 244 ALIVTAPVLLLTVMAQRQIVAGLTAGAVKGG 274 ALIVT PVLLLT+ AQ+QIVAGLTAGAVKGG Sbjct: 248 ALIVTLPVLLLTMFAQKQIVAGLTAGAVKGG 278 >ref|YP_002542354.1| sugar ABC transporter [Agrobacterium radiobacter K84] gb|ACM30757.1| sugar ABC transporter [Agrobacterium radiobacter K84] Length = 281 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 209/274 (76%), Positives = 236/274 (86%) Query: 1 MNPRQILGRIGLWLSVFVIVSPAILFFLWMASLSLKFEIDNASYPPVFFPEHIAWKNYAD 60 M R+ L +IGL V++SP +LFFLWM SLSLK+EIDN +YPP+F PE AW NY Sbjct: 8 MMKRKTLDKIGLLFVALVMISPVVLFFLWMISLSLKYEIDNGAYPPIFIPERFAWSNYVK 67 Query: 61 VFASNRFLTYFSNSLVVTGCATGLAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL 120 VF N F YF NS++VTG AT LA+L+GVPAGYGIAR+ A +SA+VI+IAR+TPGLS+L Sbjct: 68 VFEENNFFLYFWNSILVTGAATLLALLIGVPAGYGIARLKAERSAVVIMIARMTPGLSFL 127 Query: 121 IPLFLLFQWLGLLGTLVPQIIIHLVVTVPIVIWIMIGYFETTPPELEEAALIDGATRWQV 180 IPLFLLFQWL LLGTL PQIIIHLVVTVPIV+WIMIGYFETTP ELEEAA IDGAT WQV Sbjct: 128 IPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPMELEEAASIDGATPWQV 187 Query: 181 FRHVALPIAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL 240 FR VALPIAKPG+ VAFIL+VIFSWNNFVFGIVLA RETRTLPVAVYNM+SF+Q+SWGPL Sbjct: 188 FRLVALPIAKPGIVVAFILSVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWGPL 247 Query: 241 AAAALIVTAPVLLLTVMAQRQIVAGLTAGAVKGG 274 AAAALIVT PVL+LT+ AQ+QIVAGLTAGAVKGG Sbjct: 248 AAAALIVTLPVLVLTIFAQKQIVAGLTAGAVKGG 281