BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0102.p         (225 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769365.1| hypothetical protein blr2725 [Bradyrhizobium ja...   401   e-110
ref|YP_001204464.1| putative isochorismatase [Bradyrhizobium sp....   394   e-108
ref|YP_001238797.1| putative isochorismatase [Bradyrhizobium sp....   384   e-105
ref|YP_484638.1| isochorismatase hydrolase [Rhodopseudomonas pal...   372   e-101
ref|ZP_08628165.1| isochorismatase [Bradyrhizobiaceae bacterium ...   372   e-101

>ref|NP_769365.1| hypothetical protein blr2725 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47990.1| blr2725 [Bradyrhizobium japonicum USDA 110]
          Length = 233

 Score =  401 bits (1031), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/227 (86%), Positives = 206/227 (90%), Gaps = 4/227 (1%)

Query: 1   MANSS----GTIAAEPAPITLDWSKTALVIIDMQRDFMERGGFGETLGNDVSRLAGAVKP 56
           M NS+    G I+AEP PI LDW  TAL+IIDMQRDFME GGFGETLGNDVS+LA AVKP
Sbjct: 1   MLNSTKPTLGVISAEPEPIRLDWPATALLIIDMQRDFMEPGGFGETLGNDVSQLARAVKP 60

Query: 57  IAAVLAAARDAGLLVVHTREGHLPDLSDAPPAKLERGAPRLRIGDPGPMGRILIRGEAGH 116
           I AVL AARD G+LV+HTREGHLPDLSDAPPAK+ERGAP LRIGDPGPMGRILIRGEAGH
Sbjct: 61  IGAVLRAARDTGMLVIHTREGHLPDLSDAPPAKVERGAPSLRIGDPGPMGRILIRGEAGH 120

Query: 117 DIIPELYPQGSEIVIDKPGKGAFYATEFGDVLQKYGIENLLVCGVTTEVCVNTTVREAND 176
           DIIPELYP  SE+VIDKPGKGAFYATE  DVL+KYGIENLLVCGVTTEVCVNTTVREAND
Sbjct: 121 DIIPELYPLDSEVVIDKPGKGAFYATELTDVLEKYGIENLLVCGVTTEVCVNTTVREAND 180

Query: 177 RGYRCVVISDGCASYFPEFHEMGLKMIKAQGGIFGWVTDSAAVLEAL 223
           RGYRCVVISDGCASYFPEFHEMGLKMIKAQGGIFGWV DSAAVLEA+
Sbjct: 181 RGYRCVVISDGCASYFPEFHEMGLKMIKAQGGIFGWVADSAAVLEAM 227


>ref|YP_001204464.1| putative isochorismatase [Bradyrhizobium sp. ORS 278]
 emb|CAL76227.1| putative Isochorismatase [Bradyrhizobium sp. ORS 278]
          Length = 228

 Score =  394 bits (1013), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/222 (85%), Positives = 205/222 (92%)

Query: 2   ANSSGTIAAEPAPITLDWSKTALVIIDMQRDFMERGGFGETLGNDVSRLAGAVKPIAAVL 61
           A+++ TI AEP PI LD SKTALVIIDMQRDFME GGFGETLGNDVS+LA AV+PIA VL
Sbjct: 6   ASATATIMAEPEPIALDLSKTALVIIDMQRDFMEPGGFGETLGNDVSQLARAVQPIANVL 65

Query: 62  AAARDAGLLVVHTREGHLPDLSDAPPAKLERGAPRLRIGDPGPMGRILIRGEAGHDIIPE 121
           AAAR AG+LV+HTREGH PDLSDAPPAK+ERGAP LRIGDPGPMGRILIRGEAGHDIIP 
Sbjct: 66  AAARKAGMLVIHTREGHKPDLSDAPPAKVERGAPSLRIGDPGPMGRILIRGEAGHDIIPA 125

Query: 122 LYPQGSEIVIDKPGKGAFYATEFGDVLQKYGIENLLVCGVTTEVCVNTTVREANDRGYRC 181
           LYP   E+VIDKPGKGAFYATE GDVL+++GIENLLVCGVTTEVCVNTTVREANDRGYRC
Sbjct: 126 LYPTDGEVVIDKPGKGAFYATEMGDVLKQHGIENLLVCGVTTEVCVNTTVREANDRGYRC 185

Query: 182 VVISDGCASYFPEFHEMGLKMIKAQGGIFGWVTDSAAVLEAL 223
           VV+SDGCASYFPEFHEMGLKMIKAQGGIFGWV +SAAVL+A+
Sbjct: 186 VVVSDGCASYFPEFHEMGLKMIKAQGGIFGWVAESAAVLKAM 227


>ref|YP_001238797.1| putative isochorismatase [Bradyrhizobium sp. BTAi1]
 gb|ABQ34891.1| putative Isochorismatase [Bradyrhizobium sp. BTAi1]
          Length = 228

 Score =  384 bits (985), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/213 (87%), Positives = 196/213 (92%)

Query: 11  EPAPITLDWSKTALVIIDMQRDFMERGGFGETLGNDVSRLAGAVKPIAAVLAAARDAGLL 70
           EP PITLD S+TALVIIDMQRDFME GGFGETLGNDVS+LA AV PIA VLAAAR  G+L
Sbjct: 15  EPEPITLDLSRTALVIIDMQRDFMEPGGFGETLGNDVSQLARAVAPIANVLAAARKTGML 74

Query: 71  VVHTREGHLPDLSDAPPAKLERGAPRLRIGDPGPMGRILIRGEAGHDIIPELYPQGSEIV 130
           V+HTREGH PDLSDAPPAK+ERGAP LRIGDPGPMGRILIRGEAGHDIIP LYP   E+V
Sbjct: 75  VIHTREGHEPDLSDAPPAKIERGAPSLRIGDPGPMGRILIRGEAGHDIIPALYPIDGEVV 134

Query: 131 IDKPGKGAFYATEFGDVLQKYGIENLLVCGVTTEVCVNTTVREANDRGYRCVVISDGCAS 190
           IDKPGKGAFYATE GDVLQ +GIENLLVCGVTTEVCVNTTVREANDRGYRCVVISDGCAS
Sbjct: 135 IDKPGKGAFYATEMGDVLQHHGIENLLVCGVTTEVCVNTTVREANDRGYRCVVISDGCAS 194

Query: 191 YFPEFHEMGLKMIKAQGGIFGWVTDSAAVLEAL 223
           YFPEFHEMGLKMIKAQGGIFGWV +SAAVL+A+
Sbjct: 195 YFPEFHEMGLKMIKAQGGIFGWVAESAAVLQAI 227


>ref|YP_484638.1| isochorismatase hydrolase [Rhodopseudomonas palustris HaA2]
 gb|ABD05727.1| Isochorismatase hydrolase [Rhodopseudomonas palustris HaA2]
          Length = 233

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/222 (85%), Positives = 200/222 (90%)

Query: 3   NSSGTIAAEPAPITLDWSKTALVIIDMQRDFMERGGFGETLGNDVSRLAGAVKPIAAVLA 62
           ++SGTI AEPAPI LDW  TAL+IIDMQRDF+E GGFGETLGNDVSRL  AV PIAAVLA
Sbjct: 7   SASGTIDAEPAPIALDWVATALLIIDMQRDFLEPGGFGETLGNDVSRLGRAVGPIAAVLA 66

Query: 63  AARDAGLLVVHTREGHLPDLSDAPPAKLERGAPRLRIGDPGPMGRILIRGEAGHDIIPEL 122
           AAR  GLLVVHTREGHLPDL+DAPPAKL RGAP LRIGDPGPMGRILIRGE GHDIIPEL
Sbjct: 67  AARAMGLLVVHTREGHLPDLTDAPPAKLARGAPSLRIGDPGPMGRILIRGEPGHDIIPEL 126

Query: 123 YPQGSEIVIDKPGKGAFYATEFGDVLQKYGIENLLVCGVTTEVCVNTTVREANDRGYRCV 182
           YP+  EIVIDKPGKGAF+ATE  DVLQKYGIENLLVCGVTTEVCVNTTVREANDRGYRCV
Sbjct: 127 YPRDDEIVIDKPGKGAFFATELDDVLQKYGIENLLVCGVTTEVCVNTTVREANDRGYRCV 186

Query: 183 VISDGCASYFPEFHEMGLKMIKAQGGIFGWVTDSAAVLEALA 224
           VI DGCASYFP+FH+ GL MIKAQGGIFGWV DSAAVL A+A
Sbjct: 187 VIGDGCASYFPDFHDAGLAMIKAQGGIFGWVADSAAVLAAMA 228


>ref|ZP_08628165.1| isochorismatase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09074.1| isochorismatase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 232

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/223 (81%), Positives = 194/223 (86%)

Query: 1   MANSSGTIAAEPAPITLDWSKTALVIIDMQRDFMERGGFGETLGNDVSRLAGAVKPIAAV 60
           M  +   +AAEPAP+ L W KTALVIIDMQRDF+E GGFGETLGNDVS+L  AVKP   V
Sbjct: 1   MPPTKNLLAAEPAPLELAWPKTALVIIDMQRDFLEPGGFGETLGNDVSQLTRAVKPCGDV 60

Query: 61  LAAARDAGLLVVHTREGHLPDLSDAPPAKLERGAPRLRIGDPGPMGRILIRGEAGHDIIP 120
           LAA R AGLLVVHTREGHLPDLSDAPPAK+ERGAP LRIGDPGPMGRILIRGEAGHDI+P
Sbjct: 61  LAAFRKAGLLVVHTREGHLPDLSDAPPAKIERGAPSLRIGDPGPMGRILIRGEAGHDIVP 120

Query: 121 ELYPQGSEIVIDKPGKGAFYATEFGDVLQKYGIENLLVCGVTTEVCVNTTVREANDRGYR 180
            LYP   EIVIDKPGKGAFYAT  GD+L+  GIENLLVCGVTTEVCVNTTVREANDRGYR
Sbjct: 121 SLYPIKGEIVIDKPGKGAFYATGLGDILKTRGIENLLVCGVTTEVCVNTTVREANDRGYR 180

Query: 181 CVVISDGCASYFPEFHEMGLKMIKAQGGIFGWVTDSAAVLEAL 223
           CVV++D CASYFPEFHEMGL+MIKAQGGIFGWV+ SA VL AL
Sbjct: 181 CVVLADCCASYFPEFHEMGLRMIKAQGGIFGWVSSSAEVLAAL 223