BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0100.p         (254 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769829.1| hypothetical protein blr3189 [Bradyrhizobium ja...   320   1e-85
ref|YP_003066463.1| hypothetical protein METDI0783 [Methylobacte...   308   7e-82
ref|YP_001922936.1| hypothetical protein Mpop_0213 [Methylobacte...   285   7e-75
ref|YP_002422934.1| hypothetical protein Mchl_4213 [Methylobacte...   283   2e-74
ref|YP_002498929.1| hypothetical protein Mnod_3719 [Methylobacte...   282   3e-74

>ref|NP_769829.1| hypothetical protein blr3189 [Bradyrhizobium japonicum USDA 110]
 sp|Q89QD9.1|Y3189_BRAJA RecName: Full=UPF0324 membrane protein blr3189
 dbj|BAC48454.1| blr3189 [Bradyrhizobium japonicum USDA 110]
          Length = 352

 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 181/248 (72%), Positives = 213/248 (85%), Gaps = 7/248 (2%)

Query: 7   LIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEADGDDIA 66
           L+ +IA  VVI L VS+GLSR+LGL T+L+ILIACGNSICGNSAIAAVAP+I A+ D+IA
Sbjct: 112 LLASIAAVVVIALCVSFGLSRLLGLSTRLSILIACGNSICGNSAIAAVAPIIGANNDEIA 171

Query: 67  SSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGIVSTQIG 126
           SSISFTAILGV+MVLGLPLLIPLL+L+ATQYGILAGLTVYAVPQVLAATVPAG+VSTQIG
Sbjct: 172 SSISFTAILGVMMVLGLPLLIPLLQLSATQYGILAGLTVYAVPQVLAATVPAGLVSTQIG 231

Query: 127 TLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGFLVLAAL 186
           TLVKL+RVLMLGP+V+GLSL+ +R        +  +K  ++  F+LVPWFI+GFL LA L
Sbjct: 232 TLVKLMRVLMLGPVVVGLSLVASR-------WQSDAKKTNVGFFRLVPWFILGFLALATL 284

Query: 187 RSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVTLSLLLLLGLS 246
           RS ++VP   + PVTK  + LTVVSMAALGLGVDVRVL+ VGGRVTAAVTLSL+LLLG+S
Sbjct: 285 RSLEIVPSTVVGPVTKITSFLTVVSMAALGLGVDVRVLANVGGRVTAAVTLSLMLLLGIS 344

Query: 247 IGLVHFFK 254
           I LVH+FK
Sbjct: 345 IALVHWFK 352


>ref|YP_003066463.1| hypothetical protein METDI0783 [Methylobacterium extorquens DM4]
 emb|CAX22419.1| conserved hypothetical protein; putative membrane protein (UPF0324)
           [Methylobacterium extorquens DM4]
          Length = 341

 Score =  308 bits (788), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 184/254 (72%), Positives = 208/254 (81%), Gaps = 3/254 (1%)

Query: 1   VASGGLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEA 60
           VASG +L+ AI  TVV+ +  S+ +SR+LGL  +++ILIACGNSICGNSAIAAVAPVI A
Sbjct: 89  VASGPVLLAAIVATVVVTIMASFAISRLLGLAVRISILIACGNSICGNSAIAAVAPVIGA 148

Query: 61  DGDDIASSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGI 120
             DD+ASSISFTAILGVLMVLGLPLLIPLL L A QYGILAGLTVYAVPQVLAATVPAG+
Sbjct: 149 SSDDVASSISFTAILGVLMVLGLPLLIPLLGLGAGQYGILAGLTVYAVPQVLAATVPAGL 208

Query: 121 VSTQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGF 180
           V+TQIGTLVKLVRVLMLGP+V+GLSLL A R   GAA  G  +     PFKLVPWFI+GF
Sbjct: 209 VATQIGTLVKLVRVLMLGPVVVGLSLL-APRFDGGAAEAGGPR--RFDPFKLVPWFILGF 265

Query: 181 LVLAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVTLSLL 240
           LVLA  RS  LVPD AI P+T+ A  LTVVSMAALGLGVDVRV+  VGGRVTAAVTLSL 
Sbjct: 266 LVLAGCRSLGLVPDAAIGPITRVAGTLTVVSMAALGLGVDVRVIGRVGGRVTAAVTLSLA 325

Query: 241 LLLGLSIGLVHFFK 254
            LL +S+GL+H  +
Sbjct: 326 TLLLISLGLIHLLR 339


>ref|YP_001922936.1| hypothetical protein Mpop_0213 [Methylobacterium populi BJ001]
 gb|ACB78401.1| conserved hypothetical protein [Methylobacterium populi BJ001]
          Length = 350

 Score =  285 bits (728), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 171/235 (72%), Positives = 195/235 (82%), Gaps = 3/235 (1%)

Query: 2   ASGGLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEAD 61
           ASG +L+ AI  TV + +A S+ +SR+LGL  +++ILIACGN+ICGNSAIAAVAPVI A 
Sbjct: 99  ASGPVLLAAIVATVAVTIAASFAISRLLGLAVRMSILIACGNAICGNSAIAAVAPVIGAG 158

Query: 62  GDDIASSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGIV 121
            DDIASSISFTAILGVLMVLGLPLLIPLL L+A QYGILAGLTVYAVPQVLAATVPAG+V
Sbjct: 159 SDDIASSISFTAILGVLMVLGLPLLIPLLGLSAGQYGILAGLTVYAVPQVLAATVPAGLV 218

Query: 122 STQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGFL 181
           +TQIGT+VKLVRVLMLGP+V+GLSLL  R    G    G + A  +  FKLVPWFI+GFL
Sbjct: 219 ATQIGTVVKLVRVLMLGPVVVGLSLLAPR---FGETVAGPNPAGRLRLFKLVPWFILGFL 275

Query: 182 VLAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVT 236
           VLAA RS  LVPD AIAP+T+ A ILTVVSMAALGLGVD+RV+  VG RVTAAVT
Sbjct: 276 VLAACRSLGLVPDPAIAPITRVAGILTVVSMAALGLGVDLRVIGRVGSRVTAAVT 330


>ref|YP_002422934.1| hypothetical protein Mchl_4213 [Methylobacterium chloromethanicum
           CM4]
 gb|ACK85006.1| conserved hypothetical protein [Methylobacterium chloromethanicum
           CM4]
          Length = 356

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/235 (71%), Positives = 193/235 (82%), Gaps = 4/235 (1%)

Query: 2   ASGGLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEAD 61
           ASG +L+ AI  TVV+ +  S+ +SR+LGL  +++ILIACGN+ICGNSAIAAVAPVI A 
Sbjct: 106 ASGPVLLAAIVATVVVTILASFAISRLLGLAMRISILIACGNAICGNSAIAAVAPVIGAS 165

Query: 62  GDDIASSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGIV 121
            DD+ASSISFTAILGVLMVLGLPLLIPLL L A QYGILAGLTVYAVPQVLAATVPAG+ 
Sbjct: 166 SDDVASSISFTAILGVLMVLGLPLLIPLLDLGAGQYGILAGLTVYAVPQVLAATVPAGLA 225

Query: 122 STQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGFL 181
           +TQIGTLVKLVRVLMLGP+V+GLSLL    R  G A  G+ +     PFKLVPWFI+GFL
Sbjct: 226 ATQIGTLVKLVRVLMLGPVVVGLSLLAL--RLGGGAEPGSPR--RFDPFKLVPWFILGFL 281

Query: 182 VLAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVT 236
            LAA RS  LVPD+ + P+T+ A +LTVVSMAALGLGVDVRV+  VGGRVTAAVT
Sbjct: 282 GLAACRSLGLVPDLVVGPITRVAGLLTVVSMAALGLGVDVRVIGRVGGRVTAAVT 336


>ref|YP_002498929.1| hypothetical protein Mnod_3719 [Methylobacterium nodulans ORS 2060]
 gb|ACL58626.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 356

 Score =  282 bits (722), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 159/254 (62%), Positives = 194/254 (76%), Gaps = 2/254 (0%)

Query: 1   VASGGLLIGAIAVTVVIMLAVSYGLSRMLGLKTKLAILIACGNSICGNSAIAAVAPVIEA 60
           VASG  L+  I  TV + +A S+ + R+LGL  ++AIL+ACGN+ICGNSAIAAVAPVI A
Sbjct: 103 VASGPALLTGIVGTVGLAIAASFAICRLLGLPARMAILVACGNAICGNSAIAAVAPVIGA 162

Query: 61  DGDDIASSISFTAILGVLMVLGLPLLIPLLKLTATQYGILAGLTVYAVPQVLAATVPAGI 120
           DG D+A+SI+FTA+LGVLMVLGLPL IPL+ L+  QYG+LAGLTVYAVPQVLAATVP G+
Sbjct: 163 DGKDVAASIAFTAVLGVLMVLGLPLFIPLVGLSEHQYGVLAGLTVYAVPQVLAATVPVGL 222

Query: 121 VSTQIGTLVKLVRVLMLGPIVIGLSLLVARRRKAGAAREGTSKAASISPFKLVPWFIIGF 180
           +STQ+GTLVKLVRVLMLGP+V+  SLL       GA      +A      KLVPWFI+GF
Sbjct: 223 LSTQVGTLVKLVRVLMLGPVVVIFSLLARHLPPEGA--PAPRRAGPPGFTKLVPWFILGF 280

Query: 181 LVLAALRSFQLVPDIAIAPVTKTAAILTVVSMAALGLGVDVRVLSTVGGRVTAAVTLSLL 240
           L LA+ RS  L+P+ A  PVT+ A  LTVVSMAALGLGVD+RVL+ VGGRVT AVT SL 
Sbjct: 281 LALASFRSLGLIPEAASRPVTQLAGYLTVVSMAALGLGVDLRVLARVGGRVTLAVTGSLA 340

Query: 241 LLLGLSIGLVHFFK 254
           +LL +S+ L+   +
Sbjct: 341 VLLAISLVLIWTLR 354