BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0092.p         (93 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_578725.1| Sel1 [Nitrobacter hamburgensis X14] >gi|9180189...   123   1e-26
ref|YP_001242724.1| putative beta-lactamase [Bradyrhizobium sp. ...   119   1e-25
ref|ZP_01045398.1| sel1-like repeat protein [Nitrobacter sp. Nb-...   115   3e-24
ref|YP_534616.1| Sel1-like protein [Rhodopseudomonas palustris B...   108   3e-22
ref|YP_319344.1| Sel1 repeat-containing protein [Nitrobacter win...   107   7e-22

>ref|YP_578725.1| Sel1 [Nitrobacter hamburgensis X14]
 gb|ABE64265.1| Sel1 [Nitrobacter hamburgensis X14]
          Length = 357

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 67/80 (83%)

Query: 10  TVPLXLLRKAARQNSAIAQNRLAHVLATGAGAPVDKVEALKWHTVAKTAGKGDPDLDDIL 69
           T  + LLRKAARQNSAIAQNRLAHVL TG GAPVDKVE LKWH VAKTAGKGD  LD+ +
Sbjct: 276 TAAVSLLRKAARQNSAIAQNRLAHVLVTGMGAPVDKVEGLKWHIVAKTAGKGDLMLDEAM 335

Query: 70  ADMSPEDRAKGEAAARKWIG 89
           A  +PE+RAK E+AARKW+G
Sbjct: 336 AQATPEERAKAESAARKWLG 355


>ref|YP_001242724.1| putative beta-lactamase [Bradyrhizobium sp. BTAi1]
 gb|ABQ38818.1| putative Beta-lactamase [Bradyrhizobium sp. BTAi1]
          Length = 368

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 64/79 (81%)

Query: 13  LXLLRKAARQNSAIAQNRLAHVLATGAGAPVDKVEALKWHTVAKTAGKGDPDLDDILADM 72
           + LLR+AARQNS IAQNRLA VL  GAGAP+DKVE  KWH VAKTAGKGDP LD+  ADM
Sbjct: 289 VSLLRRAARQNSPIAQNRLAWVLYYGAGAPMDKVEGYKWHLVAKTAGKGDPKLDEKFADM 348

Query: 73  SPEDRAKGEAAARKWIGNN 91
            PEDRAKGE AA++W+G  
Sbjct: 349 PPEDRAKGEQAAKRWLGTT 367


>ref|ZP_01045398.1| sel1-like repeat protein [Nitrobacter sp. Nb-311A]
 gb|EAQ36726.1| sel1-like repeat protein [Nitrobacter sp. Nb-311A]
          Length = 342

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 64/77 (83%)

Query: 13  LXLLRKAARQNSAIAQNRLAHVLATGAGAPVDKVEALKWHTVAKTAGKGDPDLDDILADM 72
           + LLRKAARQNSAIAQNRLA VL TG GAP+DK+E LKWH VAKTAGKGD  LD+ LA  
Sbjct: 264 VSLLRKAARQNSAIAQNRLARVLVTGMGAPMDKIEGLKWHIVAKTAGKGDLMLDEALAQA 323

Query: 73  SPEDRAKGEAAARKWIG 89
           +PE+RA  E+AARKW+G
Sbjct: 324 TPEERANAESAARKWLG 340


>ref|YP_534616.1| Sel1-like protein [Rhodopseudomonas palustris BisB18]
 gb|ABD90297.1| Sel1-like [Rhodopseudomonas palustris BisB18]
          Length = 368

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/78 (67%), Positives = 63/78 (80%)

Query: 13  LXLLRKAARQNSAIAQNRLAHVLATGAGAPVDKVEALKWHTVAKTAGKGDPDLDDILADM 72
           + LLRKAARQN+ IAQNRLA VL TG G P D++E LKWH V+KTAGKGD  LD+ LA +
Sbjct: 290 VALLRKAARQNNPIAQNRLARVLLTGKGPPEDRLEGLKWHVVSKTAGKGDLMLDEALAQL 349

Query: 73  SPEDRAKGEAAARKWIGN 90
           +PEDRAK +AAARKW+G 
Sbjct: 350 TPEDRAKVDAAARKWLGT 367


>ref|YP_319344.1| Sel1 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
 gb|ABA05992.1| sel1-like repeat [Nitrobacter winogradskyi Nb-255]
          Length = 346

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 60/77 (77%)

Query: 13  LXLLRKAARQNSAIAQNRLAHVLATGAGAPVDKVEALKWHTVAKTAGKGDPDLDDILADM 72
           + LLRKAAR+NSAIAQNRLAH L  G G P+DKVE LKWH VAKT GKGD  LD  +A  
Sbjct: 268 VSLLRKAARRNSAIAQNRLAHALVEGMGVPMDKVEGLKWHIVAKTGGKGDLKLDAAMAQA 327

Query: 73  SPEDRAKGEAAARKWIG 89
           +PE+RA  E+AARKW+G
Sbjct: 328 TPEERAGAESAARKWLG 344