BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0082.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203260.1| putative biopolymer transport exbB protein m... 540 e-151 ref|YP_001242731.1| hypothetical protein BBta_6938 [Bradyrhizobi... 538 e-151 ref|YP_571455.1| hypothetical protein RPD_4337 [Rhodopseudomonas... 535 e-150 ref|NP_768151.1| hypothetical protein bll1511 [Bradyrhizobium ja... 531 e-149 ref|YP_779598.1| hypothetical protein RPE_0660 [Rhodopseudomonas... 522 e-146 >ref|YP_001203260.1| putative biopolymer transport exbB protein membrane protein [Bradyrhizobium sp. ORS 278] emb|CAL75023.1| conserved hypothetical protein; putative biopolymer transport exbB protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 329 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 287/328 (87%), Positives = 301/328 (91%), Gaps = 6/328 (1%) Query: 3 PSRSDMEIELSKLSSPRIFLVRMLVFLVLCGLVGVVLYKQIVTAFFANPGLNALIGAVLL 62 P R M +E +KLS+PRIFLVRMLVFLVLC LVGV+LYKQI+ AFFANPGLNALIGAVLL Sbjct: 6 PPRPAMSVEPTKLSTPRIFLVRMLVFLVLCALVGVILYKQIIMAFFANPGLNALIGAVLL 65 Query: 63 IGIILAFRQVIRLYPEVAWVNNFRIADPGLAIERRPTLLAPMAAILGGERSGRMSISQQT 122 IG+ILAFRQ+IRLYPEV+WVNNFRIADPGLA+ R PTLLAPMAAILG ER+GRMSISQQT Sbjct: 66 IGVILAFRQIIRLYPEVSWVNNFRIADPGLAVARHPTLLAPMAAILGRERTGRMSISQQT 125 Query: 123 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGA 182 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGA Sbjct: 126 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGA 185 Query: 183 LFDTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVR 242 LFDTLK GLAAPL GMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVR Sbjct: 186 LFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVR 245 Query: 243 --GISGDEAGVSGNMQGAIDRLRTALEEGGGGRSTTAAMANLAEAIQGLVAHMRTEQQMI 300 G SGD S ++ AI+RLRTA+EE G R TAAMANLAEAIQGLVAHMRTEQQMI Sbjct: 246 EYGGSGD---TSADLSVAIERLRTAMEE-GSNRGATAAMANLAEAIQGLVAHMRTEQQMI 301 Query: 301 REWADGQGEQNREIKRLLERLARQPEKS 328 REWADGQGEQNREIKRLLERLARQPEKS Sbjct: 302 REWADGQGEQNREIKRLLERLARQPEKS 329 >ref|YP_001242731.1| hypothetical protein BBta_6938 [Bradyrhizobium sp. BTAi1] gb|ABQ38825.1| hypothetical protein BBta_6938 [Bradyrhizobium sp. BTAi1] Length = 330 Score = 538 bits (1385), Expect = e-151, Method: Compositional matrix adjust. Identities = 286/326 (87%), Positives = 302/326 (92%), Gaps = 1/326 (0%) Query: 3 PSRSDMEIELSKLSSPRIFLVRMLVFLVLCGLVGVVLYKQIVTAFFANPGLNALIGAVLL 62 PSRS M++ ++KLS+PRIFLVRMLVFLVLC LVGVVLYKQI+ AFFANPGLNALIGAVLL Sbjct: 6 PSRSAMDVAMTKLSTPRIFLVRMLVFLVLCALVGVVLYKQIIMAFFANPGLNALIGAVLL 65 Query: 63 IGIILAFRQVIRLYPEVAWVNNFRIADPGLAIERRPTLLAPMAAILGGERSGRMSISQQT 122 IG++L+FRQVIRLYPEV+WVNNFRIADPGLA+ R PTLLAPMAAILG ERSGRMSISQQT Sbjct: 66 IGVVLSFRQVIRLYPEVSWVNNFRIADPGLAVPRHPTLLAPMAAILGRERSGRMSISQQT 125 Query: 123 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGA 182 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGA Sbjct: 126 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGA 185 Query: 183 LFDTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVR 242 LFDTLK GLAAPL GMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVR Sbjct: 186 LFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVR 245 Query: 243 GISGDEAGVSGNMQGAIDRLRTALEEGGGGRSTTAAMANLAEAIQGLVAHMRTEQQMIRE 302 G G SG++ A++RLRTA+EE G GR TAAMANLAEAIQGLV HMRTEQQMIRE Sbjct: 246 EFGGSGDGASGDLAIAVERLRTAMEE-GSGRGATAAMANLAEAIQGLVGHMRTEQQMIRE 304 Query: 303 WADGQGEQNREIKRLLERLARQPEKS 328 WADGQGEQNREIKRLLERLARQ EKS Sbjct: 305 WADGQGEQNREIKRLLERLARQTEKS 330 >ref|YP_571455.1| hypothetical protein RPD_4337 [Rhodopseudomonas palustris BisB5] gb|ABE41554.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 333 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/328 (84%), Positives = 298/328 (90%), Gaps = 2/328 (0%) Query: 2 PPSRSDMEIELSKLSSPRIFLVRMLVFLVLCGLVGVVLYKQIVTAFFANPGLNALIGAVL 61 P RS MEIELSKLSSPRIFLVRMLVFLVLC L+ VVLYKQ++TAF ANPGLNALIG VL Sbjct: 5 PSPRSAMEIELSKLSSPRIFLVRMLVFLVLCALITVVLYKQVITAFLANPGLNALIGMVL 64 Query: 62 LIGIILAFRQVIRLYPEVAWVNNFRIADPGLAIERRPTLLAPMAAILGGERSGRMSISQQ 121 LIGI+LAFRQVIRLYPEVAWVN+FRI+DPGLA++RRPTLLAPMAAILGGERSGR++IS Q Sbjct: 65 LIGIVLAFRQVIRLYPEVAWVNHFRISDPGLALDRRPTLLAPMAAILGGERSGRIAISPQ 124 Query: 122 TMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAG 181 MRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGS+G+V+ GLKVGGDAG Sbjct: 125 IMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSIGQVVSGLKVGGDAG 184 Query: 182 ALFDTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTV 241 +LFDTLKEGLAAPLGGMGISFSSSLFGLAGSL+LGFLDLQSSQAQNRFYTDLEDWLA V Sbjct: 185 SLFDTLKEGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWLASNV 244 Query: 242 RGISGDEAG--VSGNMQGAIDRLRTALEEGGGGRSTTAAMANLAEAIQGLVAHMRTEQQM 299 RG + + G SG +Q A++RLR LE+GG R+TTAAMANLAEAIQ LVAHMR EQQM Sbjct: 245 RGATAENGGGAGSGELQNALERLRLTLEDGGANRATTAAMANLAEAIQNLVAHMRNEQQM 304 Query: 300 IREWADGQGEQNREIKRLLERLARQPEK 327 IREWAD QGEQNREIK LL RLARQPEK Sbjct: 305 IREWADAQGEQNREIKELLARLARQPEK 332 >ref|NP_768151.1| hypothetical protein bll1511 [Bradyrhizobium japonicum USDA 110] dbj|BAC46776.1| bll1511 [Bradyrhizobium japonicum USDA 110] Length = 343 Score = 531 bits (1367), Expect = e-149, Method: Compositional matrix adjust. Identities = 278/331 (83%), Positives = 295/331 (89%), Gaps = 8/331 (2%) Query: 5 RSDMEIELSKLSSPRIFLVRMLVFLVLCGLVGVVLYKQIVTAFFANPGLNALIGAVLLIG 64 RS M+IE +KLSSP +FLVRMLVFLVLC LVGVVLYKQI+ AFFANPGLNALIGAVL IG Sbjct: 12 RSPMDIEYTKLSSPSVFLVRMLVFLVLCALVGVVLYKQIIQAFFANPGLNALIGAVLFIG 71 Query: 65 IILAFRQVIRLYPEVAWVNNFRIADPGLAIERRPTLLAPMAAILGGERSGRMSISQQTMR 124 I+LAFRQVIRLYPEV+WVNNFRIADPGLA R P LLAPMA ILGGER+GRM+I+Q TMR Sbjct: 72 IVLAFRQVIRLYPEVSWVNNFRIADPGLAPARHPKLLAPMAMILGGERTGRMTITQTTMR 131 Query: 125 HLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGALF 184 HLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGD+GALF Sbjct: 132 HLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDSGALF 191 Query: 185 DTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVRGI 244 DTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLA TVR Sbjct: 192 DTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLATTVREY 251 Query: 245 SGDEAGV--------SGNMQGAIDRLRTALEEGGGGRSTTAAMANLAEAIQGLVAHMRTE 296 E V SG +Q A++RLR+ LEEG R TTAAMA+LAEAIQ LV+HMRTE Sbjct: 252 GRGEVTVAATGGGVASGELQAAVERLRSVLEEGSASRGTTAAMASLAEAIQALVSHMRTE 311 Query: 297 QQMIREWADGQGEQNREIKRLLERLARQPEK 327 QQMIREWADGQGEQNREI+RLLERLARQPEK Sbjct: 312 QQMIREWADGQGEQNREIRRLLERLARQPEK 342 >ref|YP_779598.1| hypothetical protein RPE_0660 [Rhodopseudomonas palustris BisA53] gb|ABJ04618.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 326 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 274/324 (84%), Positives = 296/324 (91%), Gaps = 3/324 (0%) Query: 4 SRSDMEIELSKLSSPRIFLVRMLVFLVLCGLVGVVLYKQIVTAFFANPGLNALIGAVLLI 63 SR+ ++ E +KLSSPRIFLVRMLVFLVLC LV VVLYKQ++TAFFANPGLNALIGAVLLI Sbjct: 5 SRTAIDFEFNKLSSPRIFLVRMLVFLVLCALVAVVLYKQVITAFFANPGLNALIGAVLLI 64 Query: 64 GIILAFRQVIRLYPEVAWVNNFRIADPGLAIERRPTLLAPMAAILGGERSGRMSISQQTM 123 GI+L+FRQVIRL PEVAWVNNFRIADPGLA+ +RP LLAPMAAILGGERSGRM+ISQQTM Sbjct: 65 GILLSFRQVIRLSPEVAWVNNFRIADPGLALAQRPILLAPMAAILGGERSGRMTISQQTM 124 Query: 124 RHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVGGDAGAL 183 RHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVI+GLKVGGDAG+L Sbjct: 125 RHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIEGLKVGGDAGSL 184 Query: 184 FDTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLAGTVRG 243 FDTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLA TV Sbjct: 185 FDTLKEGLAAPLGGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLASTVSE 244 Query: 244 ISGDEAGVSGNMQGAIDRLRTALEEGGGGRSTTAAMANLAEAIQGLVAHMRTEQQMIREW 303 GD G ++Q ++RLR ALE GGGR +T AMANLA+AIQ LVAHMR EQQMIREW Sbjct: 245 FGGDSQG--ADLQPTLERLRQALES-GGGRGSTVAMANLADAIQSLVAHMRHEQQMIREW 301 Query: 304 ADGQGEQNREIKRLLERLARQPEK 327 ADGQGEQNREIK+LLER+ARQ E+ Sbjct: 302 ADGQGEQNREIKQLLERIARQSEE 325