BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0081.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203259.1| hypothetical protein BRADO1110 [Bradyrhizobi... 613 e-173 ref|ZP_08627455.1| flagellar motor rotation protein MotB [Bradyr... 608 e-172 ref|YP_001242732.1| hypothetical protein BBta_6939 [Bradyrhizobi... 607 e-172 ref|NP_768150.1| hypothetical protein bll1510 [Bradyrhizobium ja... 604 e-171 ref|YP_578731.1| hypothetical protein Nham_3542 [Nitrobacter ham... 595 e-168 >ref|YP_001203259.1| hypothetical protein BRADO1110 [Bradyrhizobium sp. ORS 278] emb|CAL75022.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. ORS 278] Length = 342 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 301/342 (88%), Positives = 330/342 (96%) Query: 1 MALARSRRSESGFNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEVTGKDKALEQLTA 60 MALARSRR +SG NYWPGFVDALSTLVLSIVFLL+VFLVVQFFLSQEVTGKDKALEQL A Sbjct: 1 MALARSRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA 60 Query: 61 KIAQLNDLLSLEKLSKLTLDDQVAQLRAGLASAEGERDRMKGLYEGLASSGSDAQGRANE 120 KIAQLN++LSLEKL KL+LDDQVAQLRAGL++AE ERDR+KGLY+GLA++GS+A GRANE Sbjct: 61 KIAQLNEMLSLEKLGKLSLDDQVAQLRAGLSNAEAERDRIKGLYDGLANAGSNATGRANE 120 Query: 121 LNKALESEKAVSSRALAQIELLNQQISALRRQLAALEEALDASEKRDKESQNRIADLGQR 180 LN+ALESEK V++RALAQIE+LNQQISALRRQLAALE+ALDASEKRDKESQNRIADLG R Sbjct: 121 LNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNRIADLGSR 180 Query: 181 LNVALAQRVQELSKYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGK 240 LNVALAQRVQEL++YRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEG+ Sbjct: 181 LNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ 240 Query: 241 TELDTVASALIDLDKQIPPEIAWVLRVDGHTDVRPINSPLFKSNWELSSARAISVVQYLV 300 EL++VA+ALIDLDKQIP EI+WVLRVDGHTDVRPINSP+FKSNWELSSARAISVVQYL+ Sbjct: 241 QELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLI 300 Query: 301 SLGVPAQRLVAAGFAEFQPLDAAQTEEAYKRNRRIELKLTER 342 SLGVPAQRLVAAGFAEFQPLD A T+EA++RNRRIELKLTER Sbjct: 301 SLGVPAQRLVAAGFAEFQPLDTANTDEAFRRNRRIELKLTER 342 >ref|ZP_08627455.1| flagellar motor rotation protein MotB [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10081.1| flagellar motor rotation protein MotB [Bradyrhizobiaceae bacterium SG-6C] Length = 342 Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust. Identities = 302/342 (88%), Positives = 325/342 (95%) Query: 1 MALARSRRSESGFNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEVTGKDKALEQLTA 60 MAL+RSRRS+SGFNYWPGFVDALSTLVL++VFLLSVFLVVQFFLSQEVTGKDKALE+L A Sbjct: 1 MALSRSRRSDSGFNYWPGFVDALSTLVLAVVFLLSVFLVVQFFLSQEVTGKDKALERLNA 60 Query: 61 KIAQLNDLLSLEKLSKLTLDDQVAQLRAGLASAEGERDRMKGLYEGLASSGSDAQGRANE 120 +IAQLNDLLSLEKL KL LD+Q++Q+RAGLASAE ERDR+KGLY+GLA +G+ AQGRA E Sbjct: 61 QIAQLNDLLSLEKLGKLNLDEQLSQMRAGLASAEAERDRVKGLYDGLAGAGASAQGRAVE 120 Query: 121 LNKALESEKAVSSRALAQIELLNQQISALRRQLAALEEALDASEKRDKESQNRIADLGQR 180 L KALESEK VS+RALAQIE+LNQQISALRRQLAALEEALDASEKRDKESQ +IADLGQR Sbjct: 121 LGKALESEKQVSARALAQIEVLNQQISALRRQLAALEEALDASEKRDKESQTKIADLGQR 180 Query: 181 LNVALAQRVQELSKYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGK 240 LNVALAQRVQELS+YRSEFFGRLRAILGNRPD+R+VGDRFVFQSEVFFDTGQA LLPEG+ Sbjct: 181 LNVALAQRVQELSRYRSEFFGRLRAILGNRPDVRIVGDRFVFQSEVFFDTGQAVLLPEGR 240 Query: 241 TELDTVASALIDLDKQIPPEIAWVLRVDGHTDVRPINSPLFKSNWELSSARAISVVQYLV 300 ELD +ASALIDLDKQIP EIAWVLRVDGHTDVRPINSP FKSNWELSSARAISVVQYLV Sbjct: 241 AELDKLASALIDLDKQIPAEIAWVLRVDGHTDVRPINSPQFKSNWELSSARAISVVQYLV 300 Query: 301 SLGVPAQRLVAAGFAEFQPLDAAQTEEAYKRNRRIELKLTER 342 SLGVPAQRLVAAGFAEFQPLD +TEEAYKRNRRIELKLTER Sbjct: 301 SLGVPAQRLVAAGFAEFQPLDPEKTEEAYKRNRRIELKLTER 342 >ref|YP_001242732.1| hypothetical protein BBta_6939 [Bradyrhizobium sp. BTAi1] gb|ABQ38826.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. BTAi1] Length = 342 Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust. Identities = 297/342 (86%), Positives = 328/342 (95%) Query: 1 MALARSRRSESGFNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEVTGKDKALEQLTA 60 MALAR+RR +SG NYWPGFVDALSTLVLSIVFLL+VFLVVQFFLSQEVTGKDKALEQL A Sbjct: 1 MALARTRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA 60 Query: 61 KIAQLNDLLSLEKLSKLTLDDQVAQLRAGLASAEGERDRMKGLYEGLASSGSDAQGRANE 120 KIAQLN++LSLEKL KL+LDDQVAQLRAGLA+AE ERDR+KGLY+GLAS+GS+A GR NE Sbjct: 61 KIAQLNEMLSLEKLGKLSLDDQVAQLRAGLANAEAERDRVKGLYDGLASAGSNAAGRTNE 120 Query: 121 LNKALESEKAVSSRALAQIELLNQQISALRRQLAALEEALDASEKRDKESQNRIADLGQR 180 LN+AL+SEK V++RA+AQIE+LNQQISALRRQLAALE+ALDASEKRDKESQNRIADLG R Sbjct: 121 LNRALDSEKQVTARAMAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNRIADLGSR 180 Query: 181 LNVALAQRVQELSKYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGK 240 LNVALAQRVQEL++YRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEG+ Sbjct: 181 LNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ 240 Query: 241 TELDTVASALIDLDKQIPPEIAWVLRVDGHTDVRPINSPLFKSNWELSSARAISVVQYLV 300 EL++VA+AL+DLDKQIP EI+WVLRVDGHTDVRPINSP+FKSNWELSSARAISVVQYL+ Sbjct: 241 QELNSVATALVDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLI 300 Query: 301 SLGVPAQRLVAAGFAEFQPLDAAQTEEAYKRNRRIELKLTER 342 SLGVPAQRLVAAGFAEFQPLD TE+A++RNRRIELKLTER Sbjct: 301 SLGVPAQRLVAAGFAEFQPLDPGNTEDAFRRNRRIELKLTER 342 >ref|NP_768150.1| hypothetical protein bll1510 [Bradyrhizobium japonicum USDA 110] dbj|BAC46775.1| flagellar motor protein [Bradyrhizobium japonicum USDA 110] Length = 342 Score = 604 bits (1557), Expect = e-171, Method: Compositional matrix adjust. Identities = 299/342 (87%), Positives = 325/342 (95%) Query: 1 MALARSRRSESGFNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEVTGKDKALEQLTA 60 MALAR RRS+ FNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEV+GKDKALEQL A Sbjct: 1 MALARGRRSDGAFNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEVSGKDKALEQLNA 60 Query: 61 KIAQLNDLLSLEKLSKLTLDDQVAQLRAGLASAEGERDRMKGLYEGLASSGSDAQGRANE 120 KIAQLN+LLSLEKL KLTLDDQV+QL+AGLASAE ERDR+KGLY+GLA++G+DAQG++ E Sbjct: 61 KIAQLNELLSLEKLGKLTLDDQVSQLKAGLASAESERDRIKGLYDGLAAAGNDAQGKSTE 120 Query: 121 LNKALESEKAVSSRALAQIELLNQQISALRRQLAALEEALDASEKRDKESQNRIADLGQR 180 L KAL+SEKAVS+RALAQIE+LNQQISALRRQLAALEEALDASEKRDKESQNRIADLG R Sbjct: 121 LGKALDSEKAVSARALAQIEVLNQQISALRRQLAALEEALDASEKRDKESQNRIADLGSR 180 Query: 181 LNVALAQRVQELSKYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGK 240 LNVALAQRVQELS+YRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEG+ Sbjct: 181 LNVALAQRVQELSRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGR 240 Query: 241 TELDTVASALIDLDKQIPPEIAWVLRVDGHTDVRPINSPLFKSNWELSSARAISVVQYLV 300 ELDTVA+ALI+LDK+IP EIAWVLRVDGHTDVRP++ FKSNW+LS+ARAISVVQYL+ Sbjct: 241 AELDTVANALIELDKKIPAEIAWVLRVDGHTDVRPVSGASFKSNWDLSAARAISVVQYLI 300 Query: 301 SLGVPAQRLVAAGFAEFQPLDAAQTEEAYKRNRRIELKLTER 342 SLGVPAQRLVAAGF EFQPLD A TE+AYKRNRRIELKLTER Sbjct: 301 SLGVPAQRLVAAGFGEFQPLDTANTEDAYKRNRRIELKLTER 342 >ref|YP_578731.1| hypothetical protein Nham_3542 [Nitrobacter hamburgensis X14] gb|ABE64271.1| OmpA/MotB [Nitrobacter hamburgensis X14] Length = 343 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 296/342 (86%), Positives = 318/342 (92%) Query: 1 MALARSRRSESGFNYWPGFVDALSTLVLSIVFLLSVFLVVQFFLSQEVTGKDKALEQLTA 60 MALAR RR+ESGFNYWPGFVDALSTLVL+IVFLLSVFLVVQFFLSQEV+GKDKALEQL Sbjct: 2 MALARGRRNESGFNYWPGFVDALSTLVLAIVFLLSVFLVVQFFLSQEVSGKDKALEQLNT 61 Query: 61 KIAQLNDLLSLEKLSKLTLDDQVAQLRAGLASAEGERDRMKGLYEGLASSGSDAQGRANE 120 KIAQL DLLSLEKL KL+L D+V+QLRAGLASAE ERDR+KGLY+GLA +G++A GR + Sbjct: 62 KIAQLTDLLSLEKLGKLSLGDEVSQLRAGLASAEAERDRVKGLYDGLAGAGNNAAGRNTQ 121 Query: 121 LNKALESEKAVSSRALAQIELLNQQISALRRQLAALEEALDASEKRDKESQNRIADLGQR 180 LNKAL+SEK VSSRALAQ+E+L QQISALRRQLAALE+ALDASEK+DKESQNRIADLGQR Sbjct: 122 LNKALDSEKQVSSRALAQVEVLTQQISALRRQLAALEDALDASEKKDKESQNRIADLGQR 181 Query: 181 LNVALAQRVQELSKYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGK 240 LNVALA+RVQELS+YRSEFFGRLR ILGNRPDIRVVGDRFVFQSEVFFDT QATLLPEGK Sbjct: 182 LNVALAKRVQELSRYRSEFFGRLRTILGNRPDIRVVGDRFVFQSEVFFDTAQATLLPEGK 241 Query: 241 TELDTVASALIDLDKQIPPEIAWVLRVDGHTDVRPINSPLFKSNWELSSARAISVVQYLV 300 ELD VA ALIDLDKQIP EIAWVLRVDGHTDVRPI+SP+FKSNWELSSARAISVVQYLV Sbjct: 242 AELDKVAGALIDLDKQIPHEIAWVLRVDGHTDVRPISSPVFKSNWELSSARAISVVQYLV 301 Query: 301 SLGVPAQRLVAAGFAEFQPLDAAQTEEAYKRNRRIELKLTER 342 SLGVP QRLVAAGF EFQPLD TE+AYKRNRRIELKLTER Sbjct: 302 SLGVPPQRLVAAGFGEFQPLDPGTTEDAYKRNRRIELKLTER 343