BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0046.p (272 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08290785.1| integral membrane transport protein [Streptom... 232 4e-59 ref|YP_884896.1| shikimate transporter [Mycobacterium smegmatis ... 221 1e-55 ref|NP_947687.1| putative transmembrane transport protein [Rhodo... 218 8e-55 ref|YP_001991574.1| major facilitator superfamily protein [Rhodo... 217 2e-54 ref|ZP_01467415.1| major facilitator superfamily (MFS_1) transpo... 206 4e-51 >ref|ZP_08290785.1| integral membrane transport protein [Streptomyces griseoaurantiacus M045] gb|EGG43137.1| integral membrane transport protein [Streptomyces griseoaurantiacus M045] Length = 453 Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 131/271 (48%), Positives = 173/271 (63%), Gaps = 5/271 (1%) Query: 3 MLPREDLMSWGWRLPFLASFLLIVVGIFVRMRITETPVYTEAVVARGKVESNPAMEALRR 62 ++P + +WGWR+PFL SF+++ VG +R RI ETP + +A R + ALR+ Sbjct: 173 LMPDDQFRAWGWRIPFLLSFVVVAVGYLIRRRIVETPAFEKAQEPRTPQRLD-LFAALRQ 231 Query: 63 HPRNFFVVLGARMAENGLGYFFPVFGLSYVITTLGVPKAEALSALMLAFTVELFAILGFA 122 P++F VV+GAR AENG Y FPVFG+++V T LGV AL A++ A +E+ I +A Sbjct: 232 EPKSFLVVIGARFAENGFAYLFPVFGVAFVTTELGVSGNVALGAVVAAAALEMITIPVYA 291 Query: 123 ALSDRIGRRPVYMFGALAGVALAFPFFWMVGTREWIMIALAFILARAVVTAAMFGPQAAY 182 LSDRIGRRPVY+ GA+A V PFF +VGT + LAFI+ V AM PQAAY Sbjct: 292 RLSDRIGRRPVYLAGAIASVVWVVPFFLLVGTGSTWAVMLAFIVGLGVAYPAMLAPQAAY 351 Query: 183 FAELFPPQRRFAGFAFARELGSLLSGGPAPFVATALVAAYGTWWPVACYAMFLSACTVIA 242 FAELF + R +GFAFARE+GS+L+GG APFVATAL A G WWPVA Y ++A T+ A Sbjct: 352 FAELFGTRTRLSGFAFAREIGSVLAGGLAPFVATALFAWAGHWWPVAAYMALMTAITLAA 411 Query: 243 IWIGPETYQENIAADASEQA----ELSTAIP 269 + +GPET +I S + E A+P Sbjct: 412 LAVGPETVNRDIETPVSGETPADEEHQGAVP 442 >ref|YP_884896.1| shikimate transporter [Mycobacterium smegmatis str. MC2 155] gb|ABK74832.1| shikimate transporter [Mycobacterium smegmatis str. MC2 155] Length = 457 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 119/268 (44%), Positives = 172/268 (64%), Gaps = 4/268 (1%) Query: 2 TMLPREDLMSWGWRLPFLASFLLIVVGIFVRMRITETPVYTEAVVAR--GKVESN--PAM 57 T+LP + +WGWR+PFL +L+VVG F+R I ET Y +AV A G E P + Sbjct: 181 TLLPDDAFHTWGWRVPFLLGAVLLVVGYFIRRSIDETQAYEDAVAAEAEGTAEQTKIPVL 240 Query: 58 EALRRHPRNFFVVLGARMAENGLGYFFPVFGLSYVITTLGVPKAEALSALMLAFTVELFA 117 +A+RR PR+F VV+G+R+AENG Y FPVF + + + +LGV + L A+++A V++ A Sbjct: 241 DAIRRSPRSFLVVVGSRLAENGFAYLFPVFAVGFAVNSLGVSSSTTLLAVVIASAVQIGA 300 Query: 118 ILGFAALSDRIGRRPVYMFGALAGVALAFPFFWMVGTREWIMIALAFILARAVVTAAMFG 177 I +A +SDRIGRRPVY GAL V PFF ++ + ++ L F++ ++ AM Sbjct: 301 IPVWANVSDRIGRRPVYAAGALISVLWLVPFFLLLESLSPALLVLGFVVGLGILYPAMLA 360 Query: 178 PQAAYFAELFPPQRRFAGFAFARELGSLLSGGPAPFVATALVAAYGTWWPVACYAMFLSA 237 PQAAY+AELF + R +GFAFARE+GS+L+GG P +ATAL+AA+G WW + Y L+ Sbjct: 361 PQAAYYAELFDTRTRLSGFAFAREIGSVLAGGFLPLIATALIAAFGHWWVIVVYLAVLTL 420 Query: 238 CTVIAIWIGPETYQENIAADASEQAELS 265 T++A+ GPET + +I + A S Sbjct: 421 LTLVALAYGPETNRRDIVSPNETDATAS 448 >ref|NP_947687.1| putative transmembrane transport protein [Rhodopseudomonas palustris CGA009] emb|CAE27783.1| putative transmembrane transport protein [Rhodopseudomonas palustris CGA009] Length = 435 Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 114/255 (44%), Positives = 161/255 (63%), Gaps = 1/255 (0%) Query: 1 VTMLPREDLMSWGWRLPFLASFLLIVVGIFVRMRITETPVYTEAVVARGKVESNPAMEAL 60 + +P + + WGWR+PFL + ++VG F+R + E PVY E V + K E ++ Sbjct: 182 IASMPEDQFLQWGWRIPFLFGGVCVLVGYFIRRGVEEPPVY-ERAVEQAKTEKIGLFTSI 240 Query: 61 RRHPRNFFVVLGARMAENGLGYFFPVFGLSYVITTLGVPKAEALSALMLAFTVELFAILG 120 +R+PR+F +VL RM ENG Y +PVF +SYVITTLG P++ AL A+++A V++ I Sbjct: 241 KRNPRSFVIVLLTRMGENGFAYLYPVFCVSYVITTLGQPRSTALWAVIIASMVQVATIPF 300 Query: 121 FAALSDRIGRRPVYMFGALAGVALAFPFFWMVGTREWIMIALAFILARAVVTAAMFGPQA 180 F LSDR+GR+ VY+ GAL +A PFF ++ T I L F + + AM PQA Sbjct: 301 FGVLSDRLGRKTVYIAGALLSMAWLVPFFLLLDTGATAAIILGFGIGLGIAYPAMLAPQA 360 Query: 181 AYFAELFPPQRRFAGFAFARELGSLLSGGPAPFVATALVAAYGTWWPVACYAMFLSACTV 240 +++AELF Q R +GFAF+RELGSLL+GG APF+ATALVA WWP+ Y L T+ Sbjct: 361 SWYAELFDTQFRLSGFAFSRELGSLLAGGVAPFIATALVAWAHHWWPIVAYMWVLGIITL 420 Query: 241 IAIWIGPETYQENIA 255 I + +GPET + + Sbjct: 421 IGLKLGPETVSKKLG 435 >ref|YP_001991574.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACF01099.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 435 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 114/255 (44%), Positives = 160/255 (62%), Gaps = 1/255 (0%) Query: 1 VTMLPREDLMSWGWRLPFLASFLLIVVGIFVRMRITETPVYTEAVVARGKVESNPAMEAL 60 + +P + + WGWR+PFL + ++VG F+R + E PVY E V + K E ++ Sbjct: 182 IASMPEDQFLQWGWRIPFLFGGVCVLVGYFIRRGVEEPPVY-ERAVEQAKTEKIGLFTSI 240 Query: 61 RRHPRNFFVVLGARMAENGLGYFFPVFGLSYVITTLGVPKAEALSALMLAFTVELFAILG 120 +R+PR+F +VL RM ENG Y +PVF +SYVITTLG P++ AL A+++A V++ I Sbjct: 241 KRNPRSFVIVLLTRMGENGFAYLYPVFCVSYVITTLGQPRSTALWAVIIASMVQVATIPF 300 Query: 121 FAALSDRIGRRPVYMFGALAGVALAFPFFWMVGTREWIMIALAFILARAVVTAAMFGPQA 180 F LSDRIGR+ VY+ G L +A PFF ++ T I L F + + AM PQA Sbjct: 301 FGVLSDRIGRKTVYIAGTLLSMAWLVPFFLLLDTGATAAIILGFGIGLGIAYPAMLAPQA 360 Query: 181 AYFAELFPPQRRFAGFAFARELGSLLSGGPAPFVATALVAAYGTWWPVACYAMFLSACTV 240 +++AELF Q R +GFAF+RELGSLL+GG APF+ATALVA WWP+ Y L T+ Sbjct: 361 SWYAELFDTQFRLSGFAFSRELGSLLAGGVAPFIATALVAWAHHWWPIVAYMWALGIITL 420 Query: 241 IAIWIGPETYQENIA 255 I + +GPET + + Sbjct: 421 IGLKLGPETVSKKLG 435 >ref|ZP_01467415.1| major facilitator superfamily (MFS_1) transporter [Stigmatella aurantiaca DW4/3-1] gb|EAU61818.1| major facilitator superfamily (MFS_1) transporter [Stigmatella aurantiaca DW4/3-1] Length = 360 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 169/259 (65%), Gaps = 3/259 (1%) Query: 2 TMLPREDLMSWGWRLPFLASFLLIVVGIFVRMRITETPVYTEAVVARGKVESNPAMEALR 61 + LP + +SWGWR+PFL S +LI +G+F+R+ ++E+PV+ + P ++ALR Sbjct: 90 SRLPEAEFLSWGWRVPFLLSAVLIGIGVFIRLSVSESPVFRNRK-KDAEAPKLPVLDALR 148 Query: 62 RHPRNFFVVLGARMAENGLGYFFPVFGLSYVITTLGVPKAEALSALMLAFTVELFAILGF 121 +PR + +GAR AENG Y F L+Y LG+P++ L+ +++A ++ L AI F Sbjct: 149 TYPRQILLAMGARFAENGFFYIITTFVLTYGTERLGLPRSTLLNGVLVATSIHLVAIPAF 208 Query: 122 AALSDRIGRRPVYMFGALAGVALAFPFFWMVGTREWIMIALAFILARAVVTAAMFGPQAA 181 A SDR+GRRPVY+ GAL LAFPFFW++ T+E +I +A L V AAM+GPQA+ Sbjct: 209 GAASDRLGRRPVYLAGALGCGLLAFPFFWLLDTKETGLIWMAITLG-IVAHAAMYGPQAS 267 Query: 182 YFAELFPPQRRFAGFAFARELGSLLSGGPAPFVATALVAAY-GTWWPVACYAMFLSACTV 240 +F+ELF + R++G + +L S+ +GG +P +ATAL+A + G WP++ Y + L+ T+ Sbjct: 268 FFSELFGTRVRYSGASLGYQLASVFAGGLSPIIATALLARFQGQSWPISIYMVGLALITL 327 Query: 241 IAIWIGPETYQENIAADAS 259 +++++ ET++E + + S Sbjct: 328 VSVYLSAETFREQLTEEDS 346