BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0044.p (503 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773442.1| hypothetical protein blr6802 [Bradyrhizobium ja... 543 e-152 ref|YP_826266.1| hypothetical protein Acid_5025 [Candidatus Soli... 517 e-144 ref|YP_004184773.1| hypothetical protein AciPR4_4030 [Terriglobu... 515 e-144 ref|YP_824383.1| hypothetical protein Acid_3120 [Candidatus Soli... 461 e-127 ref|YP_001166059.1| hypothetical protein Saro_3674 [Novosphingob... 396 e-108 >ref|NP_773442.1| hypothetical protein blr6802 [Bradyrhizobium japonicum USDA 110] dbj|BAC52067.1| blr6802 [Bradyrhizobium japonicum USDA 110] Length = 559 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 292/518 (56%), Positives = 340/518 (65%), Gaps = 17/518 (3%) Query: 2 RVHCVLARRRL--------ARVVVLAI-AAFVSTKATAAELTLDVATMPRVGLIGPRFQS 52 R V RRR+ ARV LA+ AA S A A +++ A + +G I PRFQS Sbjct: 43 RRQDVHTRRRMPRGGLLDAARVTGLALLAAGTSCAAHAGTVSIAPAGLRAIGTIDPRFQS 102 Query: 53 YNIEMVEVTGGRFWKPYATAAARRRAETERFAARAPIDLHDGRLRKLAAALSPAYLRVSG 112 YNIEMVEVTGGRFWKPY A R A+ +R++ R PIDL + RLR LA ALSPAYLRVSG Sbjct: 103 YNIEMVEVTGGRFWKPYPQAM-RAWADKDRYSYRPPIDLGNTRLRGLAVALSPAYLRVSG 161 Query: 113 TWANSTFFANAETPPTAPQTGFKGTLTRQQWRDVIDFSHAVDAPIVTSFAISTGTRDAEG 172 TWAN+TFFA+ E+ P AP GF L R QWR V+DF+ A A IVTS A+S G+RDA+G Sbjct: 162 TWANATFFADTESAPAAPPPGFNAVLGRAQWRGVVDFARATGAEIVTSLAVSPGSRDADG 221 Query: 173 RWTSEQARQLLAFTKSTGGQIAATEFMNEPDLPAIGGAPDRYDAAAYGRDFATFRAFVKD 232 W +QA++L+ +T+S GG IAA EFMNEP L A GAP YDA AY RD F ++ Sbjct: 222 LWRPDQAQRLIDYTRSLGGHIAAAEFMNEPTLAATNGAPPGYDAKAYVRDVGIFHEWMLR 281 Query: 233 TAPDVTILGPGMIG-------TGTDAHARFAVSAAGVDIVSYHHYGALSARCGGDRTANQ 285 AP I+GPG +G +G A S AGVD SYHHY +S RCGG Sbjct: 282 AAPQTLIVGPGSVGDSASTGASGLRTRDLLAASGAGVDRFSYHHYNTISPRCGGRDEPAG 341 Query: 286 ALSDQWLARTGKTLAFYQALRDRLAPGKPIWLTETAETACGGNRWAATFTDTFRYLDQLG 345 ALS+ WLART L+ Y++LRD AP KPIWLTETA+ ACGGNRW TF DTFRYLDQLG Sbjct: 342 ALSEAWLARTDAALSTYKSLRDEFAPDKPIWLTETADAACGGNRWDKTFLDTFRYLDQLG 401 Query: 346 RLAKAGVQVVMHNTLAASDYGLLDEKTHLPRPNYWAALLWRRLLGTTVLDAGVGEHPGFH 405 RLA+AGVQVVMHNTLAASDYGLLDEKT PRPNYW ALLWRRL+GTTVLDAG PG H Sbjct: 402 RLARAGVQVVMHNTLAASDYGLLDEKTFRPRPNYWGALLWRRLMGTTVLDAGAAMAPGLH 461 Query: 406 VYAHCARDVPGGVALLVINNDRRMRRKLTLSAASQRYTLASATPADGNVQLNGSTLALGA 465 VYAHC G V +L IN R R + L ++RYTL +A VQLNG TLAL Sbjct: 462 VYAHCHPSKRGAVTVLAINISRSTARTIVLPLPAERYTLQAARLQGATVQLNGKTLALTD 521 Query: 466 SDQLPALSGDATAAGVIVFAPATITFLTVANADNANCR 503 D LP L+G A AG + A TITFL + A N+ CR Sbjct: 522 EDGLPPLAGRAIEAGAVQLASETITFLAIPGAANSACR 559 >ref|YP_826266.1| hypothetical protein Acid_5025 [Candidatus Solibacter usitatus Ellin6076] gb|ABJ85981.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length = 537 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/531 (50%), Positives = 337/531 (63%), Gaps = 37/531 (6%) Query: 10 RRLARVVVLAIAAFVSTKATAAELTLDVA--TMPRVGLIGPRFQSYNIEMVEVTGGRFWK 67 ++A +++ +AA V + +A ++PR+G + RFQS+NIEMVEVTGGRFWK Sbjct: 7 EQVAGIILGGLAAVVGAALLGGAVPAPIAPGSLPRIGTVDERFQSFNIEMVEVTGGRFWK 66 Query: 68 PY---------ATAAARRRAET-------ERFAARAPIDLHDGRLRKLAAALSPAYLRVS 111 PY A AR+R + E + RAPIDL + RLRKLAAAL PAYLRVS Sbjct: 67 PYGKQVDAILQAQEKARKRGDKAPAGMDPELYQYRAPIDLANPRLRKLAAALGPAYLRVS 126 Query: 112 GTWANSTFFANAET-PPTAPQTGFKGTLTRQQWRDVIDFSHAVDAPIVTSFAISTGTRDA 170 GTWANST+F ++E+ PP P GF LTR QW+ V+DF+ AV+A ++TSFA STGTRD Sbjct: 127 GTWANSTYFHDSESQPPATPPEGFGSVLTRAQWKGVVDFARAVNAKLITSFATSTGTRDE 186 Query: 171 EGRWTSEQARQLLAFTKSTGGQIAATEFMNEPDLPAIGGAPDRYDAAAYGRDFATFRAFV 230 G WT QARQ L +TKS G IAA EFMNEP+ + G P YDA AY RD A F F Sbjct: 187 TGVWTPRQARQFLDYTKSVKGSIAAAEFMNEPNFAVLAGVPKGYDAKAYARDLAVFLPFA 246 Query: 231 KDTAPDVTILGPGMIGTG--------------TDAHARFAVSAAGVDIVSYHHYGALSAR 276 K APD+ ILGPG +G G + A + D SYH YGA+S R Sbjct: 247 KKEAPDMVILGPGSVGEGGSLVKEGASLPFPMLKSEDLLAATGPVFDAFSYHFYGAVSQR 306 Query: 277 CG----GDRTANQALSDQWLARTGKTLAFYQALRDRLAPGKPIWLTETAETACGGNRWAA 332 C G T ALSD+WLART A+Y+ +RDR GKP+WLTETA+ ACGGN W A Sbjct: 307 CASMGPGGTTPVDALSDEWLARTNSAEAYYRGMRDRFNFGKPMWLTETADAACGGNPWGA 366 Query: 333 TFTDTFRYLDQLGRLAKAGVQVVMHNTLAASDYGLLDEKTHLPRPNYWAALLWRRLLGTT 392 TF D+FRY++QLG LAK VQVV NTL+ASDYGL+DE+T PRPNYW+A+LWRR +G T Sbjct: 367 TFLDSFRYVNQLGSLAKRIVQVVAQNTLSASDYGLVDERTLTPRPNYWSAVLWRRFMGAT 426 Query: 393 VLDAGVGEHPGFHVYAHCARDVPGGVALLVINNDRRMRRKLTLSAASQRYTLASATPADG 452 VL+AG P HVYAHC VPGGVALL IN DR + + + ++ A++RYTL + Sbjct: 427 VLEAGPVSEPAIHVYAHCLAGVPGGVALLAINADRGVYKPIEVAVAAERYTLTATDLLGS 486 Query: 453 NVQLNGSTLALGASDQLPALSGDATAAGVIVFAPATITFLTVANADNANCR 503 V+LNGS L LG +LP + AG ++ APA+ITFL + A+N +CR Sbjct: 487 AVRLNGSELRLGYDGELPRFVPVPSPAGQVMLAPASITFLAIPAANNQSCR 537 >ref|YP_004184773.1| hypothetical protein AciPR4_4030 [Terriglobus saanensis SP1PR4] gb|ADV84779.1| hypothetical protein AciPR4_4030 [Terriglobus saanensis SP1PR4] Length = 511 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 261/511 (51%), Positives = 331/511 (64%), Gaps = 25/511 (4%) Query: 18 LAIAAFVSTKATAAELTLDVATMPRVGLIGPRFQSYNIEMVEVTGGRFWKPYATAAARRR 77 + I ++ AT A + +TMP+VG + PRFQSYN+EMVEV GGRFWKPYA+ AA + Sbjct: 1 MKITLALALSATTAFAQTNPSTMPKVGTVDPRFQSYNVEMVEVIGGRFWKPYASTAAAKP 60 Query: 78 A---------ETERFAARAPIDLHDGRLRKLAAALSPAYLRVSGTWANSTFFANAETP-P 127 + F R P+DL + RLRKLAAALSPAY+RVSG+WAN+ +F +++ P P Sbjct: 61 PTSANQTPGMDPSLFEQRTPLDLSNPRLRKLAAALSPAYIRVSGSWANTVYFQDSDAPAP 120 Query: 128 TAPQTGFKGTLTRQQWRDVIDFSHAVDAPIVTSFAISTGTRDAEGRWTSEQARQLLAFTK 187 P GF G LT QW+ V+DFS AVDA IVTSF+ GTRDA G WT +A + L + Sbjct: 121 ATPPEGFGGVLTCAQWKGVVDFSKAVDAKIVTSFSTGLGTRDASGTWTPAEATKFLRYDD 180 Query: 188 STGGQIAATEFMNEPDLPAIGGAPDRYDAAAYGRDFATFRAFVKDTAPDVTILGPGMIGT 247 S GG IAA EFMNEP G P YDAAAYGRDFA F+ F + +P +LGPG +G Sbjct: 181 SLGGNIAAAEFMNEPTFTTAAGVPKGYDAAAYGRDFAVFQPFFRKASPHALLLGPGSVGE 240 Query: 248 GTD------AHARFAVSAAG---VDIVSYHHYGALSARCGG------DRTANQALSDQWL 292 G D ++ ++A+G VD+ SYH YG++S+RCG T ALS++WL Sbjct: 241 GIDFVPMKLLPSKELLAASGPDPVDVFSYHFYGSVSSRCGNMGSIKSSTTPEAALSEEWL 300 Query: 293 ARTGKTLAFYQALRDRLAPGKPIWLTETAETACGGNRWAATFTDTFRYLDQLGRLAKAGV 352 +RTG FY LRD APGKP+WLTET +TACGG+RWA+TF D+FRYLDQ+G LAK V Sbjct: 301 SRTGIVEEFYAGLRDEYAPGKPMWLTETGQTACGGDRWASTFIDSFRYLDQMGNLAKRHV 360 Query: 353 QVVMHNTLAASDYGLLDEKTHLPRPNYWAALLWRRLLGTTVLDAGVGEHPGFHVYAHCAR 412 QV++HNTLAASDY L+DEKT PRPNYWAALLW +GTT+L+AG P H+YA C + Sbjct: 361 QVILHNTLAASDYALIDEKTLTPRPNYWAALLWHNTMGTTILNAGALPSPKVHLYAACMK 420 Query: 413 DVPGGVALLVINNDRRMRRKLTLSAASQRYTLASATPADGNVQLNGSTLALGASDQLPAL 472 + PGGV LL +N DR + L+L S RYTL SA VQLNG L+L A +P Sbjct: 421 NHPGGVTLLALNLDRTAPQMLSLPQKSTRYTLTSADLLSHTVQLNGKELSLTAEGDVPTP 480 Query: 473 SGDATAAGVIVFAPATITFLTVANADNANCR 503 +G + A G + A+ITF T+ A+N C+ Sbjct: 481 AGVSAAKGSLALPAASITFFTLEAANNPVCK 511 >ref|YP_824383.1| hypothetical protein Acid_3120 [Candidatus Solibacter usitatus Ellin6076] gb|ABJ84098.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length = 516 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 255/515 (49%), Positives = 313/515 (60%), Gaps = 30/515 (5%) Query: 15 VVVLAIAAFVSTKATAAELTLDVATMPRVGLIGPRFQSYNIEMVEVTGGRFWKPYATAAA 74 V++L +AA T+ A + L TMPR G + PRFQSYNIEMVEVTGGRFWKPYA+AA Sbjct: 6 VILLMLAA---TRGGAQPIVLAPRTMPRTGAVDPRFQSYNIEMVEVTGGRFWKPYASAAP 62 Query: 75 RRRAET---------ERFAARAPIDLHDGRLRKLAAALSPAYLRVSGTWANSTFFANAE- 124 + + R PIDL + RLRKLAA L P Y+RVSGTWAN+ +F +++ Sbjct: 63 ASAPKPDAAPAGLPADLLEYRPPIDLANARLRKLAATLGPTYIRVSGTWANTIYFHDSDD 122 Query: 125 TPPTAPQTGFKGTLTRQQWRDVIDFSHAVDAPIVTSFAISTGTRDAEGRWTSEQARQLLA 184 P P GF LTR+QW+ VIDF A + +VTSFA G RD G WT +QAR ++A Sbjct: 123 AAPEKPPAGFNAILTRKQWKGVIDFVQAAEGRLVTSFAFGAGNRDTAGAWTPDQARHVIA 182 Query: 185 FTKSTGGQIAATEFMNEPDLPAIGGAPDRYDAAAYGRDFATFRAFVKDTAPDVTILGPGM 244 +TK+ GG IAA EFMNEP+ A GGA YDAAAYGRD TFR F ++ AP LGPG Sbjct: 183 YTKAAGGSIAAAEFMNEPNYAAQGGAIRGYDAAAYGRDIETFRRFFREAAPGSLFLGPGS 242 Query: 245 IGTG-----------TDAHARFAVSAAGVDIVSYHHYGALSARCGGDR-----TANQALS 288 G G + D+ SYH Y A+S RC G TA A S Sbjct: 243 TGEGGVLGKIPTPGKLQTEDLLKATGPVFDVFSYHIYAAVSQRCSGPMPSIGTTAAAARS 302 Query: 289 DQWLARTGKTLAFYQALRDRLAPGKPIWLTETAETACGGNRWAATFTDTFRYLDQLGRLA 348 +WL+R K AFY LRDR PGKP+W+TE A+ CGGN WA+TF DTFRYL+Q GRLA Sbjct: 303 SEWLSRPDKIHAFYADLRDRYLPGKPLWVTEVADAGCGGNPWASTFLDTFRYLNQHGRLA 362 Query: 349 KAGVQVVMHNTLAASDYGLLDEKTHLPRPNYWAALLWRRLLGTTVLDAGVGEHPGFHVYA 408 + GVQ++ HNTL+ASDYGLLDEKT+ PRPNYW A+LW RL+GTTVL+ ++YA Sbjct: 363 QQGVQMIAHNTLSASDYGLLDEKTYDPRPNYWGAVLWHRLMGTTVLNPVTKAADDLYLYA 422 Query: 409 HCARDVPGGVALLVINNDRRMRRKLTLSAASQRYTLASATPADGNVQLNGSTLALGASDQ 468 HC P GV +L IN R+L ++RYTL++A P VQLNG TL A Sbjct: 423 HCQAGHPSGVTVLAINAG-TTARELDAPMGAERYTLSAAQPDSPTVQLNGRTLEASADGG 481 Query: 469 LPALSGDATAAGVIVFAPATITFLTVANADNANCR 503 LP L+G AG A+ITFL +A N +CR Sbjct: 482 LPPLTGAPVRAGRTSLPAASITFLVFPDAANQSCR 516 >ref|YP_001166059.1| hypothetical protein Saro_3674 [Novosphingobium aromaticivorans DSM 12444] gb|ABP64533.1| hypothetical protein Saro_3674 [Novosphingobium aromaticivorans DSM 12444] Length = 506 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/515 (43%), Positives = 295/515 (57%), Gaps = 32/515 (6%) Query: 12 LARVVVLAIAAFVSTK--ATAAELTLDVATMPRVGLIGPRFQSYNIEMVEVTGGRFWKPY 69 + R +L+ A V+ A A +L + T+ ++G + R+QSYNIEMVEVTGGRFW PY Sbjct: 1 MMRKALLSATALVALTGAAPAPAPSLQLGTLAKLGTVNERYQSYNIEMVEVTGGRFWAPY 60 Query: 70 ATAAARRRAETERFAARAPIDLHDGRLRKLAAALSPAYLRVSGTWANSTFF-ANAETPPT 128 +A ER+ R PIDL D +L LA AL P+ +RVSGTWAN+T+ A E P Sbjct: 61 GGSA------DERYRQRPPIDLTDPKLVALAKALGPSLVRVSGTWANNTYLEAEGENLP- 113 Query: 129 APQTGFKGTLTRQQWRDVIDFSHAVDAPIVTSFAISTGTRDAEGRWTSEQARQLLAFTKS 188 AP GF L R QWR V+ FS AVDA IVTSFA+S GTRDA G WT QA++L+ T+ Sbjct: 114 APPAGFVQVLKRDQWRRVVAFSKAVDARIVTSFAVSNGTRDANGVWTPAQAQRLVDLTRD 173 Query: 189 TGGQIAATEFMNEPDLP-AIGGAPDRYDAAAYGRDFATFRAFVKDTAPDVTILG------ 241 GG++ A EF NE ++P A P Y AA YG +F FR + + PD+ ILG Sbjct: 174 AGGELYAAEFFNEANMPSAAPQMPKGYTAANYGAEFRLFRDWARKAVPDMKILGVGGVGE 233 Query: 242 ---------PGMIGTGTDAHARFAVSAAGVDIVSYHHYGALSARCGG----DRTANQALS 288 P +G+ + + VD VSYH YG++S RC G + AL+ Sbjct: 234 AGLLKDVPVPAEMGSHVSSEDMMQANPNSVDGVSYHFYGSVSQRCAGLGIGTAQKHDALT 293 Query: 289 DQWLARTGKTLAFYQALRDRLAPGKPIWLTETAETACGGNRWAATFTDTFRYLDQLGRLA 348 +WL T + +Y ALRDR PGKP+W TETA+ ACGG+ WA+TF DTFRYL+Q LA Sbjct: 294 AKWLDLTVRDYRYYAALRDRFEPGKPMWNTETAQAACGGSPWASTFLDTFRYLNQNAALA 353 Query: 349 KAGVQVVMHNTLAASDYGLLDEKTHLPRPNYWAALLWRRLLGTTVLDAGVGEHPGFHVYA 408 + G+QVVMHNTLAASDY L+D T PRPNYW A+LW+R +G+TVL + P +YA Sbjct: 354 QQGLQVVMHNTLAASDYALIDRDTLTPRPNYWGAVLWKRTMGSTVLASPRSPSPALRLYA 413 Query: 409 HCARDVPGGVALLVINNDRRMRRKLTLSAASQRYTLASATPADGNVQLNGSTLALGASDQ 468 HC PGGVA++ +N + + L +T+ V +NG AL A + Sbjct: 414 HCLAGKPGGVAVMALNTG-EAAQMIGLGGKGLGWTMTGQPLDTRTVLVNGKAPALSADLK 472 Query: 469 LPALSGDATAAGVIVFAPATITFLTVANADNANCR 503 L L G A AG + +I F + A N CR Sbjct: 473 LTGLDG-APVAGKVTLPGQSIAFYAIPGAANPACR 506