BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0043.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240712.1| hypothetical protein BBta_4781 [Bradyrhizobi... 292 4e-77 ref|YP_001206509.1| putative chromosome partitioning ATPase [Bra... 292 4e-77 ref|NP_771801.1| hypothetical protein bll5161 [Bradyrhizobium ja... 292 6e-77 ref|YP_782324.1| hypothetical protein RPE_3412 [Rhodopseudomonas... 286 3e-75 ref|ZP_08630283.1| ATPase [Bradyrhizobiaceae bacterium SG-6C] >g... 285 7e-75 >ref|YP_001240712.1| hypothetical protein BBta_4781 [Bradyrhizobium sp. BTAi1] gb|ABQ36806.1| hypothetical protein BBta_4781 [Bradyrhizobium sp. BTAi1] Length = 306 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 139/268 (51%), Positives = 192/268 (71%), Gaps = 7/268 (2%) Query: 30 SAGERVCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWAR 87 S V ++G + GSGKST A+H+AVAL+KAGQRVATIDLD++Q+S THY+ NR WAR Sbjct: 9 SGSAHVVVLGNEKGGSGKSTTALHIAVALLKAGQRVATIDLDSRQQSFTHYINNRSAWAR 68 Query: 88 ETSLDLGIPAHMCFETVSGRSSEVETLGRSALAEIVE---RLGRSHDFVVIDCPGHDTYL 144 T L L +P H C + G++ +++ ++ + +E + + DF+V+D PG+D+YL Sbjct: 69 RTGLHLELPTHYCIKL--GQTLQIDENEKAEFQQFMEAVCSVEHAFDFIVVDTPGNDSYL 126 Query: 145 TTFTHSLANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQPAF 204 HS+A+TL+TP+NDSFLDFDVLGTVDP + VTG SHY++MV + RR+R D Sbjct: 127 MRLAHSMADTLVTPINDSFLDFDVLGTVDPATYAVTGESHYAEMVRDVRRKRRQVDGAMT 186 Query: 205 EWVVLRNRLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDVS 264 +W+V+RNRLSMLGSRNK+LV + L EL+ L FR +DG AERV++REF+PRGLTA+DD+ Sbjct: 187 DWIVVRNRLSMLGSRNKQLVADGLKELSLRLGFRAIDGFAERVVYREFFPRGLTALDDID 246 Query: 265 QLALGGRPTMSHVTARLEMERLMTAIML 292 + LG RP + HVTAR E+ L+ + L Sbjct: 247 EATLGTRPNLGHVTAREEVTSLLRQLKL 274 >ref|YP_001206509.1| putative chromosome partitioning ATPase [Bradyrhizobium sp. ORS 278] emb|CAL78289.1| conserved hypothetical protein; putative ATPase involved in chromosome partitioning [Bradyrhizobium sp. ORS 278] Length = 307 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 143/266 (53%), Positives = 186/266 (69%), Gaps = 3/266 (1%) Query: 30 SAGERVCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWAR 87 S V ++G + GSGKST A+H+AVAL+KAGQRVATIDLD +Q+S THY+ NR WAR Sbjct: 10 SGSAHVVVLGNEKGGSGKSTTALHIAVALLKAGQRVATIDLDCRQQSFTHYINNRSAWAR 69 Query: 88 ETSLDLGIPAHMCFET-VSGRSSEVETLGRSALAEIVERLGRSHDFVVIDCPGHDTYLTT 146 T L L +P H C + + + E E E V + RS DF+VID PG+D+YL Sbjct: 70 RTGLRLELPTHYCIQLGQTLQIDENENTEFQQFMEAVSAVERSFDFIVIDTPGNDSYLMR 129 Query: 147 FTHSLANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQPAFEW 206 HS+A+TL+TP+NDSFLDFDVLGTVD + VTG SHY++MV + RR+R D +W Sbjct: 130 LAHSMADTLVTPINDSFLDFDVLGTVDAATYAVTGESHYAEMVRDVRRKRRQVDGAMTDW 189 Query: 207 VVLRNRLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDVSQL 266 +V+RNRLSMLGSRNK+LV E L +L+ L FR +DG AERV++REF+PRGLTA+DD+ + Sbjct: 190 IVVRNRLSMLGSRNKQLVAEGLKDLSLRLGFRAIDGFAERVVYREFFPRGLTALDDIDEA 249 Query: 267 ALGGRPTMSHVTARLEMERLMTAIML 292 LG RP + HVTAR E+ L+ + L Sbjct: 250 TLGTRPNLGHVTAREEVTSLLRQLKL 275 >ref|NP_771801.1| hypothetical protein bll5161 [Bradyrhizobium japonicum USDA 110] dbj|BAC50426.1| bll5161 [Bradyrhizobium japonicum USDA 110] Length = 307 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 143/268 (53%), Positives = 190/268 (70%), Gaps = 7/268 (2%) Query: 30 SAGERVCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWAR 87 S V ++G + GSGKST A+H+AVAL+KAGQRVATIDLD +Q+S THY+ NR WAR Sbjct: 10 SGSAHVVVLGNEKGGSGKSTTALHIAVALLKAGQRVATIDLDCRQQSFTHYINNRAAWAR 69 Query: 88 ETSLDLGIPAHMCF---ETVSGRSSEVETLGRSALAEIVERLGRSHDFVVIDCPGHDTYL 144 T LDL +P H C ET+ + +E E E V + S DF+VID PG D+YL Sbjct: 70 RTKLDLELPVHRCIKLGETM--QIAENENSEFQQFMEAVSAVESSFDFIVIDTPGTDSYL 127 Query: 145 TTFTHSLANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQPAF 204 HS+A+TL+TP+NDSFLDFDVLGTVDP ++ VTG SHY++MV + RR+R D + Sbjct: 128 MRLAHSMADTLVTPINDSFLDFDVLGTVDPANYAVTGESHYAEMVRDTRRKRRQLDGSST 187 Query: 205 EWVVLRNRLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDVS 264 +W+V+RNRLSMLGSRNK+LV + L +L+ L FR +DG AERV++REF+PRGLTA+D++ Sbjct: 188 DWIVVRNRLSMLGSRNKQLVADGLKDLSLRLGFRYIDGFAERVVYREFFPRGLTALDEID 247 Query: 265 QLALGGRPTMSHVTARLEMERLMTAIML 292 + LG RP + H+TAR E+ L+ + L Sbjct: 248 EATLGMRPNLGHLTAREEVTSLLRQLKL 275 >ref|YP_782324.1| hypothetical protein RPE_3412 [Rhodopseudomonas palustris BisA53] gb|ABJ07344.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 307 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 142/268 (52%), Positives = 185/268 (69%), Gaps = 7/268 (2%) Query: 30 SAGERVCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSLTHYVENRRDWAR 87 S V ++G + GSGKST+A+H+ VAL+KAGQRVATIDLD +Q+S T Y+ NRR WAR Sbjct: 10 SGSAHVVVLGNEKGGSGKSTLALHIVVALLKAGQRVATIDLDCRQQSFTRYIRNRRLWAR 69 Query: 88 ETSLDLGIPAHMCFETVSGRSSEVETLGRSALAEIVERLG---RSHDFVVIDCPGHDTYL 144 LDL +P H C G S ++ S L + +G RS DF+VID PGHD+YL Sbjct: 70 RNRLDLELPQHRCIAL--GTSMQIADNEASELEQFAAAVGAVERSVDFIVIDTPGHDSYL 127 Query: 145 TTFTHSLANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMVEEARRERSAHDQPAF 204 HS+A+TL+TP+NDSFLDFDVLGTVDP ++ VTG SHYS MV++ RR+R D Sbjct: 128 MRLAHSMADTLVTPINDSFLDFDVLGTVDPANYAVTGNSHYSAMVQDGRRQRRQVDGVDT 187 Query: 205 EWVVLRNRLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIFREFYPRGLTAIDDVS 264 +W+V+RNRLS+ GSRN +L+ L EL+ + FR VDG AERV++REF+PRGLTA+D + Sbjct: 188 DWIVVRNRLSIQGSRNNQLIAGGLRELSLQIGFRAVDGFAERVVYREFFPRGLTALDTID 247 Query: 265 QLALGGRPTMSHVTARLEMERLMTAIML 292 LG RP+M HVTAR E+ L+ + L Sbjct: 248 ATTLGMRPSMGHVTAREEVTSLLRQLKL 275 >ref|ZP_08630283.1| ATPase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07156.1| ATPase [Bradyrhizobiaceae bacterium SG-6C] Length = 321 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 147/283 (51%), Positives = 189/283 (66%), Gaps = 13/283 (4%) Query: 18 GTPLLTGVELSVSAGERVCLIG--RNGSGKSTIAMHVAVALIKAGQRVATIDLDNKQKSL 75 G +L S V ++G + GSGKST A+HVAVAL+KAGQRVATIDLD++QKS Sbjct: 13 GFTMLLQTSQGQSGSAHVVVLGNEKGGSGKSTTALHVAVALLKAGQRVATIDLDSRQKSF 72 Query: 76 THYVENRRDWARETSLDLGIPAHMCFETVS------GRSSEVETLGRSALAEIVERLGRS 129 T Y+ENRR WA+ L L +P H C S SE E SA VER + Sbjct: 73 TRYIENRRAWAQRNGLSLELPHHCCVALGSSMLIGDNEMSEFEQF--SAAISAVER---T 127 Query: 130 HDFVVIDCPGHDTYLTTFTHSLANTLITPLNDSFLDFDVLGTVDPNDFKVTGISHYSKMV 189 DF+VID PG D YL HS+A+TL+TP+NDSFLDFDVLG+VDP + V G SHY+ MV Sbjct: 128 CDFIVIDTPGTDNYLMRLAHSMADTLVTPINDSFLDFDVLGSVDPATYSVIGESHYATMV 187 Query: 190 EEARRERSAHDQPAFEWVVLRNRLSMLGSRNKRLVGEALSELAKTLNFRMVDGLAERVIF 249 + AR++R D +W+++RNRLSMLGSRNK+L+ E L +L+ L FR +DG AERV++ Sbjct: 188 KVARKQRRDLDGATTDWIIVRNRLSMLGSRNKQLIAEGLDQLSFRLGFRPIDGFAERVVY 247 Query: 250 REFYPRGLTAIDDVSQLALGGRPTMSHVTARLEMERLMTAIML 292 REF+PRGLTA+DD+ + LG RP M+HVTAR E+ L+ + L Sbjct: 248 REFFPRGLTALDDLDEATLGTRPNMAHVTAREEVTSLLRQLKL 290