BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0037.p         (165 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770791.1| hypothetical protein blr4151 [Bradyrhizobium ja...   292   1e-77
ref|YP_486118.1| CreA [Rhodopseudomonas palustris HaA2] >gi|8657...   288   2e-76
ref|NP_948376.1| CreA family protein [Rhodopseudomonas palustris...   286   1e-75
ref|YP_532217.1| CreA [Rhodopseudomonas palustris BisB18] >gi|90...   286   1e-75
ref|YP_001239862.1| hypothetical protein BBta_3882 [Bradyrhizobi...   285   2e-75

>ref|NP_770791.1| hypothetical protein blr4151 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49416.1| blr4151 [Bradyrhizobium japonicum USDA 110]
          Length = 182

 Score =  292 bits (747), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 137/151 (90%), Positives = 144/151 (95%)

Query: 14  AAAADEPDLIFRRSTVFKWVSPNDKLATYGVDDPEVEGVACHFTVPEKGGFKGWLGLAEE 73
           A AADEPDLIFRRSTVFKWVSPNDKLATYG+DDPEVEGVACHFTVPEKGGFKGWLGLAEE
Sbjct: 30  AQAADEPDLIFRRSTVFKWVSPNDKLATYGLDDPEVEGVACHFTVPEKGGFKGWLGLAEE 89

Query: 74  VSDISLACRQIGPIRFKTKLGQGDDMFSKRRSLFFKKMQIVRGCDAKRNVLVYMVYSDRL 133
           VSDISLACRQ+GPI+FK K+ QGDDMF +RRSLFFKKMQIVRGCDAKRNVLVYMVYSD+L
Sbjct: 90  VSDISLACRQVGPIKFKDKMEQGDDMFRRRRSLFFKKMQIVRGCDAKRNVLVYMVYSDKL 149

Query: 134 IEGSPKNSTSSVPIMPWGAADAAVQKCGEFI 164
           IEGSPKNSTS+VPIMPWG ADA VQKCGEF 
Sbjct: 150 IEGSPKNSTSTVPIMPWGPADANVQKCGEFF 180


>ref|YP_486118.1| CreA [Rhodopseudomonas palustris HaA2]
 gb|ABD07207.1| CreA [Rhodopseudomonas palustris HaA2]
          Length = 182

 Score =  288 bits (737), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 132/160 (82%), Positives = 146/160 (91%)

Query: 6   LALGQAGPAAAADEPDLIFRRSTVFKWVSPNDKLATYGVDDPEVEGVACHFTVPEKGGFK 65
           + +    P +AA +PDLIFRRSTVFK +SPNDKLATYG+DDPE++GVACHFTVPE+GGFK
Sbjct: 23  VTISATAPVSAAQDPDLIFRRSTVFKLLSPNDKLATYGIDDPEIQGVACHFTVPERGGFK 82

Query: 66  GWLGLAEEVSDISLACRQIGPIRFKTKLGQGDDMFSKRRSLFFKKMQIVRGCDAKRNVLV 125
           GWLGLA+EVSDISLACRQIGPIRFK KL QGDDMFS+RRS+FFKKMQIVRGCD KRNVLV
Sbjct: 83  GWLGLADEVSDISLACRQIGPIRFKEKLDQGDDMFSRRRSMFFKKMQIVRGCDTKRNVLV 142

Query: 126 YMVYSDRLIEGSPKNSTSSVPIMPWGAADAAVQKCGEFIQ 165
           YMVYSDRLIEGSPKNSTSSVPIMPWGAAD  VQKCG+F +
Sbjct: 143 YMVYSDRLIEGSPKNSTSSVPIMPWGAADPDVQKCGDFFK 182


>ref|NP_948376.1| CreA family protein [Rhodopseudomonas palustris CGA009]
 emb|CAE28478.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 192

 Score =  286 bits (731), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 148/164 (90%), Gaps = 1/164 (0%)

Query: 2   LLMLLALGQAGPAAAADEPDLIFRRSTVFKWVSPNDKLATYGVDDPEVEGVACHFTVPEK 61
           LL L   G +  A AAD+PDLIFRRSTVFK +SPNDKLA YG+DDPE++GVACHFTVPE+
Sbjct: 30  LLALAVTGASTAAVAADDPDLIFRRSTVFKLLSPNDKLAVYGIDDPEIKGVACHFTVPER 89

Query: 62  GGFKGWLGLAEEVSDISLACRQIGPIRFKTKLGQGDDMFSKRRSLFFKKMQIVRGCDAKR 121
           GGFKGWLGLAEEVSDISLACRQ+GPI F  KL QGDDMFS+RRS+FFK+MQIVRGCDAKR
Sbjct: 90  GGFKGWLGLAEEVSDISLACRQVGPIHFTKKLDQGDDMFSQRRSMFFKRMQIVRGCDAKR 149

Query: 122 NVLVYMVYSDRLIEGSPKNSTSSVPIMPWGAADAAVQKCGEFIQ 165
           NVLVYMVYSDRLIEGSPKNSTSSVP+MPWG  DAAV+KCG+FI+
Sbjct: 150 NVLVYMVYSDRLIEGSPKNSTSSVPVMPWG-GDAAVEKCGDFIK 192


>ref|YP_532217.1| CreA [Rhodopseudomonas palustris BisB18]
 gb|ABD87898.1| CreA [Rhodopseudomonas palustris BisB18]
          Length = 180

 Score =  286 bits (731), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 131/152 (86%), Positives = 144/152 (94%)

Query: 14  AAAADEPDLIFRRSTVFKWVSPNDKLATYGVDDPEVEGVACHFTVPEKGGFKGWLGLAEE 73
           A+AA+EPDLIFRRSTVFKW+SPNDKLATY +DDPEVEGVACHFTVPE+GGFKGWLGLAEE
Sbjct: 29  ASAAEEPDLIFRRSTVFKWLSPNDKLATYALDDPEVEGVACHFTVPERGGFKGWLGLAEE 88

Query: 74  VSDISLACRQIGPIRFKTKLGQGDDMFSKRRSLFFKKMQIVRGCDAKRNVLVYMVYSDRL 133
           VSDISLACRQ+GPIRFK K+ QG+DMF K+RSLFFKKMQIVRGCD KRNVLVYMVYSDR+
Sbjct: 89  VSDISLACRQVGPIRFKDKMEQGEDMFQKKRSLFFKKMQIVRGCDIKRNVLVYMVYSDRI 148

Query: 134 IEGSPKNSTSSVPIMPWGAADAAVQKCGEFIQ 165
           IEGSPKNSTSSVP+MPWGA DAAVQKC +F +
Sbjct: 149 IEGSPKNSTSSVPVMPWGAGDAAVQKCADFFK 180


>ref|YP_001239862.1| hypothetical protein BBta_3882 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35956.1| hypothetical protein BBta_3882 [Bradyrhizobium sp. BTAi1]
          Length = 183

 Score =  285 bits (729), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 140/169 (82%), Positives = 149/169 (88%), Gaps = 4/169 (2%)

Query: 1   VLLMLLALGQAGP---AAAADEPDLIFRRSTVFKWVSPNDKLATYGVDDPEVEGVACHFT 57
            L  LL +G + P   A AADEPDLIFRRSTVFK +SPNDKLATYGVDDPEVEGVACHFT
Sbjct: 15  TLAFLLLIGLSSPVVSAYAADEPDLIFRRSTVFKLLSPNDKLATYGVDDPEVEGVACHFT 74

Query: 58  VPEKGGFKGWLGLAEEVSDISLACRQIGPIRFKTKLGQGDDMFSKRRSLFFKKMQIVRGC 117
           VP+KGG+ GWLGLAEEVSDISLACRQIGPIRFK KL Q DDMF +RRSLFFKKMQIVRGC
Sbjct: 75  VPQKGGYAGWLGLAEEVSDISLACRQIGPIRFKRKLEQADDMFRQRRSLFFKKMQIVRGC 134

Query: 118 DAKRNVLVYMVYSDRLIEGSPKNSTSSVPIMPWGAA-DAAVQKCGEFIQ 165
           DAKRNVLVYMVYSD+LIEGSPKNSTSSVP+MPWG A D  VQKCG+FIQ
Sbjct: 135 DAKRNVLVYMVYSDKLIEGSPKNSTSSVPVMPWGKAIDGDVQKCGDFIQ 183