BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0034.p         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_948374.1| hypothetical protein RPA3035 [Rhodopseudomonas ...   155   2e-36
ref|YP_001992420.1| hypothetical protein Rpal_3444 [Rhodopseudom...   153   7e-36
ref|YP_570068.1| hypothetical protein RPD_2940 [Rhodopseudomonas...   150   4e-35
ref|YP_781320.1| hypothetical protein RPE_2401 [Rhodopseudomonas...   149   2e-34
ref|YP_486120.1| hypothetical protein RPB_2504 [Rhodopseudomonas...   147   5e-34

>ref|NP_948374.1| hypothetical protein RPA3035 [Rhodopseudomonas palustris CGA009]
 emb|CAE28476.1| hypothetical protein RPA3035 [Rhodopseudomonas palustris CGA009]
          Length = 138

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 78/97 (80%)

Query: 2   QIRSLYRVPEPRDEFVRQCAPHMLGRWAHPEAVCGCLHDHAAATVDDPDLRQALLRGISE 61
           Q RSL+   + R EF+RQC  HM GRWAHP+AVCGCLHDHAAA V D DLRQALLRGISE
Sbjct: 40  QTRSLFGALDARMEFIRQCTAHMTGRWAHPDAVCGCLHDHAAAKVSDSDLRQALLRGISE 99

Query: 62  TGVPTIETDWVPPSKQGEIGPTFTKIAKPTLQCMFEP 98
           +GVPTI+ DWVP +KQ +I  TFT IAKP LQCMF+P
Sbjct: 100 SGVPTIDNDWVPQTKQSQISATFTLIAKPALQCMFDP 136


>ref|YP_001992420.1| hypothetical protein Rpal_3444 [Rhodopseudomonas palustris TIE-1]
 gb|ACF01945.1| hypothetical protein Rpal_3444 [Rhodopseudomonas palustris TIE-1]
          Length = 131

 Score =  153 bits (387), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 77/97 (79%)

Query: 2   QIRSLYRVPEPRDEFVRQCAPHMLGRWAHPEAVCGCLHDHAAATVDDPDLRQALLRGISE 61
           Q RSL+   + R EF+RQC  HM GRWAHP+AVCGCLHDHAAA V D DLRQALLRGI E
Sbjct: 33  QTRSLFGALDARMEFIRQCTAHMTGRWAHPDAVCGCLHDHAAAKVSDSDLRQALLRGIRE 92

Query: 62  TGVPTIETDWVPPSKQGEIGPTFTKIAKPTLQCMFEP 98
           +GVPTI+ DWVP +KQ +I  TFT IAKP LQCMF+P
Sbjct: 93  SGVPTIDNDWVPQTKQSQISATFTLIAKPALQCMFDP 129


>ref|YP_570068.1| hypothetical protein RPD_2940 [Rhodopseudomonas palustris BisB5]
 gb|ABE40167.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 107

 Score =  150 bits (380), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 78/98 (79%)

Query: 2   QIRSLYRVPEPRDEFVRQCAPHMLGRWAHPEAVCGCLHDHAAATVDDPDLRQALLRGISE 61
           Q RSL  V +PR EF+RQC  HM GRWAHP+AVCGCLHDHAAA V D DLR+ALLRG+ E
Sbjct: 9   QARSLLAVQDPRTEFIRQCTGHMAGRWAHPDAVCGCLHDHAAAVVPDSDLREALLRGMRE 68

Query: 62  TGVPTIETDWVPPSKQGEIGPTFTKIAKPTLQCMFEPV 99
           +GVPTIE++WVP SKQ  I  TFT IAKP LQCMF+P 
Sbjct: 69  SGVPTIESEWVPASKQSLISATFTLIAKPALQCMFDPA 106


>ref|YP_781320.1| hypothetical protein RPE_2401 [Rhodopseudomonas palustris BisA53]
 gb|ABJ06340.1| hypothetical protein RPE_2401 [Rhodopseudomonas palustris BisA53]
          Length = 135

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 79/96 (82%)

Query: 5   SLYRVPEPRDEFVRQCAPHMLGRWAHPEAVCGCLHDHAAATVDDPDLRQALLRGISETGV 64
           +L + P+ R EF+R C  HM GRWAHP+ VCGCLHDHAAA VDD DLR+ALLRGI ETGV
Sbjct: 40  TLTKAPDRRVEFIRACTAHMSGRWAHPQQVCGCLHDHAAAVVDDADLREALLRGIGETGV 99

Query: 65  PTIETDWVPPSKQGEIGPTFTKIAKPTLQCMFEPVS 100
           PTIE DWVPP+KQ +I  TFT+IAKP +QCMF+P++
Sbjct: 100 PTIENDWVPPAKQSQIPATFTRIAKPAMQCMFDPLT 135


>ref|YP_486120.1| hypothetical protein RPB_2504 [Rhodopseudomonas palustris HaA2]
 gb|ABD07209.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 130

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 77/97 (79%)

Query: 2   QIRSLYRVPEPRDEFVRQCAPHMLGRWAHPEAVCGCLHDHAAATVDDPDLRQALLRGISE 61
           Q RSL    +PR +F+RQC  HM GRW HP AVCGCLHDHAAA V D DLR+ALLRG+ E
Sbjct: 32  QARSLLNAQDPRVDFIRQCTAHMAGRWTHPAAVCGCLHDHAAAAVPDSDLREALLRGMRE 91

Query: 62  TGVPTIETDWVPPSKQGEIGPTFTKIAKPTLQCMFEP 98
           +GVPTI+++WVPP+KQ +I  TFT IAKP LQCMF+P
Sbjct: 92  SGVPTIQSEWVPPAKQSQISATFTLIAKPALQCMFDP 128