BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0012.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770812.1| hypothetical protein blr4172 [Bradyrhizobium ja... 318 3e-85 ref|ZP_08629600.1| hypothetical protein CSIRO_2691 [Bradyrhizobi... 290 1e-76 ref|YP_570061.1| hypothetical protein RPD_2933 [Rhodopseudomonas... 289 2e-76 ref|NP_948367.1| hypothetical protein RPA3028 [Rhodopseudomonas ... 280 1e-73 ref|YP_001992413.1| Sel1 domain-containing protein repeat-contai... 279 2e-73 >ref|NP_770812.1| hypothetical protein blr4172 [Bradyrhizobium japonicum USDA 110] dbj|BAC49437.1| blr4172 [Bradyrhizobium japonicum USDA 110] Length = 276 Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 171/230 (74%), Positives = 189/230 (82%), Gaps = 17/230 (7%) Query: 1 VKGVPDIASADIATAIKYCAVAARSSRRAMYELGRAYAANRQTAEAASAWRKAADKGSTS 60 VKGVP++A++D+ATAIK+C AA SSRRAM+ELGRAYAA RQ AEA +AWRKAADKGS++ Sbjct: 47 VKGVPEVAASDVATAIKFCRQAAPSSRRAMFELGRAYAAGRQMAEAIAAWRKAADKGSSA 106 Query: 61 AMVELGVLYGNGTGFARDEAQARKLFEXALGGG-----------------AAADPARARE 103 AMVELGVLYG G+G A+DEAQARKLFE A G A ADPA+AR Sbjct: 107 AMVELGVLYGTGSGVAKDEAQARKLFEKAAQAGNPRGVSNLAALGGAGGAAPADPAQARA 166 Query: 104 LLGKSAETNAEAQYQLGMMLAEGKGGAQDDAAARALFEKAAAQNHPGALERMGAFAQAGR 163 LLGK+AETNAEAQYQLG+ML+EG GGA+DD AARALFEKAAAQNHPGALERMGAFAQ GR Sbjct: 167 LLGKAAETNAEAQYQLGLMLSEGTGGAKDDVAARALFEKAAAQNHPGALERMGAFAQEGR 226 Query: 164 GGPKDSDAAKAYYERAAALGDEDAKKALERARCPYVIKDKRGNPVTNLCF 213 GGPKD DAAKAYYERAAALGDEDAK ALER RCPY IKDK+G VT LCF Sbjct: 227 GGPKDKDAAKAYYERAAALGDEDAKAALERLRCPYAIKDKQGKLVTTLCF 276 >ref|ZP_08629600.1| hypothetical protein CSIRO_2691 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08093.1| hypothetical protein CSIRO_2691 [Bradyrhizobiaceae bacterium SG-6C] Length = 278 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 153/229 (66%), Positives = 179/229 (78%), Gaps = 17/229 (7%) Query: 1 VKGVPDIASADIATAIKYCAVAARSSRRAMYELGRAYAANRQTAEAASAWRKAADKGSTS 60 VKGV +A+ D+ATAI++C A+ S+RRAMY+LGRAYAANRQTA+A AWRKAADKGSTS Sbjct: 51 VKGVATVAAGDVATAIRFCKQAS-STRRAMYQLGRAYAANRQTADAIGAWRKAADKGSTS 109 Query: 61 AMVELGVLYGNGTGFARDEAQARKLFEXALGGG----------------AAADPARAREL 104 AMVELGV Y G G A+DEA A KLFE A GG A AD AR+R L Sbjct: 110 AMVELGVAYTTGAGVAKDEAAAAKLFERAAQGGNPRGVSNLAALTGKGAAPADAARSRAL 169 Query: 105 LGKSAETNAEAQYQLGMMLAEGKGGAQDDAAARALFEKAAAQNHPGALERMGAFAQAGRG 164 L K+AETNAEAQ+QLG+ML +G GG +DD AR LFEKAAAQ+HPGALERMGAFA+AGRG Sbjct: 170 LAKAAETNAEAQFQLGLMLQDGVGGPKDDVGARNLFEKAAAQDHPGALERMGAFAKAGRG 229 Query: 165 GPKDSDAAKAYYERAAALGDEDAKKALERARCPYVIKDKRGNPVTNLCF 213 GP+DS AAK+YYE+AAALG+++AK AL+RA CPYV+KDK G VTNLCF Sbjct: 230 GPQDSSAAKSYYEKAAALGNDEAKAALKRAECPYVLKDKSGKVVTNLCF 278 >ref|YP_570061.1| hypothetical protein RPD_2933 [Rhodopseudomonas palustris BisB5] gb|ABE40160.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] Length = 287 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 151/227 (66%), Positives = 176/227 (77%), Gaps = 14/227 (6%) Query: 1 VKGVPDIASADIATAIKYCAVAARSSRRAMYELGRAYAANRQTAEAASAWRKAADKGSTS 60 V+GV DIA ADI TAI+YC AA SSRRA+Y LGRAYAAN Q+A+A +A+RKAADKGS+S Sbjct: 61 VRGVADIAPADIETAIRYCRTAAGSSRRALYALGRAYAANGQSADAIAAFRKAADKGSSS 120 Query: 61 AMVELGVLYGNGTGFARDEAQARKLFE--------------XALGGGAAADPARARELLG 106 AMVELGV Y G G A+D+ +AR+LFE ALGGG +DP + R LL Sbjct: 121 AMVELGVAYATGAGVAKDDGRARQLFERAADAGNPRGVSNLAALGGGTTSDPGKTRALLA 180 Query: 107 KSAETNAEAQYQLGMMLAEGKGGAQDDAAARALFEKAAAQNHPGALERMGAFAQAGRGGP 166 K AETNAEAQYQLGMMLAEG GG +DD AAR LFEKA+AQ H GALERMGAFAQAGRGGP Sbjct: 181 KGAETNAEAQYQLGMMLAEGVGGPKDDVAARTLFEKASAQGHAGALERMGAFAQAGRGGP 240 Query: 167 KDSDAAKAYYERAAALGDEDAKKALERARCPYVIKDKRGNPVTNLCF 213 +D+ AAK +YE+AAALG+ DA AL+RA CP+VIKDK+G V+NLCF Sbjct: 241 QDTAAAKGFYEKAAALGNSDAAAALKRADCPFVIKDKQGKLVSNLCF 287 >ref|NP_948367.1| hypothetical protein RPA3028 [Rhodopseudomonas palustris CGA009] emb|CAE28469.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 279 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/227 (68%), Positives = 180/227 (79%), Gaps = 14/227 (6%) Query: 1 VKGVPDIASADIATAIKYCAVAARSSRRAMYELGRAYAANRQTAEAASAWRKAADKGSTS 60 VKGV +IA D++TAIKYC VA+ SRRAMY LGRAYAA QTAEA +A+RKAADKGS++ Sbjct: 53 VKGVTEIAPGDVSTAIKYCRVASAGSRRAMYGLGRAYAAGGQTAEALAAYRKAADKGSSA 112 Query: 61 AMVELGVLYGNGTGFARDEAQARKLFE--------------XALGGGAAADPARARELLG 106 AMVELGV Y G G +D+A+AR+L E ALGGGA++DP + R LL Sbjct: 113 AMVELGVAYATGVGLPKDDAKARQLLERAAAAGNPRGISNLAALGGGASSDPVKTRALLA 172 Query: 107 KSAETNAEAQYQLGMMLAEGKGGAQDDAAARALFEKAAAQNHPGALERMGAFAQAGRGGP 166 K AE+NAEAQYQLGMM+A+G GG +DDA ARALFEKAA Q HPGAL +MGAFAQAGRGGP Sbjct: 173 KGAESNAEAQYQLGMMMADGIGGPKDDAGARALFEKAAGQGHPGALMQMGAFAQAGRGGP 232 Query: 167 KDSDAAKAYYERAAALGDEDAKKALERARCPYVIKDKRGNPVTNLCF 213 KDSDAAKAYYE+AAALG+ DAK AL+R+ CPYV+KDKRGN VTNLCF Sbjct: 233 KDSDAAKAYYEKAAALGNADAKAALKRSDCPYVLKDKRGNMVTNLCF 279 >ref|YP_001992413.1| Sel1 domain-containing protein repeat-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF01938.1| Sel1 domain protein repeat-containing protein [Rhodopseudomonas palustris TIE-1] Length = 278 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 155/227 (68%), Positives = 179/227 (78%), Gaps = 14/227 (6%) Query: 1 VKGVPDIASADIATAIKYCAVAARSSRRAMYELGRAYAANRQTAEAASAWRKAADKGSTS 60 VKGV +IA D+ATAIKYC VA+ SRRAMY LGRAYAA QTAEA +A+RKAADKGS++ Sbjct: 52 VKGVTEIAPGDVATAIKYCRVASAGSRRAMYGLGRAYAAGGQTAEALAAYRKAADKGSSA 111 Query: 61 AMVELGVLYGNGTGFARDEAQARKLFE--------------XALGGGAAADPARARELLG 106 AMVELGV Y G G +D+ +AR+L E ALGGGA++DP + R LL Sbjct: 112 AMVELGVAYATGAGLTKDDGKARQLLERAAAAGNPRGISNLAALGGGASSDPVKTRALLA 171 Query: 107 KSAETNAEAQYQLGMMLAEGKGGAQDDAAARALFEKAAAQNHPGALERMGAFAQAGRGGP 166 K AE+NAEAQYQLGMM+A+G GG +DDA ARALFEKAA Q HPGAL +MGAFAQAGRGGP Sbjct: 172 KGAESNAEAQYQLGMMMADGIGGPKDDAGARALFEKAAGQGHPGALMQMGAFAQAGRGGP 231 Query: 167 KDSDAAKAYYERAAALGDEDAKKALERARCPYVIKDKRGNPVTNLCF 213 KDSDAAKAYYE+AAALG+ DAK AL+R+ CPYV+KDKRGN VTNLCF Sbjct: 232 KDSDAAKAYYEKAAALGNADAKAALKRSDCPYVLKDKRGNMVTNLCF 278