BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0011.p         (49 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770815.1| hypothetical protein bsr4175 [Bradyrhizobium ja...    97   8e-19
ref|ZP_07026941.1| conserved hypothetical protein [Afipia sp. 1N...    97   9e-19
ref|YP_001261797.1| hypothetical protein Swit_1294 [Sphingomonas...    88   5e-16
ref|YP_002756498.1| hypothetical protein ACP_3504 [Acidobacteriu...    83   2e-14
ref|YP_004611783.1| hypothetical protein Mesop_3237 [Mesorhizobi...    82   2e-14

>ref|NP_770815.1| hypothetical protein bsr4175 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49440.1| bsr4175 [Bradyrhizobium japonicum USDA 110]
          Length = 51

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 1  MIRKLRSGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHERDVQYFKRH 49
          MIRKL SGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHER+VQYFKRH
Sbjct: 3  MIRKLASGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHEREVQYFKRH 51


>ref|ZP_07026941.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI51784.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 49

 Score = 97.1 bits (240), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 47/49 (95%), Positives = 47/49 (95%)

Query: 1  MIRKLRSGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHERDVQYFKRH 49
          MIRKL SGEYRLYSRKVNPKTGKRRNLGTFKSR AAEKHERDVQYFKRH
Sbjct: 1  MIRKLASGEYRLYSRKVNPKTGKRRNLGTFKSRTAAEKHERDVQYFKRH 49


>ref|YP_001261797.1| hypothetical protein Swit_1294 [Sphingomonas wittichii RW1]
 gb|ABQ67659.1| hypothetical protein Swit_1294 [Sphingomonas wittichii RW1]
          Length = 50

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 46/49 (93%)

Query: 1  MIRKLRSGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHERDVQYFKRH 49
          MIRKL+SGEYRLYSRK + KTGKRRNLGTF SRAAAEKHER+VQYFKRH
Sbjct: 2  MIRKLKSGEYRLYSRKPDGKTGKRRNLGTFASRAAAEKHEREVQYFKRH 50


>ref|YP_002756498.1| hypothetical protein ACP_3504 [Acidobacterium capsulatum ATCC
          51196]
 gb|ACO31770.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
          51196]
          Length = 49

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 45/49 (91%)

Query: 1  MIRKLRSGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHERDVQYFKRH 49
          MIRKL+SG+YR+YSRK NP TGKRRNLGTF +R AA++HER++QYFKRH
Sbjct: 1  MIRKLKSGKYRIYSRKKNPDTGKRRNLGTFDTREAAQQHEREIQYFKRH 49


>ref|YP_004611783.1| hypothetical protein Mesop_3237 [Mesorhizobium opportunistum
          WSM2075]
 gb|AEH87689.1| conserved hypothetical protein [Mesorhizobium opportunistum
          WSM2075]
          Length = 49

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/49 (79%), Positives = 45/49 (91%)

Query: 1  MIRKLRSGEYRLYSRKVNPKTGKRRNLGTFKSRAAAEKHERDVQYFKRH 49
          MIRKL+ G+YRLYSRK + KTGKRRNLGTF++R AAEKHER+VQYFKRH
Sbjct: 1  MIRKLKDGKYRLYSRKKDEKTGKRRNLGTFETREAAEKHEREVQYFKRH 49