BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0007.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_982916.1| hypothetical protein Pnap_2693 [Polaromonas nap... 499 e-139 ref|ZP_00051719.2| hypothetical protein Magn03005967 [Magnetospi... 460 e-127 ref|NP_442678.1| hypothetical protein slr0708 [Synechocystis sp.... 256 3e-66 ref|ZP_08233695.1| periplasmic protein [Streptomyces cf. griseus... 226 4e-57 ref|ZP_05003124.1| hypothetical protein SSCG_00451 [Streptomyces... 68 2e-09 >ref|YP_982916.1| hypothetical protein Pnap_2693 [Polaromonas naphthalenivorans CJ2] gb|ABM37995.1| periplasmic protein, function unknown [Polaromonas naphthalenivorans CJ2] Length = 369 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 237/344 (68%), Positives = 277/344 (80%) Query: 20 TAPAQSLPDYMGPISGKTSSTPADVATKDVLALNTGMFELYGDAARIFQKNILDKHPVIL 79 A A LP + + G D+ ++LALN MF+LYGDA+ +F+ NIL HPVIL Sbjct: 26 VAGAAELPADLKSLVGTPLPAAGDIENANLLALNRAMFDLYGDASDVFRTNILANHPVIL 85 Query: 80 GLFSGAGGRLILYRPGKPPTEAPQVPIVYQLLKSVGHSTMALAEVVGPYVNNPDDKAWRG 139 LFSGAGG LYRPG+PP EAP VP+VYQLLKSVGHSTMALA+VVGPY++NP DK+W Sbjct: 86 ALFSGAGGSFTLYRPGQPPLEAPSVPLVYQLLKSVGHSTMALAQVVGPYLDNPKDKSWVA 145 Query: 140 SMQAYRSRMQSALDGLDATPMQADWRDNNRAILKNNIAFMDECLTAGAIPFATLEAFGKK 199 M A+RSRMQSAL+ ++AT M DWR+NN ILK NIAFMDECL G I + L+AF + Sbjct: 146 PMLAFRSRMQSALESVNATAMPPDWRENNHIILKANIAFMDECLKKGDISYDALKAFSVR 205 Query: 200 QAPLLAKNVAWAAQTQVAHWMTVMADWKSQLGADWDKTYGASNTIYVARQNNVIFSVLAQ 259 QAP LAKNV+WAAQTQVAHWM V+A+WK+ LG+DW+KTYGASNTIYVARQNNVIFSVLAQ Sbjct: 206 QAPFLAKNVSWAAQTQVAHWMKVVAEWKTLLGSDWNKTYGASNTIYVARQNNVIFSVLAQ 265 Query: 260 FFGPDAINSRLMLIETISFTTTPSDMLESLTRIIADRSVGALFFGSYHLMDYELMGGDAR 319 FFGP+AIN RL+LIET+SFTTT +DML SLTRIIADRSVG LFFG+ LMDYELMGGDAR Sbjct: 266 FFGPEAINDRLILIETVSFTTTKADMLGSLTRIIADRSVGQLFFGNGRLMDYELMGGDAR 325 Query: 320 EAIIAETKKRSMTAFLPPLVPFGSKQWPTLITPGPGPATIADLK 363 +AIIAE KR+M FLPP+VPFGS+QWPTL+TPGPGP I DL+ Sbjct: 326 DAIIAEAGKRNMQPFLPPVVPFGSRQWPTLVTPGPGPGAIKDLR 369 >ref|ZP_00051719.2| hypothetical protein Magn03005967 [Magnetospirillum magnetotacticum MS-1] Length = 369 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 221/344 (64%), Positives = 262/344 (76%), Gaps = 1/344 (0%) Query: 20 TAPAQ-SLPDYMGPISGKTSSTPADVATKDVLALNTGMFELYGDAARIFQKNILDKHPVI 78 TA AQ +P YM I G TPA A +DVLALNTGMF+LY DA R+ Q +IL +HPVI Sbjct: 25 TAQAQPEIPAYMDVIVGAKVPTPAQAARQDVLALNTGMFDLYADAGRLVQASILAQHPVI 84 Query: 79 LGLFSGAGGRLILYRPGKPPTEAPQVPIVYQLLKSVGHSTMALAEVVGPYVNNPDDKAWR 138 LGLFSGAGGR +LYRPG+ P EAP VP VYQLLKSVGHS MAL VVGP++ DD +W+ Sbjct: 85 LGLFSGAGGRFLLYRPGQAPLEAPAVPEVYQLLKSVGHSVMALGVVVGPHIGKTDDASWQ 144 Query: 139 GSMQAYRSRMQSALDGLDATPMQADWRDNNRAILKNNIAFMDECLTAGAIPFATLEAFGK 198 ++AYR R+Q+ALD LD T M +WR NNRA++ NIAF+D A + FA ++ F Sbjct: 145 PQVRAYRVRLQAALDSLDKTSMPEEWRANNRALIAENIAFIDRVAAAKVVRFADMQTFAA 204 Query: 199 KQAPLLAKNVAWAAQTQVAHWMTVMADWKSQLGADWDKTYGASNTIYVARQNNVIFSVLA 258 Q L N+ WAA TQV HWM V+A+WK QLG DW K Y ASNTIYVARQNNV++SVLA Sbjct: 205 AQKDRLKLNIRWAADTQVKHWMGVLAEWKQQLGPDWPKVYAASNTIYVARQNNVLYSVLA 264 Query: 259 QFFGPDAINSRLMLIETISFTTTPSDMLESLTRIIADRSVGALFFGSYHLMDYELMGGDA 318 QFF P+ IN+RLMLIET+SFTTTP DML+SLTRIIADR+VG FFGS +LMDYELMGGDA Sbjct: 265 QFFTPEDINARLMLIETVSFTTTPQDMLDSLTRIIADRTVGETFFGSRYLMDYELMGGDA 324 Query: 319 REAIIAETKKRSMTAFLPPLVPFGSKQWPTLITPGPGPATIADL 362 R++I+AET+ R M LPP VPFGS QWPTL+T GPGPA++ADL Sbjct: 325 RDSIVAETEARGMVPHLPPKVPFGSHQWPTLVTTGPGPASLADL 368 >ref|NP_442678.1| hypothetical protein slr0708 [Synechocystis sp. PCC 6803] dbj|BAA10749.1| slr0708 [Synechocystis sp. PCC 6803] dbj|BAK51534.1| hypothetical protein SYNGTS_2786 [Synechocystis sp. PCC 6803] Length = 402 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 141/351 (40%), Positives = 192/351 (54%), Gaps = 34/351 (9%) Query: 45 ATKDVLALNTGMFELYGDAARIFQKNILDKHPVILGLFSGAGGRLILYRPGKP-PTEAPQ 103 A K L L++ M Y + + KHP+ILGLFS GG LY PGK P +AP Sbjct: 47 AIKSSLLLDSQMNVYYAKSLDRYTGEFRAKHPIILGLFSNEGGDFYLYMPGKTTPIQAPP 106 Query: 104 VPIVYQLLKSVGHSTMALAEVVGPYVNNPDD-----KAWRGSMQAYRSRMQSALDGLDAT 158 VP+ YQ++K V HS+MA+ ++ PY D+ W+ + AYR+ + L D Sbjct: 107 VPVQYQVVKGVSHSSMAIYAILQPYFATADNAPAAGDGWKAELTAYRAEQANTLAQADQL 166 Query: 159 PMQADWRDNNRAILKNNIAFMDECLTAGAIPFATLEAFGKKQAPLLAKNVAWAAQTQVAH 218 ++ D + IL NNI+F+DE L AG I + A+ K+ P +A AA QV H Sbjct: 167 GLEPDALTAVKEILTNNISFIDETLAAGVIDHQKINAWIKEVVPHFTTTIATAATYQVDH 226 Query: 219 WMTVMADWKSQLGADWDKTYGASNTIYVARQNNVIFSVLAQFFGPDAINSRLMLIETISF 278 WM VMA+WK +G WD+T+G +NT+YV R NN++F+++AQFFG +AIN RL+L ET F Sbjct: 227 WMEVMAEWKKMIGDQWDQTFGVTNTLYVTRTNNILFTLMAQFFGKEAINDRLLLFETTEF 286 Query: 279 TTTPSDMLESLTRIIADRSVGALFFGSYHLMDYELMGGDAREAIIAETKKR--------- 329 TT P ML LTRI+ DR +G FF Y LMD EL+ AREAI + R Sbjct: 287 TTKPDTMLSLLTRIVKDRELGLAFFDDYFLMDVELLSTGAREAIARQDGARVPMAASQGS 346 Query: 330 -----------------SMTAFLPPLVPFGSKQWP--TLITPGPGPATIAD 361 +T LPPL PF S++WP T+ + G GP T+ + Sbjct: 347 YAVGPAHARIRAYDEANGITPMLPPLAPFHSQEWPWRTVASEGEGPETLQE 397 >ref|ZP_08233695.1| periplasmic protein [Streptomyces cf. griseus XylebKG-1] gb|EGE39609.1| periplasmic protein [Streptomyces griseus XylebKG-1] Length = 338 Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 126/319 (39%), Positives = 181/319 (56%), Gaps = 8/319 (2%) Query: 45 ATKDVLALNTGMFELYGDAARIFQKNILDKHPVILGLFSGAGGRLILYRPGKPPTEAPQV 104 A + VL LNT M +Y DA ++++L + PV+L LF GAGGR++L+R G P EAP V Sbjct: 13 AEQAVLELNTAMSAIYADARPGHREDLLSRVPVVLALFDGAGGRMLLHRHGLPVEEAPPV 72 Query: 105 PIVYQLLKSVGHSTMALAEVVGPYVNNPDDKAWRGSMQAYRSRMQSALDGLDATPMQADW 164 P+VYQ LK++ HST+A+ E+ A + + ++ L L + + Sbjct: 73 PVVYQYLKALAHSTVAVHEIA------LRADAGSAARTGFADILEQGLITLPELSLDPEA 126 Query: 165 RDNNRAILKNNIAFMDECLTAGAIPFATLEAFGKKQAPLLAKNVAWAAQTQVAHWMTVMA 224 A+L A +D T G LE FG+ AP + + AA QVAHWM+++ Sbjct: 127 ARAANAVLVTARASLDTSRTPGHAAAQVLEDFGRSCAPHVVTLMEKAAAVQVAHWMSILD 186 Query: 225 DWKSQLG-ADWDKTYGASNTIYVARQNNVIFSVLAQFFGPDAINSRLMLIETISFTTTPS 283 W LG + W++ + A NT+YV R+ N++F+VLAQ+ G AI RL+L ET FTTTP Sbjct: 187 QWHFLLGPSGWERVHAAVNTLYVTRRKNILFTVLAQYLGEQAIGDRLLLFETPEFTTTPE 246 Query: 284 DMLESLTRIIADRSVGALFFGSYHLMDYELMGGDAREAIIAETKKRSMTAFLPPLVPFGS 343 ML+ +TR++ADR++G FFG MD E++G A AI + ++R+ T LP L P+ S Sbjct: 247 RMLDLMTRVVADRNLGRAFFGHGQAMDVEILGDAAVHAIRTQMRQRARTPVLPTLAPYDS 306 Query: 344 KQWPTLITPGPGPATIADL 362 QWP P G T ADL Sbjct: 307 HQWPWPTDPSNG-TTPADL 324 >ref|ZP_05003124.1| hypothetical protein SSCG_00451 [Streptomyces clavuligerus ATCC 27064] ref|ZP_06776079.1| Hypothetical protein SCLAV_p0900 [Streptomyces clavuligerus ATCC 27064] ref|ZP_08220963.1| periplasmic protein, function unknown [Streptomyces clavuligerus ATCC 27064] gb|EDY47423.1| hypothetical protein SSCG_00451 [Streptomyces clavuligerus ATCC 27064] gb|EFG04387.1| Hypothetical protein SCLAV_p0900 [Streptomyces clavuligerus ATCC 27064] Length = 381 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 34/262 (12%) Query: 72 LDKH--PVILGLFSGAGGRLILYRPGKPPTEAPQVPIVYQLLKSVGHSTMALAEVVGPYV 129 L KH PV++ GGR L G TE P V ++L KS+ H + + V+ PY+ Sbjct: 64 LIKHLSPVVVVQNDAKGGRFTLVHKGTLTTENP-VSETFELAKSISHVPLGIFSVIAPYL 122 Query: 130 N------------NPDD-----------KAWRGSMQAYRSRMQSALDGLDATPMQADWRD 166 + +P D W +Q Y + + +A D + + + AD Sbjct: 123 SSQVPNLPNASRIDPHDLRMVAFKGNSTTGWITPLQGYAASLLTARDHIKSANIPADMAA 182 Query: 167 NNRAILKNNIAFMDECLTAGAIPFATLEAFGKKQAPLLAKNVAWAAQTQVAHWMTVMADW 226 A+L + F+D+ A + + E F P + N+ A+ Q+A VM W Sbjct: 183 GCTALLNAALKFIDDSTLAKSFDMKSFEDFSGSVYPNIRTNMKHASAAQIAGVQDVMKRW 242 Query: 227 KSQLG-ADWDKTYG---ASNTIYVARQNNVIFSVLAQFFGPDAINSRLMLIETISFTTTP 282 ++++G +W Y + T V QN++I + P + + L+ + + P Sbjct: 243 RAKIGETEWKDLYCVVLSQWTTSVLNQNSII---IKPCMNPAKVATHLIDLPAVEPPKDP 299 Query: 283 SDM-LESLTRIIADRSVGALFF 303 + L++L RI+ D + F Sbjct: 300 IFVALDNLARIVQDNIAAEMVF 321