BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0022.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_779239.1| malate dehydrogenase [Rhodopseudomonas palustri... 614 e-174 ref|YP_001989225.1| malate dehydrogenase [Rhodopseudomonas palus... 610 e-172 ref|NP_945545.1| malate dehydrogenase [Rhodopseudomonas palustri... 608 e-172 ref|NP_767096.1| malate dehydrogenase [Bradyrhizobium japonicum ... 603 e-170 ref|YP_575895.1| malate dehydrogenase [Nitrobacter hamburgensis ... 598 e-169 >ref|YP_779239.1| malate dehydrogenase [Rhodopseudomonas palustris BisA53] sp|Q07UX5.1|MDH_RHOP5 RecName: Full=Malate dehydrogenase gb|ABJ04259.1| malate dehydrogenase (NAD) [Rhodopseudomonas palustris BisA53] Length = 322 Score = 614 bits (1583), Expect = e-174, Method: Compositional matrix adjust. Identities = 301/321 (93%), Positives = 312/321 (97%) Query: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAQSSPVDGFDSNL 60 MARDKIALIGSGQIGGTLAHLVGLKELGDVV+FDIAEG+PQGKALDIAQSSPVDGFD+ Sbjct: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVMFDIAEGIPQGKALDIAQSSPVDGFDAKF 60 Query: 61 VGANSYEALDGAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 GANSYEALDGA VCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAP+AFVICIT Sbjct: 61 TGANSYEALDGASVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPNAFVICIT 120 Query: 121 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 NPLDAMVWALQKA GLPH KVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM Sbjct: 121 NPLDAMVWALQKACGLPHNKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 Query: 181 VPLTRYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 VPL +YSTVAGIPLPDLVKMGWTSQAR+DEIVDRTRNGGAEIVNLLKTGSAFYAPA SAI Sbjct: 181 VPLVKYSTVAGIPLPDLVKMGWTSQARLDEIVDRTRNGGAEIVNLLKTGSAFYAPATSAI 240 Query: 241 AMAESYLKDKKRVLPCAAYLNGEYGVKDMYVGVPVVVGAKGVERIVEIELAGKDREAFDK 300 AMAESYL+DKKRV+P AAYLNGEYGVKDMYVGVPVV+GAKGVERIVEIELAGKDREAFDK Sbjct: 241 AMAESYLRDKKRVVPVAAYLNGEYGVKDMYVGVPVVIGAKGVERIVEIELAGKDREAFDK 300 Query: 301 SVGAVQGLVDACKKIAPDLLG 321 SVGAVQGLV+ACKKIAP+LLG Sbjct: 301 SVGAVQGLVEACKKIAPELLG 321 >ref|YP_001989225.1| malate dehydrogenase [Rhodopseudomonas palustris TIE-1] sp|B3Q761.1|MDH_RHOPT RecName: Full=Malate dehydrogenase gb|ACE98749.1| malate dehydrogenase, NAD-dependent [Rhodopseudomonas palustris TIE-1] Length = 322 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 301/322 (93%), Positives = 314/322 (97%) Query: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAQSSPVDGFDSNL 60 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIA+SSPVDGFDS L Sbjct: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAESSPVDGFDSKL 60 Query: 61 VGANSYEALDGAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 GANSYEA++GA+V IVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT Sbjct: 61 TGANSYEAIEGARVVIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 Query: 121 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 NPLDAMVWALQKASGLP KKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM Sbjct: 121 NPLDAMVWALQKASGLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 Query: 181 VPLTRYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 VPL +YSTVAGIPLPDLVKMGWTSQAR+DEIVDRTRNGGAEIVNLLKTGSAFYAPA+SAI Sbjct: 181 VPLVKYSTVAGIPLPDLVKMGWTSQARLDEIVDRTRNGGAEIVNLLKTGSAFYAPASSAI 240 Query: 241 AMAESYLKDKKRVLPCAAYLNGEYGVKDMYVGVPVVVGAKGVERIVEIELAGKDREAFDK 300 AMAESYLKDKKRV+P AA+LNGEYGVKDMYVGVPVV+G KGVERIVEIELAGKD+EAFDK Sbjct: 241 AMAESYLKDKKRVVPVAAHLNGEYGVKDMYVGVPVVIGDKGVERIVEIELAGKDKEAFDK 300 Query: 301 SVGAVQGLVDACKKIAPDLLGK 322 SV AVQGLV+ACKKIAPDLLG+ Sbjct: 301 SVAAVQGLVEACKKIAPDLLGR 322 >ref|NP_945545.1| malate dehydrogenase [Rhodopseudomonas palustris CGA009] sp|P80458.2|MDH_RHOPA RecName: Full=Malate dehydrogenase emb|CAE25636.1| malate dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 322 Score = 608 bits (1569), Expect = e-172, Method: Compositional matrix adjust. Identities = 300/322 (93%), Positives = 314/322 (97%) Query: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAQSSPVDGFDSNL 60 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIA+SSPVDGFDS L Sbjct: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAESSPVDGFDSKL 60 Query: 61 VGANSYEALDGAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 GANSYEA++GA+V IVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT Sbjct: 61 TGANSYEAIEGARVVIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 Query: 121 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 NPLDAMVWALQKASGLP KKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM Sbjct: 121 NPLDAMVWALQKASGLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 Query: 181 VPLTRYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 VPL +YSTVAGIPLPDLVKMGWTSQAR+DEIVDRTRNGGAEIVNLLKTGSAFYAPA+SAI Sbjct: 181 VPLVKYSTVAGIPLPDLVKMGWTSQARLDEIVDRTRNGGAEIVNLLKTGSAFYAPASSAI 240 Query: 241 AMAESYLKDKKRVLPCAAYLNGEYGVKDMYVGVPVVVGAKGVERIVEIELAGKDREAFDK 300 AMAESYLKDKKRV+P AA+LNGEYGVKDMYVGVPVV+G KGVERIVEIELAGKD+EAFD+ Sbjct: 241 AMAESYLKDKKRVVPVAAHLNGEYGVKDMYVGVPVVIGDKGVERIVEIELAGKDKEAFDR 300 Query: 301 SVGAVQGLVDACKKIAPDLLGK 322 SV AVQGLV+ACKKIAPDLLG+ Sbjct: 301 SVAAVQGLVEACKKIAPDLLGR 322 >ref|NP_767096.1| malate dehydrogenase [Bradyrhizobium japonicum USDA 110] sp|Q89X59.1|MDH_BRAJA RecName: Full=Malate dehydrogenase dbj|BAC45721.1| malate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust. Identities = 306/322 (95%), Positives = 317/322 (98%) Query: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAQSSPVDGFDSNL 60 MARDKIALIGSGQIGGTLAHL+GLKELGDVV+FDIAEGVPQGKALDIAQSSPVDGFD++ Sbjct: 1 MARDKIALIGSGQIGGTLAHLIGLKELGDVVMFDIAEGVPQGKALDIAQSSPVDGFDAHY 60 Query: 61 VGANSYEALDGAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 GANSYEALD AKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT Sbjct: 61 TGANSYEALDNAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 Query: 121 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM Sbjct: 121 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 Query: 181 VPLTRYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 VPL +YSTVAGIPLPDLVKMGWTSQAR+DEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI Sbjct: 181 VPLVKYSTVAGIPLPDLVKMGWTSQARLDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 Query: 241 AMAESYLKDKKRVLPCAAYLNGEYGVKDMYVGVPVVVGAKGVERIVEIELAGKDREAFDK 300 AMAESYL+DKKRVLP AAYLNGEYGVKDMYVGVPVV+G+KGVER+VEIELAGKDREAFDK Sbjct: 241 AMAESYLRDKKRVLPSAAYLNGEYGVKDMYVGVPVVIGSKGVERVVEIELAGKDREAFDK 300 Query: 301 SVGAVQGLVDACKKIAPDLLGK 322 SVGAVQGLVDACKKIAPDLLG+ Sbjct: 301 SVGAVQGLVDACKKIAPDLLGR 322 >ref|YP_575895.1| malate dehydrogenase [Nitrobacter hamburgensis X14] sp|Q1QQR2.1|MDH_NITHX RecName: Full=Malate dehydrogenase gb|ABE61435.1| malate dehydrogenase (NAD) [Nitrobacter hamburgensis X14] Length = 322 Score = 598 bits (1541), Expect = e-169, Method: Compositional matrix adjust. Identities = 300/322 (93%), Positives = 318/322 (98%) Query: 1 MARDKIALIGSGQIGGTLAHLVGLKELGDVVLFDIAEGVPQGKALDIAQSSPVDGFDSNL 60 MARDKIALIGSGQIGGTLAHL+GLKELGDVV+FDIAEG+PQGK+LDIAQSSPVDGFD+ L Sbjct: 1 MARDKIALIGSGQIGGTLAHLIGLKELGDVVMFDIAEGIPQGKSLDIAQSSPVDGFDAKL 60 Query: 61 VGANSYEALDGAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 GANSYEAL+GA+VCIVTAG+PRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT Sbjct: 61 TGANSYEALEGARVCIVTAGIPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT 120 Query: 121 NPLDAMVWALQKASGLPHKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM 180 NPLDAMVWALQKASG+P KKVVGMAGVLDS+RFRYFLADEF+VSVEDVTAFVLGGHGD+M Sbjct: 121 NPLDAMVWALQKASGMPAKKVVGMAGVLDSSRFRYFLADEFDVSVEDVTAFVLGGHGDSM 180 Query: 181 VPLTRYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 VPL +YSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI Sbjct: 181 VPLVKYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAFYAPAASAI 240 Query: 241 AMAESYLKDKKRVLPCAAYLNGEYGVKDMYVGVPVVVGAKGVERIVEIELAGKDREAFDK 300 AMAESYL+DKKRVLPCAAYLNGE+GVKDMYVGVPVV+GA+GVERIVEIELAGKDREAFDK Sbjct: 241 AMAESYLRDKKRVLPCAAYLNGEFGVKDMYVGVPVVIGARGVERIVEIELAGKDREAFDK 300 Query: 301 SVGAVQGLVDACKKIAPDLLGK 322 SVGAVQGL+DACKKIAPDLLGK Sbjct: 301 SVGAVQGLIDACKKIAPDLLGK 322