BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0014.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767105.1| hypothetical protein bll0465 [Bradyrhizobium ja... 425 e-117 ref|YP_567665.1| hypothetical protein RPD_0526 [Rhodopseudomonas... 406 e-111 ref|YP_483912.1| hypothetical protein RPB_0290 [Rhodopseudomonas... 399 e-109 ref|YP_575758.1| hypothetical protein Nham_0407 [Nitrobacter ham... 394 e-108 ref|YP_316943.1| hypothetical protein Nwi_0324 [Nitrobacter wino... 383 e-104 >ref|NP_767105.1| hypothetical protein bll0465 [Bradyrhizobium japonicum USDA 110] dbj|BAC45730.1| bll0465 [Bradyrhizobium japonicum USDA 110] Length = 258 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/255 (79%), Positives = 227/255 (89%), Gaps = 5/255 (1%) Query: 1 MMAYNCISRWSSA-----LGICAIVAIIRPAHADPRAVVELFTSQGCSSCPPADKIIGDL 55 M A + ISRWS A LGICAIVA+IRPA ADPRAVVELFTSQGCSSCPPADKIIGDL Sbjct: 4 MTASHLISRWSGAFWSGALGICAIVAVIRPAEADPRAVVELFTSQGCSSCPPADKIIGDL 63 Query: 56 AKDPNVIALSMPIDYWDYLGWKDTLADSRFSARQKAYSHVRGDRDVYTPQAVINGSAHVI 115 + DP++IALSMPIDYWDYLGWKDTLADSRFSARQ+AYS +RGDR+VYTPQ V+NGS HV+ Sbjct: 64 SSDPSIIALSMPIDYWDYLGWKDTLADSRFSARQRAYSRMRGDREVYTPQVVVNGSTHVV 123 Query: 116 GSDRASIEDAIKSTERSGSVMSVPVTMTLTGKQINVSVAASKSPAVSRGEVWICSISKSV 175 GSDRA IE AI T++ VMSVPVTM+L+GKQINVSVAASK PA+S GEVWICSI+KSV Sbjct: 124 GSDRAGIESAIGKTDKGMGVMSVPVTMSLSGKQINVSVAASKEPAISHGEVWICSIAKSV 183 Query: 176 PISIARGENRGREITYHNVVRNLLKVGDWNGSSGSWTVPLENITRDGVDAAAVYVQDGNR 235 PI+IA+GENRG++ITYHNVVRNLLKVGDWNG SWTVP+EN+TRDGVD A VYVQDG+R Sbjct: 184 PIAIAKGENRGQQITYHNVVRNLLKVGDWNGRPESWTVPIENLTRDGVDGAVVYVQDGSR 243 Query: 236 EKPGPMLGAAFTSLH 250 EKPGPMLGAA+TSLH Sbjct: 244 EKPGPMLGAAYTSLH 258 >ref|YP_567665.1| hypothetical protein RPD_0526 [Rhodopseudomonas palustris BisB5] gb|ABE37764.1| protein of unknown function DUF1223 [Rhodopseudomonas palustris BisB5] Length = 278 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 189/251 (75%), Positives = 224/251 (89%), Gaps = 1/251 (0%) Query: 1 MMAYNCISRWSSALGICAIVAIIRPAHADPRAVVELFTSQGCSSCPPADKIIGDLAKDPN 60 M+ ISRW ALG+CA++A++RPA A+PRAVVELFTSQGCSSCPPAD+IIGDL+KDP+ Sbjct: 28 MIGVVGISRWLGALGLCALIAMVRPAAAEPRAVVELFTSQGCSSCPPADQIIGDLSKDPS 87 Query: 61 VIALSMPIDYWDYLGWKDTLADSRFSARQKAYSHVRGDRDVYTPQAVINGSAHVIGSDRA 120 VIALS+PIDYWDYLGWKDTLADSRFSARQ+AYS +RGDRDVYTPQ V+NGSAHV+GS+RA Sbjct: 88 VIALSLPIDYWDYLGWKDTLADSRFSARQRAYSQMRGDRDVYTPQVVVNGSAHVVGSNRA 147 Query: 121 SIEDAIKSTERSGSVMSVPVTMTLTGKQINVSVAAS-KSPAVSRGEVWICSISKSVPISI 179 I+DAIKST+++ VM+VPVTM + K+I VSVAA+ RGEVWICS+SK+VPI+I Sbjct: 148 GIDDAIKSTDKATGVMTVPVTMAVNDKEIKVSVAAAPPGDGERRGEVWICSVSKAVPIAI 207 Query: 180 ARGENRGREITYHNVVRNLLKVGDWNGSSGSWTVPLENITRDGVDAAAVYVQDGNREKPG 239 RGENRGRE+TYHNVVR LLKVGDW G++GSW+VPLENI RDG+DAAAVYVQDG+R++PG Sbjct: 208 TRGENRGREVTYHNVVRTLLKVGDWTGAAGSWSVPLENIARDGIDAAAVYVQDGSRDRPG 267 Query: 240 PMLGAAFTSLH 250 PMLGAAFTSLH Sbjct: 268 PMLGAAFTSLH 278 >ref|YP_483912.1| hypothetical protein RPB_0290 [Rhodopseudomonas palustris HaA2] gb|ABD05001.1| Protein of unknown function DUF1223 [Rhodopseudomonas palustris HaA2] Length = 277 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 183/251 (72%), Positives = 221/251 (88%), Gaps = 1/251 (0%) Query: 1 MMAYNCISRWSSALGICAIVAIIRPAHADPRAVVELFTSQGCSSCPPADKIIGDLAKDPN 60 M+ + SRWS ALG+CA++A++RP+ ADPRAVVELFTSQGCSSCPPAD+IIG+LA+DP+ Sbjct: 27 MIGVDGFSRWSGALGLCALIAMVRPSAADPRAVVELFTSQGCSSCPPADRIIGELARDPS 86 Query: 61 VIALSMPIDYWDYLGWKDTLADSRFSARQKAYSHVRGDRDVYTPQAVINGSAHVIGSDRA 120 +IALSMPIDYWDYLGWKDTLADSRFSARQKAYS +RGDRDVYTPQ ++NG H++GS+R Sbjct: 87 IIALSMPIDYWDYLGWKDTLADSRFSARQKAYSQMRGDRDVYTPQVIVNGQTHLVGSNRV 146 Query: 121 SIEDAIKSTERSGSVMSVPVTMTLTGKQINVSVAAS-KSPAVSRGEVWICSISKSVPISI 179 I+ AIKST++ M+VPV M + GK+I VSVAA+ V++GEVWICS+SK+VPI+I Sbjct: 147 GIDGAIKSTDQIPGTMTVPVRMAVNGKEIKVSVAAAPPGERVAQGEVWICSVSKAVPIAI 206 Query: 180 ARGENRGREITYHNVVRNLLKVGDWNGSSGSWTVPLENITRDGVDAAAVYVQDGNREKPG 239 ARGENRGRE+ YHNVVRNLLKVGDWNG++GSW+VPLENI DG+DAAAVYVQDGNR++PG Sbjct: 207 ARGENRGREVVYHNVVRNLLKVGDWNGAAGSWSVPLENIAHDGIDAAAVYVQDGNRDRPG 266 Query: 240 PMLGAAFTSLH 250 MLGAAFTSLH Sbjct: 267 AMLGAAFTSLH 277 >ref|YP_575758.1| hypothetical protein Nham_0407 [Nitrobacter hamburgensis X14] gb|ABE61298.1| protein of unknown function DUF1223 [Nitrobacter hamburgensis X14] Length = 265 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 181/251 (72%), Positives = 221/251 (88%), Gaps = 1/251 (0%) Query: 1 MMAYNCISRWSSALGICAIVAIIRPAHADPRAVVELFTSQGCSSCPPADKIIGDLAKDPN 60 MM + C+SR S ALG+C VAIIRPA A PRAVVELFTSQGCSSCP ADKI+GDL++DP+ Sbjct: 15 MMTHGCLSRLSGALGVCVFVAIIRPAEAGPRAVVELFTSQGCSSCPAADKILGDLSRDPS 74 Query: 61 VIALSMPIDYWDYLGWKDTLADSRFSARQKAYSHVRGDRDVYTPQAVINGSAHVIGSDRA 120 ++ALSMPIDYWDYLGWKDTLAD+RF+ARQKAYS +RGDRDVYTPQ ++NGSAHVIGSDRA Sbjct: 75 IVALSMPIDYWDYLGWKDTLADNRFTARQKAYSQMRGDRDVYTPQVIVNGSAHVIGSDRA 134 Query: 121 SIEDAIKSTERSGSVMSVPVTMTLTGKQINVSVA-ASKSPAVSRGEVWICSISKSVPISI 179 +I++A++ T+++ VMSVPV+M ++G+Q+NVSVA AS + GEVWIC+ISK+VPI+I Sbjct: 135 AIDNAVRDTKKNDDVMSVPVSMAVSGRQLNVSVASASANHPSDHGEVWICAISKAVPIAI 194 Query: 180 ARGENRGREITYHNVVRNLLKVGDWNGSSGSWTVPLENITRDGVDAAAVYVQDGNREKPG 239 RGEN GRE+TYHNVVR+ LKVGDW G +G+W VP+ENI +DGVDAA VYVQDGNR++PG Sbjct: 195 GRGENGGREVTYHNVVRSWLKVGDWTGKAGTWAVPMENIAQDGVDAAVVYVQDGNRDRPG 254 Query: 240 PMLGAAFTSLH 250 PMLGAA+TSLH Sbjct: 255 PMLGAAYTSLH 265 >ref|YP_316943.1| hypothetical protein Nwi_0324 [Nitrobacter winogradskyi Nb-255] gb|ABA03591.1| Protein of unknown function DUF1223 [Nitrobacter winogradskyi Nb-255] Length = 278 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 173/251 (68%), Positives = 219/251 (87%), Gaps = 1/251 (0%) Query: 1 MMAYNCISRWSSALGICAIVAIIRPAHADPRAVVELFTSQGCSSCPPADKIIGDLAKDPN 60 MM+ ++R S ALG+CA+VA+ R A A+PRAVVELFTSQGCSSCP AD+I+GDL+KDP+ Sbjct: 28 MMSRGGLTRLSGALGVCALVALSRAALAEPRAVVELFTSQGCSSCPAADEILGDLSKDPS 87 Query: 61 VIALSMPIDYWDYLGWKDTLADSRFSARQKAYSHVRGDRDVYTPQAVINGSAHVIGSDRA 120 ++ALSMPIDYWDYLGWKDTLAD+RF+ARQKAYS +RGDRDVYTPQ ++NGSAHVIGSDR Sbjct: 88 IVALSMPIDYWDYLGWKDTLADNRFTARQKAYSQMRGDRDVYTPQVIVNGSAHVIGSDRG 147 Query: 121 SIEDAIKSTERSGSVMSVPVTMTLTGKQINVSVAASKSPAVS-RGEVWICSISKSVPISI 179 +IE A++ T++S VMSVPV+M+++G+Q+NVSVA++ +S RGE+W+C++S++VPI+I Sbjct: 148 AIERAVRDTQQSQDVMSVPVSMSVSGRQLNVSVASANGKHLSGRGEIWVCAVSRAVPIAI 207 Query: 180 ARGENRGREITYHNVVRNLLKVGDWNGSSGSWTVPLENITRDGVDAAAVYVQDGNREKPG 239 RGEN GRE+TYHNVVRN LKVGDW G +G+W VP+ENI +GVDAA VYVQDGNRE+PG Sbjct: 208 GRGENSGREVTYHNVVRNWLKVGDWTGKAGTWAVPIENIAHNGVDAAVVYVQDGNRERPG 267 Query: 240 PMLGAAFTSLH 250 MLGAA+T LH Sbjct: 268 RMLGAAYTLLH 278