BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0016.0012.p         (162 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767107.1| cytochrome c biogenesis protein CcmA [Bradyrhiz...   164   5e-39
ref|YP_779250.1| cytochrome c biogenesis protein CcmA [Rhodopseu...   157   4e-37
ref|ZP_08627764.1| ABC transporter ATPase component CcmA [Bradyr...   152   1e-35
ref|YP_483914.1| cytochrome c biogenesis protein CcmA [Rhodopseu...   148   3e-34
ref|YP_004106809.1| heme exporter protein CcmA [Rhodopseudomonas...   148   3e-34

>ref|NP_767107.1| cytochrome c biogenesis protein CcmA [Bradyrhizobium japonicum USDA
           110]
 sp|P30963.1|CCMA_BRAJA RecName: Full=Cytochrome c biogenesis ATP-binding export protein
           CcmA; AltName: Full=Heme exporter protein A
 gb|AAA26192.1| putative [Bradyrhizobium japonicum]
 dbj|BAC45732.1| heme exporter protein A [Bradyrhizobium japonicum USDA 110]
          Length = 200

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 92/104 (88%)

Query: 6   MRLSGRNLKCVRGGREVFSGLDLSATAGEALAITGRNGAGKTSLLRVLAGLLVPAEGVVA 65
           M+LSGR + CVRGGREVF+GLD  A +GEA+A+ GRNG+GKTSLLR++AGLL+PA G +A
Sbjct: 1   MQLSGRRVICVRGGREVFAGLDFEAVSGEAVAVVGRNGSGKTSLLRLIAGLLIPAGGTIA 60

Query: 66  LEGGDAELSLPEQAHYLGHRDALKPALSVAENLSFWREFLXRDR 109
           L+GGDAEL+LPEQ HYLGHRDALKPALSVAENLSFW +FL  +R
Sbjct: 61  LDGGDAELTLPEQCHYLGHRDALKPALSVAENLSFWADFLGGER 104


>ref|YP_779250.1| cytochrome c biogenesis protein CcmA [Rhodopseudomonas palustris
           BisA53]
 gb|ABJ04270.1| heme exporter protein CcmA [Rhodopseudomonas palustris BisA53]
          Length = 200

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 89/104 (85%)

Query: 6   MRLSGRNLKCVRGGREVFSGLDLSATAGEALAITGRNGAGKTSLLRVLAGLLVPAEGVVA 65
           MRL GR +KCVRGGREVF+GLD+ A+AGEA+A+ G NGAGKTSLLR++AGLL PA G +A
Sbjct: 1   MRLVGRGIKCVRGGREVFAGLDVDASAGEAVAVVGPNGAGKTSLLRLIAGLLRPAGGSIA 60

Query: 66  LEGGDAELSLPEQAHYLGHRDALKPALSVAENLSFWREFLXRDR 109
           LEGGD EL+L EQAHYLGHRDALKPALSV+ENL FW+ FL  D 
Sbjct: 61  LEGGDDELTLAEQAHYLGHRDALKPALSVSENLIFWQRFLGGDE 104


>ref|ZP_08627764.1| ABC transporter ATPase component CcmA [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP09668.1| ABC transporter ATPase component CcmA [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 200

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 87/100 (87%)

Query: 6   MRLSGRNLKCVRGGREVFSGLDLSATAGEALAITGRNGAGKTSLLRVLAGLLVPAEGVVA 65
           MRL+G++L+CVRGGR++F  LD S  AG+ALA+TG NGAGK+SLLR++AGLL  A G V 
Sbjct: 1   MRLAGQSLRCVRGGRDIFDSLDFSVPAGQALAVTGINGAGKSSLLRLVAGLLPTASGTVT 60

Query: 66  LEGGDAELSLPEQAHYLGHRDALKPALSVAENLSFWREFL 105
           LEGG+A+L+LPEQAHYLGHRDALKPAL+V ENL FWREFL
Sbjct: 61  LEGGEADLTLPEQAHYLGHRDALKPALTVLENLDFWREFL 100


>ref|YP_483914.1| cytochrome c biogenesis protein CcmA [Rhodopseudomonas palustris
           HaA2]
 sp|Q2J3F7.1|CCMA_RHOP2 RecName: Full=Cytochrome c biogenesis ATP-binding export protein
           CcmA; AltName: Full=Heme exporter protein A
 gb|ABD05003.1| heme exporter protein CcmA [Rhodopseudomonas palustris HaA2]
          Length = 200

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 83/100 (83%)

Query: 6   MRLSGRNLKCVRGGREVFSGLDLSATAGEALAITGRNGAGKTSLLRVLAGLLVPAEGVVA 65
           MRLSGR L+CVRGGREVF GLD  A  GEALA+ GRNGAGKTSLLR++AGLL+PA G + 
Sbjct: 1   MRLSGRGLRCVRGGREVFDGLDFEAAGGEALALIGRNGAGKTSLLRLIAGLLMPAAGSID 60

Query: 66  LEGGDAELSLPEQAHYLGHRDALKPALSVAENLSFWREFL 105
            +G + +  + EQAHYLGHRDALKP+LSV ENL+FWR+FL
Sbjct: 61  FDGSEPDTPVAEQAHYLGHRDALKPSLSVVENLAFWRDFL 100


>ref|YP_004106809.1| heme exporter protein CcmA [Rhodopseudomonas palustris DX-1]
 gb|ADU42076.1| heme exporter protein CcmA [Rhodopseudomonas palustris DX-1]
          Length = 200

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/104 (68%), Positives = 85/104 (81%)

Query: 6   MRLSGRNLKCVRGGREVFSGLDLSATAGEALAITGRNGAGKTSLLRVLAGLLVPAEGVVA 65
           MRLSGR+L+CVRGGREVF+GL   A+ GEALA+ G NGAGKTSLLR++AGLL P  G + 
Sbjct: 1   MRLSGRDLRCVRGGREVFAGLAFDASGGEALALVGHNGAGKTSLLRLIAGLLTPEAGTIT 60

Query: 66  LEGGDAELSLPEQAHYLGHRDALKPALSVAENLSFWREFLXRDR 109
           L+GG+ +  + E AHYLGHRDALKP+LSVAENL FWR+FL  DR
Sbjct: 61  LDGGEPDTPVAELAHYLGHRDALKPSLSVAENLGFWRDFLGGDR 104