BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0008.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767111.1| thiol:disulfide interchange protein [Bradyrhizo... 315 3e-84 ref|YP_001236570.1| periplasmic thioredoxin (cytochrome c biogen... 309 2e-82 ref|YP_779254.1| periplasmic protein thiol [Rhodopseudomonas pal... 296 1e-78 ref|YP_483987.1| periplasmic protein thiol [Rhodopseudomonas pal... 295 2e-78 ref|ZP_08627768.1| cytochrome c-type biogenesis protein CcmG [Br... 295 3e-78 >ref|NP_767111.1| thiol:disulfide interchange protein [Bradyrhizobium japonicum USDA 110] sp|P30960.2|CYCY_BRAJA RecName: Full=Thiol:disulfide interchange protein CycY; AltName: Full=Cytochrome c biogenesis protein CycY; Flags: Precursor dbj|BAC45736.1| thiol:disulfide interchange protein [Bradyrhizobium japonicum USDA 110] Length = 194 Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 152/194 (78%), Positives = 172/194 (88%) Query: 1 MSDQATNSPPQARRLLVVLPLVIFLGLAGLFLLRLYGGDPSKIPSALIGRPAPQTALPAL 60 MS+Q+T++ PQ R L+VLPL+ F+GLA LF RL GDPS+IPSALIGRPAPQTALP L Sbjct: 1 MSEQSTSANPQRRTFLMVLPLIAFIGLALLFWFRLGSGDPSRIPSALIGRPAPQTALPPL 60 Query: 61 DGLVRDGAPVPGLDPAAFKGKVSVVNVWASWCVPCHDEAPLLTELGKDKRFQIIGINYKD 120 +GL D VPGLDPAAFKGKVS+VNVWASWCVPCHDEAPLLTELGKDKRFQ++GINYKD Sbjct: 61 EGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKD 120 Query: 121 SPENARRFLGRYGNPFGIVGVDGNGRASIEWGVYGVPETFLVGREGTIVYKLVGPVTPDN 180 + +NARRFLGRYGNPFG VGVD NGRASIEWGVYGVPETF+VGREGTIVYKLVGP+TPDN Sbjct: 121 AADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDN 180 Query: 181 VNSVLKAEIEKALR 194 + SVL ++EKAL+ Sbjct: 181 LRSVLLPQMEKALK 194 >ref|YP_001236570.1| periplasmic thioredoxin (cytochrome c biogenesis) [Bradyrhizobium sp. BTAi1] gb|ABQ32664.1| periplasmic thioredoxin (cytochrome c biogenesis) [Bradyrhizobium sp. BTAi1] Length = 198 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 151/197 (76%), Positives = 170/197 (86%), Gaps = 1/197 (0%) Query: 1 MSDQATNSP-PQARRLLVVLPLVIFLGLAGLFLLRLYGGDPSKIPSALIGRPAPQTALPA 59 M++QA P P+ R L++LPLV+FLGLA LF RL GDPS+IPSALIGRPAP T LPA Sbjct: 1 MTEQAATEPAPRRRSFLMLLPLVVFLGLAALFWFRLGNGDPSRIPSALIGRPAPNTPLPA 60 Query: 60 LDGLVRDGAPVPGLDPAAFKGKVSVVNVWASWCVPCHDEAPLLTELGKDKRFQIIGINYK 119 L L +DG PVPGLDPAA KGKVS+VNVWASWCVPCHDEAPLL ELG+DKRFQIIGINYK Sbjct: 61 LPELAKDGTPVPGLDPAALKGKVSIVNVWASWCVPCHDEAPLLVELGRDKRFQIIGINYK 120 Query: 120 DSPENARRFLGRYGNPFGIVGVDGNGRASIEWGVYGVPETFLVGREGTIVYKLVGPVTPD 179 D +NARRFLGRYGNP+ +VGVDGNGRA IEWGVYGVPETF+VGREGTIVYKLVGP+T Sbjct: 121 DGADNARRFLGRYGNPYDVVGVDGNGRAGIEWGVYGVPETFVVGREGTIVYKLVGPITAQ 180 Query: 180 NVNSVLKAEIEKALRAG 196 N+++VLK EIEKAL+AG Sbjct: 181 NLDAVLKPEIEKALKAG 197 >ref|YP_779254.1| periplasmic protein thiol [Rhodopseudomonas palustris BisA53] gb|ABJ04274.1| periplasmic protein thiol--disulphide oxidoreductase DsbE [Rhodopseudomonas palustris BisA53] Length = 198 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/197 (75%), Positives = 171/197 (86%), Gaps = 4/197 (2%) Query: 4 QATNSPP--QARR-LLVVLPLVIFLGLAGLFLLRLYGGDPSKIPSALIGRPAPQTALPAL 60 Q+T SP +ARR LL++LPL F +A LF +RL GGDP+KIPSALIGRPAP T LPAL Sbjct: 3 QSTTSPGAGKARRALLMLLPLFGFAVVAALFWVRL-GGDPTKIPSALIGRPAPATTLPAL 61 Query: 61 DGLVRDGAPVPGLDPAAFKGKVSVVNVWASWCVPCHDEAPLLTELGKDKRFQIIGINYKD 120 GL RDGAPVPGL+PAAFKGKVSVVNV+ASWCVPCHDEA L LG+DKR Q++GINYKD Sbjct: 62 QGLSRDGAPVPGLNPAAFKGKVSVVNVFASWCVPCHDEAALFMTLGQDKRLQMVGINYKD 121 Query: 121 SPENARRFLGRYGNPFGIVGVDGNGRASIEWGVYGVPETFLVGREGTIVYKLVGPVTPDN 180 +P+NARRFLGRYGNPF IVGVDGNGRASIEWGVYGVPETF++GR+G I YKLVGPVTPDN Sbjct: 122 APDNARRFLGRYGNPFDIVGVDGNGRASIEWGVYGVPETFVIGRDGNIAYKLVGPVTPDN 181 Query: 181 VNSVLKAEIEKALRAGK 197 +++VLK E+EKAL+AG Sbjct: 182 IDTVLKPELEKALKAGS 198 >ref|YP_483987.1| periplasmic protein thiol [Rhodopseudomonas palustris HaA2] gb|ABD05076.1| periplasmic protein thiol [Rhodopseudomonas palustris HaA2] Length = 197 Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 146/194 (75%), Positives = 161/194 (82%), Gaps = 1/194 (0%) Query: 1 MSDQATNSP-PQARRLLVVLPLVIFLGLAGLFLLRLYGGDPSKIPSALIGRPAPQTALPA 59 MS T++P P R L+V LPL++F GLA LF +RL D SKIPSALIGR PQT LPA Sbjct: 1 MSTPVTDTPSPTRRSLMVALPLLVFAGLAALFWIRLGDRDISKIPSALIGREVPQTELPA 60 Query: 60 LDGLVRDGAPVPGLDPAAFKGKVSVVNVWASWCVPCHDEAPLLTELGKDKRFQIIGINYK 119 LD L RDGA VPGL PA FKGKVSVVNVWASWCVPCHDEAPLLT LG DKRFQI+GINYK Sbjct: 61 LDALTRDGAAVPGLGPAQFKGKVSVVNVWASWCVPCHDEAPLLTALGDDKRFQIVGINYK 120 Query: 120 DSPENARRFLGRYGNPFGIVGVDGNGRASIEWGVYGVPETFLVGREGTIVYKLVGPVTPD 179 D P+NARRFLGRYGNPF VGVD +GRA+IEWGVYGVPETF+VGR+G I YKLVGP+TPD Sbjct: 121 DRPDNARRFLGRYGNPFAAVGVDASGRAAIEWGVYGVPETFVVGRDGKIAYKLVGPITPD 180 Query: 180 NVNSVLKAEIEKAL 193 N++ VLK EIEKAL Sbjct: 181 NLDKVLKPEIEKAL 194 >ref|ZP_08627768.1| cytochrome c-type biogenesis protein CcmG [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09672.1| cytochrome c-type biogenesis protein CcmG [Bradyrhizobiaceae bacterium SG-6C] Length = 195 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 139/189 (73%), Positives = 161/189 (85%) Query: 6 TNSPPQARRLLVVLPLVIFLGLAGLFLLRLYGGDPSKIPSALIGRPAPQTALPALDGLVR 65 ++PP+ R LV LPL+ F LAGLF RL GDP++IPSALIGRPAPQT LP L+GL Sbjct: 5 NSAPPKRRSWLVALPLIAFAVLAGLFWFRLGSGDPARIPSALIGRPAPQTLLPPLEGLTA 64 Query: 66 DGAPVPGLDPAAFKGKVSVVNVWASWCVPCHDEAPLLTELGKDKRFQIIGINYKDSPENA 125 +GA VPGLDPAAFKG+VSVVNVWASWCVPCHDEAPLL +L +DKR ++IGINYKDS +NA Sbjct: 65 NGAQVPGLDPAAFKGQVSVVNVWASWCVPCHDEAPLLVKLAQDKRIRVIGINYKDSADNA 124 Query: 126 RRFLGRYGNPFGIVGVDGNGRASIEWGVYGVPETFLVGREGTIVYKLVGPVTPDNVNSVL 185 RRFLGRYGNPF VG D NGRASIEWGVYGVPETF++GR+G I YKL+GP+TP+N++S L Sbjct: 125 RRFLGRYGNPFAAVGTDANGRASIEWGVYGVPETFVIGRDGAIAYKLIGPITPENIDSAL 184 Query: 186 KAEIEKALR 194 KAEIEKALR Sbjct: 185 KAEIEKALR 193