BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0005.p (314 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767113.1| cell division protein [Bradyrhizobium japonicum... 557 e-157 ref|YP_001236568.1| signal recognition particle-docking protein ... 555 e-156 ref|YP_001202580.1| cell division transporter substrate-binding ... 552 e-155 ref|ZP_01044482.1| cell division transporter substrate-binding p... 541 e-152 ref|YP_575753.1| signal recognition particle-docking protein Fts... 540 e-151 >ref|NP_767113.1| cell division protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45738.1| bll0473 [Bradyrhizobium japonicum USDA 110] Length = 315 Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust. Identities = 279/314 (88%), Positives = 298/314 (94%) Query: 1 MNDTTAGTPKQSWWQRLKGGLKRTSSSIGTAVADLVTKRKLDSAMLDDIEDVLLRADLGT 60 MNDTT+ PK SWW+RL GLKRTSSS+GTAVADLVTKRKLD AMLDDIEDVLLRADLGT Sbjct: 1 MNDTTSDPPKLSWWRRLSNGLKRTSSSLGTAVADLVTKRKLDRAMLDDIEDVLLRADLGT 60 Query: 61 DVAVRIAEAVGKGRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDAGKKPFVVLVVGVN 120 VAVRIA+AVG GRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDA +KPFV+LVVGVN Sbjct: 61 SVAVRIADAVGTGRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDAARKPFVILVVGVN 120 Query: 121 GSGKTTTIGKLAAKFSAEGRKVMLAAGDTFRAAAIEQLKVWGERTKSPVISGAQGSDSAS 180 GSGKTTTIGKL+ KF++EGRKVMLAAGDTFRAAAIEQLKVWGERTK+PVI+G QGSDSAS Sbjct: 121 GSGKTTTIGKLSQKFASEGRKVMLAAGDTFRAAAIEQLKVWGERTKTPVIAGTQGSDSAS 180 Query: 181 LAFSALTAAKEQARDVLLIDTAGRLQNKSELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 LAF+ALTAAKEQ DVLLIDTAGRLQNK+ELMNELEKVVRVIRKVD +APHAVLLVLDAT Sbjct: 181 LAFNALTAAKEQKTDVLLIDTAGRLQNKAELMNELEKVVRVIRKVDDTAPHAVLLVLDAT 240 Query: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKHKLPVHFIGVGEGVEDLAP 300 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVAL+EK KLPVHFIGVGEGV+DLAP Sbjct: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALAEKFKLPVHFIGVGEGVDDLAP 300 Query: 301 FAAKDFAKAIAGID 314 F A+DFA+AIAGI+ Sbjct: 301 FTARDFARAIAGIE 314 >ref|YP_001236568.1| signal recognition particle-docking protein FtsY [Bradyrhizobium sp. BTAi1] gb|ABQ32662.1| signal recognition particle-docking protein FtsY [Bradyrhizobium sp. BTAi1] Length = 315 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 277/314 (88%), Positives = 299/314 (95%) Query: 1 MNDTTAGTPKQSWWQRLKGGLKRTSSSIGTAVADLVTKRKLDSAMLDDIEDVLLRADLGT 60 MNDTT+ TPK SWW+RL GLKRTS ++GTAVADLVTKRKLD AMLDDIEDVLLRADLGT Sbjct: 1 MNDTTSETPKLSWWRRLSAGLKRTSGALGTAVADLVTKRKLDRAMLDDIEDVLLRADLGT 60 Query: 61 DVAVRIAEAVGKGRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDAGKKPFVVLVVGVN 120 VA RIAEAVG GRYDKAISADEVK VVATEVEKVL+PVAKPL ++A KPFV+LVVGVN Sbjct: 61 QVAARIAEAVGAGRYDKAISADEVKAVVATEVEKVLSPVAKPLVVEASHKPFVILVVGVN 120 Query: 121 GSGKTTTIGKLAAKFSAEGRKVMLAAGDTFRAAAIEQLKVWGERTKSPVISGAQGSDSAS 180 GSGKTTTIGKLAAKF+++G++VMLAAGDTFRAAAIEQLKVWGERTK+PVI+GAQGSDSAS Sbjct: 121 GSGKTTTIGKLAAKFASDGKQVMLAAGDTFRAAAIEQLKVWGERTKAPVIAGAQGSDSAS 180 Query: 181 LAFSALTAAKEQARDVLLIDTAGRLQNKSELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 LAF+A+TAAKEQARD+LLIDTAGRLQNK+ELMNELEKVVRVIRKVDASAPHAVLLVLDAT Sbjct: 181 LAFTAITAAKEQARDILLIDTAGRLQNKAELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 Query: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKHKLPVHFIGVGEGVEDLAP 300 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEK KLPVHFIGVGEGV+DL P Sbjct: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKFKLPVHFIGVGEGVDDLQP 300 Query: 301 FAAKDFAKAIAGID 314 FAA+DFA+AIAGID Sbjct: 301 FAARDFARAIAGID 314 >ref|YP_001202580.1| cell division transporter substrate-binding protein FtsY [Bradyrhizobium sp. ORS 278] emb|CAL74334.1| Cell division transporter substrate-binding protein FtsY (Signal recognition particle receptor) [Bradyrhizobium sp. ORS 278] Length = 315 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 277/314 (88%), Positives = 297/314 (94%) Query: 1 MNDTTAGTPKQSWWQRLKGGLKRTSSSIGTAVADLVTKRKLDSAMLDDIEDVLLRADLGT 60 MNDTT+ TPK+SWW+RL GLKRTS ++GTAVADLVTKRKLD AMLDDIEDVLLRADLGT Sbjct: 1 MNDTTSETPKRSWWRRLSDGLKRTSGALGTAVADLVTKRKLDRAMLDDIEDVLLRADLGT 60 Query: 61 DVAVRIAEAVGKGRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDAGKKPFVVLVVGVN 120 VA RIAEAVG GRYDKAISADEVK VVATEVEKVL+PVAKPL I+ G KPFV+LVVGVN Sbjct: 61 QVAARIAEAVGAGRYDKAISADEVKAVVATEVEKVLSPVAKPLTIEPGHKPFVILVVGVN 120 Query: 121 GSGKTTTIGKLAAKFSAEGRKVMLAAGDTFRAAAIEQLKVWGERTKSPVISGAQGSDSAS 180 GSGKTTTIGKLA KF++EG+ VMLAAGDTFRAAAIEQLKVWGERTK+PVI+GAQGSDSAS Sbjct: 121 GSGKTTTIGKLAQKFASEGKHVMLAAGDTFRAAAIEQLKVWGERTKAPVIAGAQGSDSAS 180 Query: 181 LAFSALTAAKEQARDVLLIDTAGRLQNKSELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 LAF+A+TAAKEQ RD+LLIDTAGRLQNK+ELMNELEKVVRVIRKVDASAPHAVLLVLDAT Sbjct: 181 LAFNAITAAKEQGRDILLIDTAGRLQNKAELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 Query: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKHKLPVHFIGVGEGVEDLAP 300 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEK KLPVHFIGVGEGV+DL P Sbjct: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKFKLPVHFIGVGEGVDDLQP 300 Query: 301 FAAKDFAKAIAGID 314 FAAKDFA+AIAGI+ Sbjct: 301 FAAKDFARAIAGIE 314 >ref|ZP_01044482.1| cell division transporter substrate-binding protein FtsY [Nitrobacter sp. Nb-311A] gb|EAQ37263.1| cell division transporter substrate-binding protein FtsY [Nitrobacter sp. Nb-311A] Length = 315 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 271/314 (86%), Positives = 293/314 (93%) Query: 1 MNDTTAGTPKQSWWQRLKGGLKRTSSSIGTAVADLVTKRKLDSAMLDDIEDVLLRADLGT 60 MND+T PKQSWW+RL GGLKRTS+S+GTAVADLVTKRKLD AMLDDIEDVLLRADLG Sbjct: 1 MNDSTEDKPKQSWWRRLSGGLKRTSTSLGTAVADLVTKRKLDRAMLDDIEDVLLRADLGA 60 Query: 61 DVAVRIAEAVGKGRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDAGKKPFVVLVVGVN 120 VA RIAEAVG+GRYDKAISADEVK VVATEVEKVLAPVA+PL ID PFV+LVVGVN Sbjct: 61 AVAERIAEAVGEGRYDKAISADEVKAVVATEVEKVLAPVARPLVIDGTFTPFVILVVGVN 120 Query: 121 GSGKTTTIGKLAAKFSAEGRKVMLAAGDTFRAAAIEQLKVWGERTKSPVISGAQGSDSAS 180 GSGKTTTIGKLAAK SAEGRKVM+AAGDTFRAAAIEQLKVWGERT SPVI+G QGSDSAS Sbjct: 121 GSGKTTTIGKLAAKLSAEGRKVMMAAGDTFRAAAIEQLKVWGERTGSPVIAGEQGSDSAS 180 Query: 181 LAFSALTAAKEQARDVLLIDTAGRLQNKSELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 LAF+ALTAA+ + RDVLLIDTAGRLQNK+ELMNELEK+VRVIR+VDA+APH VLLVLDAT Sbjct: 181 LAFNALTAARNEKRDVLLIDTAGRLQNKAELMNELEKMVRVIRRVDAAAPHVVLLVLDAT 240 Query: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKHKLPVHFIGVGEGVEDLAP 300 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVAL+EKHKLPVHFIGVGEGV+DLAP Sbjct: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALAEKHKLPVHFIGVGEGVDDLAP 300 Query: 301 FAAKDFAKAIAGID 314 F A+DFA+A+AGI+ Sbjct: 301 FTARDFARAVAGIE 314 >ref|YP_575753.1| signal recognition particle-docking protein FtsY [Nitrobacter hamburgensis X14] gb|ABE61293.1| signal recognition particle-docking protein FtsY [Nitrobacter hamburgensis X14] Length = 315 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 273/314 (86%), Positives = 294/314 (93%) Query: 1 MNDTTAGTPKQSWWQRLKGGLKRTSSSIGTAVADLVTKRKLDSAMLDDIEDVLLRADLGT 60 M+D+T PKQSWW+RL GGLKRTSSS+GTAVADLVTKRKLD AMLDDIEDVLLRADLGT Sbjct: 1 MSDSTDDKPKQSWWRRLSGGLKRTSSSLGTAVADLVTKRKLDRAMLDDIEDVLLRADLGT 60 Query: 61 DVAVRIAEAVGKGRYDKAISADEVKDVVATEVEKVLAPVAKPLEIDAGKKPFVVLVVGVN 120 VA RIA AVG+GRYDKAISADEVK VVATEVEKVLA VAKPL +D KPFV+LVVGVN Sbjct: 61 AVAERIAAAVGEGRYDKAISADEVKAVVATEVEKVLAAVAKPLVVDETHKPFVILVVGVN 120 Query: 121 GSGKTTTIGKLAAKFSAEGRKVMLAAGDTFRAAAIEQLKVWGERTKSPVISGAQGSDSAS 180 GSGKTTTIGKLAAK SAEGRKVM+AAGDTFRAAAIEQL+VWGERT SPV++GAQGSD+AS Sbjct: 121 GSGKTTTIGKLAAKLSAEGRKVMMAAGDTFRAAAIEQLQVWGERTGSPVVAGAQGSDAAS 180 Query: 181 LAFSALTAAKEQARDVLLIDTAGRLQNKSELMNELEKVVRVIRKVDASAPHAVLLVLDAT 240 LAF+ALTAA++ RDVLLIDTAGRLQNK+ELMNELEKVVRVIR+VDA+APHAVLLVLDAT Sbjct: 181 LAFNALTAARDDRRDVLLIDTAGRLQNKAELMNELEKVVRVIRRVDAAAPHAVLLVLDAT 240 Query: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALSEKHKLPVHFIGVGEGVEDLAP 300 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVAL+EKHKLPVHFIGVGEGV+DLAP Sbjct: 241 VGQNALSQVEAFHRTAGVTGLVMTKLDGTARGGILVALAEKHKLPVHFIGVGEGVDDLAP 300 Query: 301 FAAKDFAKAIAGID 314 F A DFAKAIAGI+ Sbjct: 301 FTAHDFAKAIAGIE 314