BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0010.p         (194 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771606.1| hypothetical protein blr4966 [Bradyrhizobium ja...   358   2e-97
ref|YP_001240530.1| hypothetical protein BBta_4595 [Bradyrhizobi...   327   4e-88
ref|YP_001992084.1| hypothetical protein Rpal_3103 [Rhodopseudom...   318   4e-85
ref|NP_948107.1| CoA-binding [Rhodopseudomonas palustris CGA009]...   317   4e-85
ref|YP_577707.1| CoA-binding [Nitrobacter hamburgensis X14] >gi|...   316   1e-84

>ref|NP_771606.1| hypothetical protein blr4966 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50231.1| blr4966 [Bradyrhizobium japonicum USDA 110]
          Length = 228

 Score =  358 bits (920), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 170/194 (87%), Positives = 181/194 (93%)

Query: 1   MNHDAYDDNYIRSILNNVKTIAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGKTL 60
           MNHDAY DNYIR+ILN+VK+IAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGK L
Sbjct: 35  MNHDAYPDNYIRAILNSVKSIAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGKEL 94

Query: 61  MGKPFVASLADIDRPIDMIDIFRNSSHIMPVVDEALTLSPLPKVIWMQLGARDDAAAEKA 120
           +GKPFVAS++DI RP+DMIDIFRNSSHIMPVV+EAL L PLPKVIWMQLGARDD AA KA
Sbjct: 95  LGKPFVASMSDIGRPVDMIDIFRNSSHIMPVVEEALALDPLPKVIWMQLGARDDVAAAKA 154

Query: 121 EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPIPTQGMRLSLNRTSFGGGQT 180
           EA G+KVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAP PTQGMRLSLNR S GGG T
Sbjct: 155 EAVGIKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPAPTQGMRLSLNRMSVGGGDT 214

Query: 181 AASDRAAKNKTETT 194
           AASDRAAKNK+E +
Sbjct: 215 AASDRAAKNKSEQS 228


>ref|YP_001240530.1| hypothetical protein BBta_4595 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36624.1| hypothetical protein BBta_4595 [Bradyrhizobium sp. BTAi1]
          Length = 194

 Score =  327 bits (839), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 162/194 (83%), Positives = 178/194 (91%)

Query: 1   MNHDAYDDNYIRSILNNVKTIAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGKTL 60
           MNHD Y D+YIR ILN VK IAMVGASP  +RPS+FAFKYL QRGYDMIPVNP HVGK+L
Sbjct: 1   MNHDTYPDDYIRGILNGVKVIAMVGASPSEIRPSFFAFKYLVQRGYDMIPVNPDHVGKSL 60

Query: 61  MGKPFVASLADIDRPIDMIDIFRNSSHIMPVVDEALTLSPLPKVIWMQLGARDDAAAEKA 120
           MG+PFVASLADI RP+DM+DIFR+S HIMPVVDEAL L PLPKVIWMQLGARDDAAAEKA
Sbjct: 61  MGRPFVASLADIGRPLDMVDIFRSSQHIMPVVDEALKLQPLPKVIWMQLGARDDAAAEKA 120

Query: 121 EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPIPTQGMRLSLNRTSFGGGQT 180
           EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRT+S+KRAPIPTQGMRLSLNRTS GGG T
Sbjct: 121 EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTISAKRAPIPTQGMRLSLNRTSVGGGAT 180

Query: 181 AASDRAAKNKTETT 194
           +A+DRAAK++++ T
Sbjct: 181 SAADRAAKDRSDPT 194


>ref|YP_001992084.1| hypothetical protein Rpal_3103 [Rhodopseudomonas palustris TIE-1]
 gb|ACF01609.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 194

 Score =  318 bits (814), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/194 (77%), Positives = 174/194 (89%)

Query: 1   MNHDAYDDNYIRSILNNVKTIAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGKTL 60
           MNHD+Y DNYIR+ILN VKTIAMVGASP+NVRPSYF FKYL++RGYD+IP+NPG VGK+L
Sbjct: 1   MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSL 60

Query: 61  MGKPFVASLADIDRPIDMIDIFRNSSHIMPVVDEALTLSPLPKVIWMQLGARDDAAAEKA 120
           +GKPFVASL DIDRPIDM+D+FR S+H++PVVDE L+LSPLPKVIWMQ+G R+D AA KA
Sbjct: 61  LGKPFVASLKDIDRPIDMVDVFRGSAHVLPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKA 120

Query: 121 EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPIPTQGMRLSLNRTSFGGGQT 180
           EAAGLKVVM+RCPKIEYGRLSSEISWMGVNSRTLS+KRAPIP +GMRLSL+R S  G  T
Sbjct: 121 EAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAPIPVKGMRLSLDRQSVAGADT 180

Query: 181 AASDRAAKNKTETT 194
           AASDRA K++ E  
Sbjct: 181 AASDRAVKSRNEAV 194


>ref|NP_948107.1| CoA-binding [Rhodopseudomonas palustris CGA009]
 emb|CAE28206.1| CoA Binding Domain [Rhodopseudomonas palustris CGA009]
          Length = 194

 Score =  317 bits (813), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/194 (77%), Positives = 174/194 (89%)

Query: 1   MNHDAYDDNYIRSILNNVKTIAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGKTL 60
           MNHD+Y DNYIR+ILN VKTIAMVGASP+NVRPSYF FKYL++RGYD+IP+NPG VGK+L
Sbjct: 1   MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSL 60

Query: 61  MGKPFVASLADIDRPIDMIDIFRNSSHIMPVVDEALTLSPLPKVIWMQLGARDDAAAEKA 120
           +GKPFVASL +IDRPIDM+D+FR S+H+MPVVDE L+LSPLPKVIWMQ+G R+D AA KA
Sbjct: 61  LGKPFVASLKEIDRPIDMVDVFRGSAHVMPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKA 120

Query: 121 EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPIPTQGMRLSLNRTSFGGGQT 180
           EAAGLKVVM+RCPKIEYGRLSSEISWMGVNSRTLS+KRAPIP +GMRLSL+R S  G  T
Sbjct: 121 EAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAPIPVKGMRLSLDRQSVAGADT 180

Query: 181 AASDRAAKNKTETT 194
           AASDRA K++ E  
Sbjct: 181 AASDRAVKSRNEAV 194


>ref|YP_577707.1| CoA-binding [Nitrobacter hamburgensis X14]
 gb|ABE63247.1| CoA-binding protein [Nitrobacter hamburgensis X14]
          Length = 194

 Score =  316 bits (810), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 163/190 (85%), Positives = 175/190 (92%)

Query: 1   MNHDAYDDNYIRSILNNVKTIAMVGASPVNVRPSYFAFKYLAQRGYDMIPVNPGHVGKTL 60
           MNHDAYDD+YIR IL++VKTIAMVGASPVNVRPSYFAFKYLA+RGYDMIPVNPGHVGK+L
Sbjct: 1   MNHDAYDDSYIRGILDSVKTIAMVGASPVNVRPSYFAFKYLAERGYDMIPVNPGHVGKSL 60

Query: 61  MGKPFVASLADIDRPIDMIDIFRNSSHIMPVVDEALTLSPLPKVIWMQLGARDDAAAEKA 120
           +GKPFV SL DI RP DM+DIFR+S HIMPVVDEALTLSP PKVIWMQLGARDDAAA KA
Sbjct: 61  VGKPFVTSLKDIGRPFDMVDIFRSSIHIMPVVDEALTLSPPPKVIWMQLGARDDAAAAKA 120

Query: 121 EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPIPTQGMRLSLNRTSFGGGQT 180
           EAAG+KVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAP+P  G RLSLNR S GGG T
Sbjct: 121 EAAGIKVVMNRCPKIEYGRLSSEISWMGVNSRTLSSKRAPMPIHGQRLSLNRVSVGGGST 180

Query: 181 AASDRAAKNK 190
            A+DRAAK+K
Sbjct: 181 LAADRAAKDK 190