BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0008.p         (142 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771604.1| hypothetical protein bll4964 [Bradyrhizobium ja...   253   9e-66
ref|YP_781773.1| hypothetical protein RPE_2856 [Rhodopseudomonas...   246   8e-64
ref|YP_004109055.1| thioesterase superfamily protein [Rhodopseud...   244   3e-63
ref|YP_569836.1| phenylacetic acid degradation-like protein [Rho...   243   6e-63
ref|NP_948109.1| phenylacetic acid degradation-like protein [Rho...   243   1e-62

>ref|NP_771604.1| hypothetical protein bll4964 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50229.1| bll4964 [Bradyrhizobium japonicum USDA 110]
          Length = 142

 Score =  253 bits (645), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 123/141 (87%), Positives = 132/141 (93%)

Query: 1   MATAKMSVADVEEFLRREFPQAFVHDDVRIESADGETALLRQRFSERMLRPGGTVSGPTL 60
           MA AKMSVA+VE+FLR EFPQAF   D+ IESADG+T LLRQR+SERMLRPGGTVSGPTL
Sbjct: 1   MALAKMSVAEVEQFLRDEFPQAFSGGDITIESADGQTCLLRQRYSERMLRPGGTVSGPTL 60

Query: 61  MGLADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDVLAVAKLLKLGKRLAVGEVN 120
           M LADFAMYVVLLSAIGP+GLAVTTNLNINFLRKGQPGQDVLA A+LLKLGKRLAVGEVN
Sbjct: 61  MALADFAMYVVLLSAIGPIGLAVTTNLNINFLRKGQPGQDVLAEARLLKLGKRLAVGEVN 120

Query: 121 LLSGSSPDPIAHVTATYSIPN 141
           LLSG+SPDPIAHVT+TYSIPN
Sbjct: 121 LLSGTSPDPIAHVTSTYSIPN 141


>ref|YP_781773.1| hypothetical protein RPE_2856 [Rhodopseudomonas palustris BisA53]
 gb|ABJ06793.1| uncharacterized domain 1 [Rhodopseudomonas palustris BisA53]
          Length = 143

 Score =  246 bits (628), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 119/138 (86%), Positives = 129/138 (93%)

Query: 4   AKMSVADVEEFLRREFPQAFVHDDVRIESADGETALLRQRFSERMLRPGGTVSGPTLMGL 63
           AKMSV ++E FL+ EFPQAF +DD+ IESADG T+LLRQR+SERMLRPGGTVSGPTLM L
Sbjct: 5   AKMSVGELESFLQLEFPQAFANDDISIESADGTTSLLRQRYSERMLRPGGTVSGPTLMAL 64

Query: 64  ADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDVLAVAKLLKLGKRLAVGEVNLLS 123
           ADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDV+A AKLLKLGKRLAVGEV LLS
Sbjct: 65  ADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDVVAAAKLLKLGKRLAVGEVILLS 124

Query: 124 GSSPDPIAHVTATYSIPN 141
           G+SPDPIAHVT+TYSIPN
Sbjct: 125 GTSPDPIAHVTSTYSIPN 142


>ref|YP_004109055.1| thioesterase superfamily protein [Rhodopseudomonas palustris DX-1]
 gb|ADU44322.1| thioesterase superfamily protein [Rhodopseudomonas palustris DX-1]
          Length = 142

 Score =  244 bits (623), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/141 (82%), Positives = 130/141 (92%)

Query: 1   MATAKMSVADVEEFLRREFPQAFVHDDVRIESADGETALLRQRFSERMLRPGGTVSGPTL 60
           M  A+MSV ++EEFL+REFPQAF H D+ IE+ADG T+LLRQR+S+RMLRPGGTVSGPTL
Sbjct: 1   MTHARMSVGELEEFLQREFPQAFSHGDISIETADGRTSLLRQRYSDRMLRPGGTVSGPTL 60

Query: 61  MGLADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDVLAVAKLLKLGKRLAVGEVN 120
           M LADFAMYVVLLSAIGPV LAVTTNLNINFLRKGQPGQDV+AVA+LLKLG+RLAVGEV 
Sbjct: 61  MALADFAMYVVLLSAIGPVALAVTTNLNINFLRKGQPGQDVVAVARLLKLGRRLAVGEVT 120

Query: 121 LLSGSSPDPIAHVTATYSIPN 141
           LLSG+SPDPIAHVT+TYSIP 
Sbjct: 121 LLSGTSPDPIAHVTSTYSIPT 141


>ref|YP_569836.1| phenylacetic acid degradation-like protein [Rhodopseudomonas
           palustris BisB5]
 gb|ABE39935.1| Phenylacetic acid degradation-related protein [Rhodopseudomonas
           palustris BisB5]
          Length = 142

 Score =  243 bits (621), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 130/140 (92%)

Query: 1   MATAKMSVADVEEFLRREFPQAFVHDDVRIESADGETALLRQRFSERMLRPGGTVSGPTL 60
           M  A+MSVA++E+ L REFPQAF H D+ IE+ADG T+LLRQRF++RMLRPGGTVSGPTL
Sbjct: 1   MTHARMSVAEIEDLLHREFPQAFSHGDISIETADGRTSLLRQRFNDRMLRPGGTVSGPTL 60

Query: 61  MGLADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDVLAVAKLLKLGKRLAVGEVN 120
           M LADFAMYVVLLSAIGPV LAVTTNLNINFLRKGQPGQDV+AVA+LLKLGKRLAVGEV+
Sbjct: 61  MALADFAMYVVLLSAIGPVALAVTTNLNINFLRKGQPGQDVVAVARLLKLGKRLAVGEVS 120

Query: 121 LLSGSSPDPIAHVTATYSIP 140
           LLSG+SPDPIAHVT+TYSIP
Sbjct: 121 LLSGTSPDPIAHVTSTYSIP 140


>ref|NP_948109.1| phenylacetic acid degradation-like protein [Rhodopseudomonas
           palustris CGA009]
 ref|YP_001992086.1| thioesterase superfamily protein [Rhodopseudomonas palustris TIE-1]
 emb|CAE28208.1| Phenylacetic acid degradation-related protein:Thioesterase
           superfamily [Rhodopseudomonas palustris CGA009]
 gb|ACF01611.1| thioesterase superfamily protein [Rhodopseudomonas palustris TIE-1]
          Length = 142

 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 129/140 (92%)

Query: 1   MATAKMSVADVEEFLRREFPQAFVHDDVRIESADGETALLRQRFSERMLRPGGTVSGPTL 60
           M  A+M V ++EEFL+REFPQAF H D+ IE+ADG T+LLRQR+S+RMLRPGGTVSGPTL
Sbjct: 1   MTHARMGVGELEEFLQREFPQAFSHGDISIETADGRTSLLRQRYSDRMLRPGGTVSGPTL 60

Query: 61  MGLADFAMYVVLLSAIGPVGLAVTTNLNINFLRKGQPGQDVLAVAKLLKLGKRLAVGEVN 120
           M LADFAMYVVLLSAIGPV LAVTTNLNINFLRKGQPGQDV+AVAKLLKLG+RLAVGEV 
Sbjct: 61  MALADFAMYVVLLSAIGPVALAVTTNLNINFLRKGQPGQDVVAVAKLLKLGRRLAVGEVT 120

Query: 121 LLSGSSPDPIAHVTATYSIP 140
           LLSG+SPDPIAHVT+TYSIP
Sbjct: 121 LLSGTSPDPIAHVTSTYSIP 140