BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0005.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240526.1| 30S ribosomal protein S9 [Bradyrhizobium sp.... 290 4e-77 ref|YP_781775.1| 30S ribosomal protein S9 [Rhodopseudomonas palu... 290 5e-77 ref|ZP_08630116.1| SSU ribosomal protein S9p [Bradyrhizobiaceae ... 289 8e-77 ref|YP_486285.1| 30S ribosomal protein S9 [Rhodopseudomonas palu... 287 4e-76 ref|YP_569838.1| 30S ribosomal protein S9 [Rhodopseudomonas palu... 286 6e-76 >ref|YP_001240526.1| 30S ribosomal protein S9 [Bradyrhizobium sp. BTAi1] sp|A5EKC6.1|RS9_BRASB RecName: Full=30S ribosomal protein S9 gb|ABQ36620.1| SSU ribosomal protein S9P [Bradyrhizobium sp. BTAi1] Length = 160 Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 141/160 (88%), Positives = 153/160 (95%), Gaps = 2/160 (1%) Query: 1 MSDTLQSLDQLSQVKPA--APDAPKYIKKVDKYNRAYATGKRKDAVARVWVKPGSGKISV 58 M++++QSLDQLSQ+K A APDAPKY KKVDK+ RAYATGKRKDAVARVW+KPGSGK++V Sbjct: 1 MAESIQSLDQLSQLKGAVTAPDAPKYEKKVDKFGRAYATGKRKDAVARVWIKPGSGKVTV 60 Query: 59 NTREFEVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGISKALTNF 118 NTR+ EVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHG+SKALTNF Sbjct: 61 NTRDIEVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGLSKALTNF 120 Query: 119 EPELRGVLKKGGFLTRDSRSVERKKYGKAKARKSFQFSKR 158 EPELRGVLKKGGFLTRDSR VERKKYGKAKAR+SFQFSKR Sbjct: 121 EPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 160 >ref|YP_781775.1| 30S ribosomal protein S9 [Rhodopseudomonas palustris BisA53] sp|Q07MN9.1|RS9_RHOP5 RecName: Full=30S ribosomal protein S9 gb|ABJ06795.1| SSU ribosomal protein S9P [Rhodopseudomonas palustris BisA53] Length = 158 Score = 290 bits (742), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 140/158 (88%), Positives = 150/158 (94%) Query: 1 MSDTLQSLDQLSQVKPAAPDAPKYIKKVDKYNRAYATGKRKDAVARVWVKPGSGKISVNT 60 MSDTLQSLDQL +K +APDAP+++KKVDK+NRAYATGKRKDAVARVW+KPG+GK+ VNT Sbjct: 1 MSDTLQSLDQLGSLKVSAPDAPQHLKKVDKFNRAYATGKRKDAVARVWIKPGAGKVIVNT 60 Query: 61 REFEVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 RE EVYFARPVLRMMIQQPLVAAAR GQYDVICTVAGGGLSGQAGAVRHGISKALT FEP Sbjct: 61 REVEVYFARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTYFEP 120 Query: 121 ELRGVLKKGGFLTRDSRSVERKKYGKAKARKSFQFSKR 158 ELRGVLKKGGFLTRDSR VERKKYGKAKAR+SFQFSKR Sbjct: 121 ELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158 >ref|ZP_08630116.1| SSU ribosomal protein S9p [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07210.1| SSU ribosomal protein S9p [Bradyrhizobiaceae bacterium SG-6C] Length = 158 Score = 289 bits (740), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 141/158 (89%), Positives = 148/158 (93%) Query: 1 MSDTLQSLDQLSQVKPAAPDAPKYIKKVDKYNRAYATGKRKDAVARVWVKPGSGKISVNT 60 MSDT+QSLDQLS +K +APDAPKY KKVDK RAYATGKRKDAVARVW+KPGSGKI VNT Sbjct: 1 MSDTMQSLDQLSALKTSAPDAPKYEKKVDKQGRAYATGKRKDAVARVWIKPGSGKIVVNT 60 Query: 61 REFEVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 RE EVYFARPVLRMMIQQP+VAAAR GQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP Sbjct: 61 REVEVYFARPVLRMMIQQPIVAAARQGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 Query: 121 ELRGVLKKGGFLTRDSRSVERKKYGKAKARKSFQFSKR 158 +LR VLKKGGFLTRDSR VERKKYGKAKAR+SFQFSKR Sbjct: 121 DLRSVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158 >ref|YP_486285.1| 30S ribosomal protein S9 [Rhodopseudomonas palustris HaA2] sp|Q2IWN6.1|RS9_RHOP2 RecName: Full=30S ribosomal protein S9 gb|ABD07374.1| SSU ribosomal protein S9P [Rhodopseudomonas palustris HaA2] Length = 158 Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 138/158 (87%), Positives = 147/158 (93%) Query: 1 MSDTLQSLDQLSQVKPAAPDAPKYIKKVDKYNRAYATGKRKDAVARVWVKPGSGKISVNT 60 MS+T+QSLDQLS +K PDAP Y KKVDK+ RAYATGKRKDAVARVW+KPG+GK+ VN+ Sbjct: 1 MSETMQSLDQLSALKTTQPDAPTYTKKVDKFGRAYATGKRKDAVARVWIKPGAGKVIVNS 60 Query: 61 REFEVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 RE EVYFARPVLRMMIQQPLVAAAR GQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP Sbjct: 61 REVEVYFARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 Query: 121 ELRGVLKKGGFLTRDSRSVERKKYGKAKARKSFQFSKR 158 ELRGVLKKGGFLTRDSR VERKKYGKAKAR+SFQFSKR Sbjct: 121 ELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158 >ref|YP_569838.1| 30S ribosomal protein S9 [Rhodopseudomonas palustris BisB5] sp|Q136Q2.1|RS9_RHOPS RecName: Full=30S ribosomal protein S9 gb|ABE39937.1| SSU ribosomal protein S9P [Rhodopseudomonas palustris BisB5] Length = 158 Score = 286 bits (733), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 138/158 (87%), Positives = 146/158 (92%) Query: 1 MSDTLQSLDQLSQVKPAAPDAPKYIKKVDKYNRAYATGKRKDAVARVWVKPGSGKISVNT 60 MS+T+QSLDQLS +K PDAP Y KKVDK RAYATGKRKDAVARVW+KPG+GK++VN Sbjct: 1 MSETMQSLDQLSALKTTQPDAPTYTKKVDKQGRAYATGKRKDAVARVWIKPGAGKVTVNA 60 Query: 61 REFEVYFARPVLRMMIQQPLVAAARNGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 RE EVYFARPVLRMMIQQPLVAAAR GQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP Sbjct: 61 REVEVYFARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEP 120 Query: 121 ELRGVLKKGGFLTRDSRSVERKKYGKAKARKSFQFSKR 158 ELRGVLKKGGFLTRDSR VERKKYGKAKAR+SFQFSKR Sbjct: 121 ELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158