BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0014.0007.p         (106 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001758077.1| putative membrane-bound dehydrogenase oxidor...    69   2e-10
ref|YP_004156799.1| membrane-bound dehydrogenase oxidoreductase ...    66   2e-09
ref|YP_001769657.1| NHL repeat-containing protein [Methylobacter...    45   0.003
ref|YP_411803.1| putative membrane-bound dehydrogenase oxidoredu...    45   0.003
ref|YP_004107154.1| hypothetical protein Rpdx1_0787 [Rhodopseudo...    44   0.008

>ref|YP_001758077.1| putative membrane-bound dehydrogenase oxidoreductase protein
           [Methylobacterium radiotolerans JCM 2831]
 gb|ACB27394.1| putative membrane-bound dehydrogenase oxidoreductase protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 424

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 42/57 (73%)

Query: 31  GSPLIGRPDNEAAAKLAPVAPPPLPSATDKLPLAKLKAPAGFNVEVYAAGMPNARSL 87
           GS L GRP+  AAAKLAPVA PPL +A  KLPL KL  P GF +EVYA+G+ NAR +
Sbjct: 50  GSALYGRPEGGAAAKLAPVAGPPLATAAAKLPLDKLTVPDGFKIEVYASGLANAREM 106


>ref|YP_004156799.1| membrane-bound dehydrogenase oxidoreductase protein [Variovorax
          paradoxus EPS]
 gb|ADU38688.1| putative membrane-bound dehydrogenase oxidoreductase protein
          [Variovorax paradoxus EPS]
          Length = 398

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 27 AQQPGSPLIGRPDNEAAAKLAPVAPPPLPSATDKLPLAKLKAPAGFNVEVYAAGMPNARS 86
          A++PG    GRP NEAA +LAPV   P+P+A D+LP AK K P GF VE +A+G+ +AR 
Sbjct: 27 AEEPGWAK-GRPKNEAATRLAPVPSFPIPTAPDQLPTAKFKLPPGFKVETWASGVLDARE 85

Query: 87 LALGAR 92
          L  GA+
Sbjct: 86 LRQGAK 91


>ref|YP_001769657.1| NHL repeat-containing protein [Methylobacterium sp. 4-46]
 gb|ACA17223.1| NHL repeat containing protein [Methylobacterium sp. 4-46]
          Length = 349

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query: 54 LPSATDKLPLAKLKAPAGFNVEVYAAGMPNARSLALGAR 92
          +P+   KLP+ +LK PAGF VEV+A+G+ NARSL  G +
Sbjct: 1  MPTPAAKLPVDRLKVPAGFKVEVFASGVANARSLRQGDK 39


>ref|YP_411803.1| putative membrane-bound dehydrogenase oxidoreductase protein
          [Nitrosospira multiformis ATCC 25196]
 gb|ABB74411.1| putative membrane-bound dehydrogenase oxidoreductase protein
          [Nitrosospira multiformis ATCC 25196]
          Length = 371

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 1/40 (2%)

Query: 51 PPPLPSATDKLPLAKLKAPAGFNVEVYAAGMPNARSLALG 90
          P    S T KLPL K+K PAGF++EV+A  +PNAR LALG
Sbjct: 21 PAMADSKTGKLPLDKIKLPAGFSIEVWAE-VPNARGLALG 59


>ref|YP_004107154.1| hypothetical protein Rpdx1_0787 [Rhodopseudomonas palustris DX-1]
 gb|ADU42421.1| hypothetical protein Rpdx1_0787 [Rhodopseudomonas palustris DX-1]
          Length = 417

 Score = 43.9 bits (102), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 39  DNEAAAKLAPVAPPPLPSATDKLP--LAKLKAPAGFNVEVYAAGMPNARSLALG 90
           + EA   LAP A PP  S+  +L   + K+K P GF +EVYA+G+ +AR +A G
Sbjct: 52  ETEAQKGLAPPAGPPTGSSDAELAAMMKKIKLPPGFKIEVYASGVLSARQMAWG 105