BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0014.0004.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773377.1| pyrroloquinoline quinone biosynthesis protein P... 470 e-131 ref|YP_001207678.1| pyrroloquinoline quinone biosynthesis protei... 466 e-129 ref|YP_001242126.1| pyrroloquinoline quinone biosynthesis protei... 465 e-129 ref|YP_569167.1| pyrroloquinoline quinone biosynthesis protein P... 459 e-127 ref|YP_530770.1| pyrroloquinoline quinone biosynthesis protein P... 458 e-127 >ref|NP_773377.1| pyrroloquinoline quinone biosynthesis protein PqqC [Bradyrhizobium japonicum USDA 110] sp|Q89FG3.1|PQQC_BRAJA RecName: Full=Pyrroloquinoline-quinone synthase; AltName: Full=Coenzyme PQQ synthesis protein C; AltName: Full=Pyrroloquinoline quinone biosynthesis protein C dbj|BAC52002.1| pqqC [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 217/257 (84%), Positives = 241/257 (93%) Query: 1 VNVVPTTGMTALSIGKGITLDSAEEMEATLRTIGATRYHSLHPFHRLLHGGKLNKGQVQA 60 +N TG+TALSIGK I L+SAEE+EA LR IGATRYHSLHPFH+LLHGGKLNKGQVQA Sbjct: 1 MNAASLTGITALSIGKDIKLNSAEELEAALRHIGATRYHSLHPFHKLLHGGKLNKGQVQA 60 Query: 61 WALNRYYYQSTIPLKDAMVMTRFRDRMTRVEWRHRIEDHDGDLGSEGGIERWLKLTEGLG 120 WALNRYYYQSTIP+KDA+V++RFRDR TR+EWRHRIEDHDGD+GSEGGIERWLKLTEGLG Sbjct: 61 WALNRYYYQSTIPIKDAVVISRFRDRATRLEWRHRIEDHDGDVGSEGGIERWLKLTEGLG 120 Query: 121 LDTAYVESTEGILPATRFAVEAYVHFCRDRTPLEAIASSLTELFAPNLHEERISGMLKHY 180 LDTAYVESTEGILPATRFAVEAYVH+CR+++PLEAIASSLTELFAP++HEERI+GML+HY Sbjct: 121 LDTAYVESTEGILPATRFAVEAYVHYCREKSPLEAIASSLTELFAPSIHEERIAGMLQHY 180 Query: 181 DFVNPDIMSYFSRRLTQAPRDAGFALDYVKQHAKTPAEREAVCNALIFKTNVLWVQLDAL 240 DFVNPDIMSYF RRLTQAPRDA FAL+YV+ HA+TP ER +VCNALIFKTNVLWVQLDAL Sbjct: 181 DFVNPDIMSYFKRRLTQAPRDANFALEYVRTHARTPEERASVCNALIFKTNVLWVQLDAL 240 Query: 241 YHAYVDGQIPPGAFVPK 257 HAYV+G IPPGAFVPK Sbjct: 241 QHAYVEGHIPPGAFVPK 257 >ref|YP_001207678.1| pyrroloquinoline quinone biosynthesis protein PqqC [Bradyrhizobium sp. ORS 278] sp|A4YZY5.1|PQQC_BRASO RecName: Full=Pyrroloquinoline-quinone synthase; AltName: Full=Coenzyme PQQ synthesis protein C; AltName: Full=Pyrroloquinoline quinone biosynthesis protein C emb|CAL79461.1| pyrroloquinoline quinone biosynthesis protein C (Coenzyme PQQ synthesis protein C) [Bradyrhizobium sp. ORS 278] Length = 259 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 217/256 (84%), Positives = 237/256 (92%) Query: 4 VPTTGMTALSIGKGITLDSAEEMEATLRTIGATRYHSLHPFHRLLHGGKLNKGQVQAWAL 63 V +GMTALSIG+G+TL++A E+EA LR IGATRYH+ HPFH+LLH GKLNKGQVQAWAL Sbjct: 4 VNLSGMTALSIGRGVTLNNASELEAALRHIGATRYHNHHPFHKLLHSGKLNKGQVQAWAL 63 Query: 64 NRYYYQSTIPLKDAMVMTRFRDRMTRVEWRHRIEDHDGDLGSEGGIERWLKLTEGLGLDT 123 NRYYYQSTIPLKDAMVMTRFRDR TR+EWRHRIEDHDGD+G+EGGIERW+KLTEGLGLDT Sbjct: 64 NRYYYQSTIPLKDAMVMTRFRDRATRLEWRHRIEDHDGDVGTEGGIERWIKLTEGLGLDT 123 Query: 124 AYVESTEGILPATRFAVEAYVHFCRDRTPLEAIASSLTELFAPNLHEERISGMLKHYDFV 183 AYVESTEGILPATRFAVEAYVHFCRDR+PLEAIASSLTELFAP++HEERISGML+HY FV Sbjct: 124 AYVESTEGILPATRFAVEAYVHFCRDRSPLEAIASSLTELFAPSIHEERISGMLEHYSFV 183 Query: 184 NPDIMSYFSRRLTQAPRDAGFALDYVKQHAKTPAEREAVCNALIFKTNVLWVQLDALYHA 243 N D MSYF RRLTQAPRDA FAL YV++HA TP +R AVCNALIFKTNVLWVQLDALYHA Sbjct: 184 NNDTMSYFKRRLTQAPRDANFALHYVREHATTPEQRAAVCNALIFKTNVLWVQLDALYHA 243 Query: 244 YVDGQIPPGAFVPKTG 259 YV+G IPPGAFVPK G Sbjct: 244 YVEGHIPPGAFVPKEG 259 >ref|YP_001242126.1| pyrroloquinoline quinone biosynthesis protein PqqC [Bradyrhizobium sp. BTAi1] gb|ABQ38220.1| pyrroloquinoline quinone biosynthesis protein C [Bradyrhizobium sp. BTAi1] Length = 251 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 218/251 (86%), Positives = 234/251 (93%) Query: 9 MTALSIGKGITLDSAEEMEATLRTIGATRYHSLHPFHRLLHGGKLNKGQVQAWALNRYYY 68 MTALSIG+G+TL++A E+EA LR IGATRYH+ HPFH+LLH GKLNKGQVQAWALNRYYY Sbjct: 1 MTALSIGRGVTLNNAAELEAALRHIGATRYHNHHPFHKLLHSGKLNKGQVQAWALNRYYY 60 Query: 69 QSTIPLKDAMVMTRFRDRMTRVEWRHRIEDHDGDLGSEGGIERWLKLTEGLGLDTAYVES 128 QSTIPLKDAMVMTRFRDR TR+EWRHRIEDHDGD+GSEGGIERWLKLTEGLGLDTAYVES Sbjct: 61 QSTIPLKDAMVMTRFRDRATRLEWRHRIEDHDGDVGSEGGIERWLKLTEGLGLDTAYVES 120 Query: 129 TEGILPATRFAVEAYVHFCRDRTPLEAIASSLTELFAPNLHEERISGMLKHYDFVNPDIM 188 TEGILPATRFAVEAYVHFCRDR+PLEAIASSLTELFAP++HEERISGML+HY FVN D M Sbjct: 121 TEGILPATRFAVEAYVHFCRDRSPLEAIASSLTELFAPSIHEERISGMLEHYSFVNHDTM 180 Query: 189 SYFSRRLTQAPRDAGFALDYVKQHAKTPAEREAVCNALIFKTNVLWVQLDALYHAYVDGQ 248 SYF RRLTQAPRDA FAL YVK+HA TP +R AVCNALIFKTNVLWVQLDALYHAYV+G Sbjct: 181 SYFKRRLTQAPRDANFALHYVKEHATTPEQRAAVCNALIFKTNVLWVQLDALYHAYVEGH 240 Query: 249 IPPGAFVPKTG 259 IPPGAFVPK G Sbjct: 241 IPPGAFVPKEG 251 >ref|YP_569167.1| pyrroloquinoline quinone biosynthesis protein PqqC [Rhodopseudomonas palustris BisB5] gb|ABE39266.1| Coenzyme PQQ biosynthesis protein C [Rhodopseudomonas palustris BisB5] Length = 251 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 215/251 (85%), Positives = 231/251 (92%) Query: 9 MTALSIGKGITLDSAEEMEATLRTIGATRYHSLHPFHRLLHGGKLNKGQVQAWALNRYYY 68 MTA SI +L SA+E+EA LR IGA RYH+LHPFHRLLHGG+L KGQVQAWALNRYYY Sbjct: 1 MTAFSINGAASLRSADELEAALRQIGAARYHNLHPFHRLLHGGQLTKGQVQAWALNRYYY 60 Query: 69 QSTIPLKDAMVMTRFRDRMTRVEWRHRIEDHDGDLGSEGGIERWLKLTEGLGLDTAYVES 128 QSTIP+KDA+V++RFRDR TRVEWRHRIEDHDGD+GSEGGIERWLKLTEGLGLD+AYVES Sbjct: 61 QSTIPIKDAVVISRFRDRATRVEWRHRIEDHDGDIGSEGGIERWLKLTEGLGLDSAYVES 120 Query: 129 TEGILPATRFAVEAYVHFCRDRTPLEAIASSLTELFAPNLHEERISGMLKHYDFVNPDIM 188 TEGILPATRFAV+AYVHF RDRTPLEAIASSLTELFAPNLHEERISGML HYDFVNP+IM Sbjct: 121 TEGILPATRFAVDAYVHFVRDRTPLEAIASSLTELFAPNLHEERISGMLAHYDFVNPEIM 180 Query: 189 SYFSRRLTQAPRDAGFALDYVKQHAKTPAEREAVCNALIFKTNVLWVQLDALYHAYVDGQ 248 SYF RRL QAPRDA FALDYVK+HA TPAEREAVCNALIFKTNVLW QLDAL+HAYVDG Sbjct: 181 SYFKRRLAQAPRDADFALDYVKRHAATPAEREAVCNALIFKTNVLWAQLDALHHAYVDGH 240 Query: 249 IPPGAFVPKTG 259 IPPGAFVP+ G Sbjct: 241 IPPGAFVPQAG 251 >ref|YP_530770.1| pyrroloquinoline quinone biosynthesis protein PqqC [Rhodopseudomonas palustris BisB18] gb|ABD86451.1| Coenzyme PQQ biosynthesis protein C [Rhodopseudomonas palustris BisB18] Length = 258 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 211/255 (82%), Positives = 233/255 (91%) Query: 5 PTTGMTALSIGKGITLDSAEEMEATLRTIGATRYHSLHPFHRLLHGGKLNKGQVQAWALN 64 P GM+A S+ + L A+++EA LR IGATRYH+LHPFHRLLHGGKLNKGQVQAWALN Sbjct: 4 PVYGMSAFSLARNTELQDADQLEAALRQIGATRYHNLHPFHRLLHGGKLNKGQVQAWALN 63 Query: 65 RYYYQSTIPLKDAMVMTRFRDRMTRVEWRHRIEDHDGDLGSEGGIERWLKLTEGLGLDTA 124 RYYYQ +IP+KDA+V++RFRDR TRVEWRHR+EDHDGDLG+EGGIERWLKLTEGLGLD+A Sbjct: 64 RYYYQCSIPIKDAVVISRFRDRATRVEWRHRLEDHDGDLGAEGGIERWLKLTEGLGLDSA 123 Query: 125 YVESTEGILPATRFAVEAYVHFCRDRTPLEAIASSLTELFAPNLHEERISGMLKHYDFVN 184 YVESTEGILPATRFAV+AYVHF RDRTPLEAIASSLTELFAPNLHEERI+GML+HYDFVN Sbjct: 124 YVESTEGILPATRFAVDAYVHFVRDRTPLEAIASSLTELFAPNLHEERIAGMLEHYDFVN 183 Query: 185 PDIMSYFSRRLTQAPRDAGFALDYVKQHAKTPAEREAVCNALIFKTNVLWVQLDALYHAY 244 P IM+YF RRL QAPRDA FALDYVK+HA TPAEREAVCNALIFKTNVLW QLDAL+HAY Sbjct: 184 PQIMTYFKRRLQQAPRDAQFALDYVKRHADTPAEREAVCNALIFKTNVLWAQLDALHHAY 243 Query: 245 VDGQIPPGAFVPKTG 259 VDGQIPPGAFVP+ Sbjct: 244 VDGQIPPGAFVPEAN 258