BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0037.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774090.1| hypothetical protein blr7450 [Bradyrhizobium ja... 531 e-149 ref|ZP_01910995.1| hypothetical protein PPSIR1_41434 [Plesiocyst... 327 2e-87 gb|EGF25996.1| hypothetical protein RBWH47_02199 [Rhodopirellula... 309 3e-82 ref|NP_870958.1| hypothetical protein RB13273 [Rhodopirellula ba... 309 4e-82 ref|YP_003796174.1| hypothetical protein NIDE0473 [Candidatus Ni... 306 2e-81 >ref|NP_774090.1| hypothetical protein blr7450 [Bradyrhizobium japonicum USDA 110] dbj|BAC52715.1| blr7450 [Bradyrhizobium japonicum USDA 110] Length = 342 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 263/292 (90%), Positives = 277/292 (94%) Query: 1 LRPHTWISSEWFSPADVPGIAIPFYLAHPRLMKLEKKMMLDVEGASWSECMAILRHEAGH 60 LRPHTWISSEWFSP DVPGIAIPFYLAHPRLMKLEKKMM DVEG +W ECMAILRHEAGH Sbjct: 51 LRPHTWISSEWFSPGDVPGIAIPFYLAHPRLMKLEKKMMFDVEGGTWRECMAILRHEAGH 110 Query: 61 AVQHGYQLQRRRRWQQLFGPSSQHYPRYYRPNPASRNYVQHLRLWYAQSHPDEDFAETFA 120 A+QHGYQLQRRRRWQQLFGPSS+HYPRYYRPNPASR YVQHLRLWYAQSHPDEDFAETFA Sbjct: 111 AIQHGYQLQRRRRWQQLFGPSSKHYPRYYRPNPASRRYVQHLRLWYAQSHPDEDFAETFA 170 Query: 121 VWLRPRSNWRTRYAGWPALKKLEYVDELMGEIAGKRPLLATRERVDPLHTLKQTLAEHYR 180 VWLRPRSNWRTRYAGWPALKKLEYVDELMGEIAGKRPL+ TRERVDPL L QTL +HY+ Sbjct: 171 VWLRPRSNWRTRYAGWPALKKLEYVDELMGEIAGKRPLITTRERVDPLSKLGQTLEDHYK 230 Query: 181 KKQAFYAFTPPKTYDRDLSKLFSXDPRHYRRPPAAAFIRRHRAQIRQLVARWTGENQLTL 240 KKQAFYAFTPPKTYDRDLS+LFS DPRH+R PA++ IRRHRAQIRQLVARWTGENQLTL Sbjct: 231 KKQAFYAFTPPKTYDRDLSRLFSADPRHHRSKPASSLIRRHRAQIRQLVARWTGENQLTL 290 Query: 241 DAVLDDMISRCRELNLRAVGPEQKLVTNFTILLTAKTMHALFGPSRRKWIAL 292 DAVLDDMISRCREL+LRAVGPEQKLV +FT+L+TAKTMHALFGPSRRKWIAL Sbjct: 291 DAVLDDMISRCRELDLRAVGPEQKLVLDFTVLVTAKTMHALFGPSRRKWIAL 342 >ref|ZP_01910995.1| hypothetical protein PPSIR1_41434 [Plesiocystis pacifica SIR-1] gb|EDM76087.1| hypothetical protein PPSIR1_41434 [Plesiocystis pacifica SIR-1] Length = 330 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 159/287 (55%), Positives = 203/287 (70%), Gaps = 2/287 (0%) Query: 6 WISSEWFSPADVPGIAIPFYLAHPRLMKLEKKMMLDVEGASWSECMAILRHEAGHAVQHG 65 W+S EW SPA VPG+ +PFYLAHPRL++LE+ ML+VEG + +CM +LRHE GHA+ H Sbjct: 46 WLSDEWLSPAGVPGVGVPFYLAHPRLIRLERSQMLEVEGGTRKQCMMLLRHELGHAIDHA 105 Query: 66 YQLQRRRRWQQLFGPSSQHYPRYYRPNPASRNYVQHLRLWYAQSHPDEDFAETFAVWLRP 125 Y+L RR+RW++ FG SSQ YP +YRPNPASR +VQHL WYAQ+HPDEDFAETFAVWL P Sbjct: 106 YRLHRRQRWREAFGSSSQPYPEWYRPNPASRRFVQHLDAWYAQAHPDEDFAETFAVWLNP 165 Query: 126 RSNWRTRYAGWPALKKLEYVDELMGEIAGKRPLLATRERVDPLHTLKQTLAEHYRKKQAF 185 RS WR RYA WPAL+KLE VD+LM IAG P + +RER L + + L +Y++K+ Sbjct: 166 RSRWRERYATWPALRKLEAVDQLMDAIAGTEPAVRSRERPYSLPSFRLRLKTYYKRKRER 225 Query: 186 YAFTPPKTYDRDLSKLFSXDPRHYRRPPAAAFIRRHRAQIRQLVARWTGENQLTLDAVLD 245 + YD DL +LF R P AAAF+R+H A+IR V RWT +LT+D VL Sbjct: 226 FNPGYSTNYDDDLRRLFDEGTNSKRAPTAAAFLRKHSAEIRGHVVRWTEGQELTVDYVLR 285 Query: 246 DMISRCRELNLRAVGPEQKLVTNFTILLTAKTMHALFGPSRRKWIAL 292 MI RCREL LRA GP+Q+L+ +F+ILLT +M L+ R+W A+ Sbjct: 286 HMIGRCRELGLRAKGPKQQLLMDFSILLTVHSMTYLY--RGREWHAM 330 >gb|EGF25996.1| hypothetical protein RBWH47_02199 [Rhodopirellula baltica WH47] Length = 353 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 144/279 (51%), Positives = 193/279 (69%) Query: 3 PHTWISSEWFSPADVPGIAIPFYLAHPRLMKLEKKMMLDVEGASWSECMAILRHEAGHAV 62 PH W+S +WFSP ++PGIAIPFYLAHPRLM+LE+K +L+VEG + CM ILRHEAGHA+ Sbjct: 66 PHCWLSEDWFSPDEIPGIAIPFYLAHPRLMRLERKQLLEVEGGTHEWCMKILRHEAGHAI 125 Query: 63 QHGYQLQRRRRWQQLFGPSSQHYPRYYRPNPASRNYVQHLRLWYAQSHPDEDFAETFAVW 122 ++L+R+ ++ FG +S YP YY+P P+SR+YV HL +WYAQ HP EDFAETFAVW Sbjct: 126 DTAFRLRRKAIYRNTFGKTSLPYPEYYQPKPSSRDYVLHLDMWYAQVHPLEDFAETFAVW 185 Query: 123 LRPRSNWRTRYAGWPALKKLEYVDELMGEIAGKRPLLATRERVDPLHTLKQTLAEHYRKK 182 LRP S WRTRY WPA++KL+ V+ELM + GK+P + R +DP+ +++TL HY +K Sbjct: 186 LRPGSRWRTRYKDWPAIEKLKMVNELMTSLQGKKPRVQCRATLDPISRIRKTLRTHYERK 245 Query: 183 QAFYAFTPPKTYDRDLSKLFSXDPRHYRRPPAAAFIRRHRAQIRQLVARWTGENQLTLDA 242 + Y P YD DL +LFS D H R AAAF+ R R ++R VA+WTGE T+D Sbjct: 246 RQHYGLDLPSVYDNDLRRLFSSDDAHRRNVTAAAFLSRIRTELRGSVAKWTGEYAYTIDQ 305 Query: 243 VLDDMISRCRELNLRAVGPEQKLVTNFTILLTAKTMHAL 281 V+ +MI RCREL LR ++ + IL+ +T + L Sbjct: 306 VIQEMIERCRELQLRLGASPEETKRDAMILVAVRTTNFL 344 >ref|NP_870958.1| hypothetical protein RB13273 [Rhodopirellula baltica SH 1] emb|CAD78036.1| hypothetical protein RB13273 [Rhodopirellula baltica SH 1] Length = 353 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 144/279 (51%), Positives = 193/279 (69%) Query: 3 PHTWISSEWFSPADVPGIAIPFYLAHPRLMKLEKKMMLDVEGASWSECMAILRHEAGHAV 62 PH W+S +WFSP ++PGIAIPFYLAHPRLM+LE+K +L+VEG + CM ILRHEAGHA+ Sbjct: 66 PHCWLSEDWFSPDEIPGIAIPFYLAHPRLMRLERKQLLEVEGGTHEWCMKILRHEAGHAI 125 Query: 63 QHGYQLQRRRRWQQLFGPSSQHYPRYYRPNPASRNYVQHLRLWYAQSHPDEDFAETFAVW 122 ++L+R+ ++ FG +S YP YY+P P+SR+YV HL +WYAQ HP EDFAETFAVW Sbjct: 126 DTAFRLRRKAIYRNTFGKTSLPYPEYYQPKPSSRDYVLHLDMWYAQVHPLEDFAETFAVW 185 Query: 123 LRPRSNWRTRYAGWPALKKLEYVDELMGEIAGKRPLLATRERVDPLHTLKQTLAEHYRKK 182 LRP S WRTRY WPA++KL+ V+ELM + GK+P + R +DP+ +++TL HY +K Sbjct: 186 LRPGSRWRTRYKDWPAIEKLKMVNELMTSLQGKKPRVQCRATLDPISRIRKTLRTHYERK 245 Query: 183 QAFYAFTPPKTYDRDLSKLFSXDPRHYRRPPAAAFIRRHRAQIRQLVARWTGENQLTLDA 242 + Y P YD DL +LFS D H R AAAF+ R R ++R VA+WTGE T+D Sbjct: 246 RQHYGLDLPSVYDNDLRRLFSSDDAHRRNVTAAAFLSRIRTELRGSVAKWTGEYAYTIDQ 305 Query: 243 VLDDMISRCRELNLRAVGPEQKLVTNFTILLTAKTMHAL 281 V+ +MI RCREL LR ++ + IL+ +T + L Sbjct: 306 VIQEMIERCRELQLRLGASPEETKRDAMILVAVRTTNFL 344 >ref|YP_003796174.1| hypothetical protein NIDE0473 [Candidatus Nitrospira defluvii] emb|CBK40248.1| conserved protein of unknown function [Candidatus Nitrospira defluvii] Length = 353 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 157/281 (55%), Positives = 200/281 (71%) Query: 1 LRPHTWISSEWFSPADVPGIAIPFYLAHPRLMKLEKKMMLDVEGASWSECMAILRHEAGH 60 RPH WIS EWF+P VPGIA+PFYLAHPRL KLE ML+VEG + CM ILRHEAGH Sbjct: 64 FRPHFWISDEWFTPDGVPGIAVPFYLAHPRLAKLEATQMLEVEGGTRDWCMRILRHEAGH 123 Query: 61 AVQHGYQLQRRRRWQQLFGPSSQHYPRYYRPNPASRNYVQHLRLWYAQSHPDEDFAETFA 120 A+++ Y L+RRRR Q+LFG SSQ YP YY P P SR++V+HL +WYAQSHPDEDFAETFA Sbjct: 124 AIENAYLLRRRRRRQKLFGRSSQPYPEYYTPRPYSRSFVRHLDVWYAQSHPDEDFAETFA 183 Query: 121 VWLRPRSNWRTRYAGWPALKKLEYVDELMGEIAGKRPLLATRERVDPLHTLKQTLAEHYR 180 VWL P S W+ RY GWP +KKL+++D LMGE+AG P++ R+ +DPL + +TL +HY Sbjct: 184 VWLDPHSLWKERYRGWPVMKKLDFMDRLMGELAGTTPVVTGRQLLDPLPRIYKTLRDHYE 243 Query: 181 KKQAFYAFTPPKTYDRDLSKLFSXDPRHYRRPPAAAFIRRHRAQIRQLVARWTGENQLTL 240 +K+ Y +YD DL KLFS P + + P AA F+RR R +IR+ VA WTGE Q T+ Sbjct: 244 EKRKHYGIGRTPSYDTDLKKLFSDGPAYAKNPSAAEFLRRTRKEIRRRVAEWTGEYQYTI 303 Query: 241 DAVLDDMISRCRELNLRAVGPEQKLVTNFTILLTAKTMHAL 281 D VL+ MI RC+ L +++ +F ILLT +TM+ L Sbjct: 304 DQVLEGMIERCQASKLHLTQHKEQAKLDFAILLTVQTMNYL 344