BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0028.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766730.1| ABC transporter ATP-binding protein [Bradyrhizo... 384 e-104 ref|YP_001243240.1| ABC transporter ATP-binding protein [Bradyrh... 379 e-103 ref|YP_001202870.1| ABC transporter ATP-binding protein [Bradyrh... 372 e-101 ref|YP_779048.1| ABC transporter-like protein [Rhodopseudomonas ... 371 e-101 ref|YP_567400.1| ABC transporter-like protein [Rhodopseudomonas ... 371 e-101 >ref|NP_766730.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45355.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 271 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 193/250 (77%), Positives = 216/250 (86%) Query: 1 VRLRGVSKTYDSGVRALGPLDLDVRRGEFVSLLGPSGCGKSTALRLIAGLAAPSAGTVEV 60 V LRGV+K YD+GV ALGPLDL VR+GEF+SLLGPSGCGKSTALRLIA L+APS+G V + Sbjct: 19 VSLRGVTKVYDNGVMALGPLDLAVRKGEFISLLGPSGCGKSTALRLIAQLSAPSSGIVRL 78 Query: 61 SHHGAEQRGSHRIGFVFQEPTLMPWATVRDNVRLPLKLARLPATSADARIDAALDQVGLA 120 + H + H IGFVFQEPTLMPW +VR+NVRLPLKLA + A AR D AL VGLA Sbjct: 79 ARHEGPAQPGHGIGFVFQEPTLMPWTSVRENVRLPLKLAGVAKAEARARADEALASVGLA 138 Query: 121 EFARAYPRELSGGMKMRVSLARALVTDPDVLLMDEPFAALDEITRFRLNNDLLSLWRSLH 180 +FA AYPRELSGGMKMRVSLARALVTDPD+LLMDEPFAALDEITRFRLNNDLL+LWRSL Sbjct: 139 DFADAYPRELSGGMKMRVSLARALVTDPDILLMDEPFAALDEITRFRLNNDLLALWRSLR 198 Query: 181 KTVIFVTHSVFESVYLSQRVIVMTARPGRIGAEFRITSPEPRGEEFRTSAEYAAFCREVS 240 KTVIFVTHSVFESVYLSQRV+VMTARPGRI A+ RI + EPRGEEFRTSA Y+ +CR+VS Sbjct: 199 KTVIFVTHSVFESVYLSQRVVVMTARPGRIQADIRIETVEPRGEEFRTSAAYSDYCRKVS 258 Query: 241 SALAPSYAGQ 250 +ALAPSY+GQ Sbjct: 259 AALAPSYSGQ 268 >ref|YP_001243240.1| ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ39334.1| Putative ABC transporter, ATP-binding protein [Bradyrhizobium sp. BTAi1] Length = 267 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/249 (74%), Positives = 211/249 (84%) Query: 1 VRLRGVSKTYDSGVRALGPLDLDVRRGEFVSLLGPSGCGKSTALRLIAGLAAPSAGTVEV 60 VRLRGV+K Y+SGV ALGP+DL + RGEFVSLLGPSGCGKSTALRLIAGLA+PS+GT+++ Sbjct: 15 VRLRGVTKIYESGVAALGPIDLSIGRGEFVSLLGPSGCGKSTALRLIAGLASPSSGTLDI 74 Query: 61 SHHGAEQRGSHRIGFVFQEPTLMPWATVRDNVRLPLKLARLPATSADARIDAALDQVGLA 120 + + R HRIGFVFQEPTLMPW +VRDNV LPLKLA +PA A IDAAL QVGL+ Sbjct: 75 AAASSAPRPGHRIGFVFQEPTLMPWTSVRDNVGLPLKLAHVPAAEARTGIDAALAQVGLS 134 Query: 121 EFARAYPRELSGGMKMRVSLARALVTDPDVLLMDEPFAALDEITRFRLNNDLLSLWRSLH 180 +FA A+PRELSGGMKMR SLARALVT PD+LLMDEPFAALDEITRFRLNNDLL+LWRSL Sbjct: 135 DFADAFPRELSGGMKMRASLARALVTRPDILLMDEPFAALDEITRFRLNNDLLALWRSLS 194 Query: 181 KTVIFVTHSVFESVYLSQRVIVMTARPGRIGAEFRITSPEPRGEEFRTSAEYAAFCREVS 240 TV+FVTHSVFESVYLSQRV+VMTARPGR+ AE +I + PR + FR SA YA +CR VS Sbjct: 195 MTVLFVTHSVFESVYLSQRVLVMTARPGRLSAEIKIDADAPRDDAFRASAAYAGYCRRVS 254 Query: 241 SALAPSYAG 249 ALAP+Y G Sbjct: 255 DALAPAYTG 263 >ref|YP_001202870.1| ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74630.1| Putative ABC transporter, ATP-binding protein [Bradyrhizobium sp. ORS 278] Length = 266 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/249 (74%), Positives = 209/249 (83%), Gaps = 1/249 (0%) Query: 1 VRLRGVSKTYDSGVRALGPLDLDVRRGEFVSLLGPSGCGKSTALRLIAGLAAPSAGTVEV 60 VRLRGV+K YDSGV ALGP+DL + +GEFVSLLGPSGCGKSTALRLIAGLA PS+GT++V Sbjct: 15 VRLRGVTKVYDSGVAALGPIDLSIAKGEFVSLLGPSGCGKSTALRLIAGLADPSSGTLDV 74 Query: 61 SHHGAEQRGSHRIGFVFQEPTLMPWATVRDNVRLPLKLARLPATSADARIDAALDQVGLA 120 + + HRIGFVFQEPTLMPW +VRDNV LPLKLA +PA+ A RI+AAL QVGLA Sbjct: 75 AVSASTAHPGHRIGFVFQEPTLMPWTSVRDNVGLPLKLAHVPASEARPRIEAALAQVGLA 134 Query: 121 EFARAYPRELSGGMKMRVSLARALVTDPDVLLMDEPFAALDEITRFRLNNDLLSLWRSLH 180 +FA A+PRELSGGMKMR SLARALVT PD+LLMDEPFAALDEITRFRLNNDLL+LWRSL+ Sbjct: 135 DFADAFPRELSGGMKMRASLARALVTRPDILLMDEPFAALDEITRFRLNNDLLALWRSLN 194 Query: 181 KTVIFVTHSVFESVYLSQRVIVMTARPGRIGAEFRITSPEPRGEEFRTSAEYAAFCREVS 240 TV+FVTHSVFESVYLSQRV+VMTARPGR+ AE I S R + FR S YA +CR VS Sbjct: 195 MTVLFVTHSVFESVYLSQRVLVMTARPGRLSAEIHIASAT-RDDAFRASPAYAEYCRRVS 253 Query: 241 SALAPSYAG 249 ALAP+Y G Sbjct: 254 DALAPAYTG 262 >ref|YP_779048.1| ABC transporter-like protein [Rhodopseudomonas palustris BisA53] gb|ABJ04068.1| ABC transporter related [Rhodopseudomonas palustris BisA53] Length = 271 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/244 (75%), Positives = 204/244 (83%) Query: 1 VRLRGVSKTYDSGVRALGPLDLDVRRGEFVSLLGPSGCGKSTALRLIAGLAAPSAGTVEV 60 VRL ++K Y +G ALGPLDL+VR GEFVSLLGPSGCGKSTALRLIAGLA PS+G ++V Sbjct: 19 VRLSAITKFYRAGTPALGPLDLEVRSGEFVSLLGPSGCGKSTALRLIAGLARPSSGALQV 78 Query: 61 SHHGAEQRGSHRIGFVFQEPTLMPWATVRDNVRLPLKLARLPATSADARIDAALDQVGLA 120 + H + RG IGFVFQEPTLMPWA+VR NV LPLKLARLP AR+D AL QVGL Sbjct: 79 AAHASRGRGEQAIGFVFQEPTLMPWASVRGNVGLPLKLARLPRGEIAARVDRALSQVGLR 138 Query: 121 EFARAYPRELSGGMKMRVSLARALVTDPDVLLMDEPFAALDEITRFRLNNDLLSLWRSLH 180 +FA A+PRELSGGMKMR SLARALVTDPD+LL+DEPFAALDEITRFRLNNDL+ LWR L Sbjct: 139 DFAEAFPRELSGGMKMRASLARALVTDPDILLLDEPFAALDEITRFRLNNDLIDLWRDLR 198 Query: 181 KTVIFVTHSVFESVYLSQRVIVMTARPGRIGAEFRITSPEPRGEEFRTSAEYAAFCREVS 240 KTVIFVTHSVFESVYLSQRV+VMT RPGRI AEF IT+ E RGE FRTS +YAA CREVS Sbjct: 199 KTVIFVTHSVFESVYLSQRVLVMTPRPGRIAAEFTITAEESRGEAFRTSVDYAAHCREVS 258 Query: 241 SALA 244 ALA Sbjct: 259 QALA 262 >ref|YP_567400.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB5] gb|ABE37499.1| ABC transporter related [Rhodopseudomonas palustris BisB5] Length = 270 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/250 (72%), Positives = 208/250 (83%) Query: 1 VRLRGVSKTYDSGVRALGPLDLDVRRGEFVSLLGPSGCGKSTALRLIAGLAAPSAGTVEV 60 +RLR +K Y GV ALGP+DLD+ RGEFVSLLG SGCGKSTALRLIAGLA PS+G+V V Sbjct: 18 IRLRAATKVYRGGVEALGPIDLDIGRGEFVSLLGSSGCGKSTALRLIAGLAKPSSGSVRV 77 Query: 61 SHHGAEQRGSHRIGFVFQEPTLMPWATVRDNVRLPLKLARLPATSADARIDAALDQVGLA 120 + +RG H IGFVFQEPTLMPW++VR NV LPLK+A PA +DAAL +V L+ Sbjct: 78 AGEATRRRGGHAIGFVFQEPTLMPWSSVRANVGLPLKIAHAPAAEIARHVDAALARVELS 137 Query: 121 EFARAYPRELSGGMKMRVSLARALVTDPDVLLMDEPFAALDEITRFRLNNDLLSLWRSLH 180 +FA AYPRELSGGMKMRVSLARALVTDPD+LLMDEPFAALDEITRFRLN+DLL+LWR L Sbjct: 138 DFAEAYPRELSGGMKMRVSLARALVTDPDILLMDEPFAALDEITRFRLNDDLLALWRDLG 197 Query: 181 KTVIFVTHSVFESVYLSQRVIVMTARPGRIGAEFRITSPEPRGEEFRTSAEYAAFCREVS 240 KT++FVTHSVFESVYLSQRV+VM+ RPGRI AEFRI +PEPRG+EFRTS YAA CR+VS Sbjct: 198 KTILFVTHSVFESVYLSQRVVVMSPRPGRIAAEFRIEAPEPRGDEFRTSTGYAAQCRDVS 257 Query: 241 SALAPSYAGQ 250 ALA + A Q Sbjct: 258 RALADASAAQ 267