BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0013.p (311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766741.1| hypothetical protein blr0101 [Bradyrhizobium ja... 357 2e-96 ref|YP_001243254.1| hypothetical protein BBta_7496 [Bradyrhizobi... 309 4e-82 ref|YP_001202859.1| hypothetical protein BRADO0690 [Bradyrhizobi... 289 5e-76 ref|YP_004106527.1| hypothetical protein Rpdx1_0150 [Rhodopseudo... 279 4e-73 ref|YP_530460.1| hypothetical protein RPC_0566 [Rhodopseudomonas... 276 2e-72 >ref|NP_766741.1| hypothetical protein blr0101 [Bradyrhizobium japonicum USDA 110] dbj|BAC45366.1| blr0101 [Bradyrhizobium japonicum USDA 110] Length = 309 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 171/307 (55%), Positives = 223/307 (72%), Gaps = 4/307 (1%) Query: 5 SQRIFLETIKKYCLAHAIAVEVRSGGWLVTMTKGNARRLAIGYDVGLNSAVAHQVANDKS 64 S+RIF++ I++YC H IAV++R+GGWL+ M +G AR A GYD+GLNSA+AH++ANDKS Sbjct: 4 SERIFVQAIRRYCARHGIAVDIRAGGWLIAMRRGEARHFAFGYDIGLNSAIAHRLANDKS 63 Query: 65 ACADVLALAGVPAIPHTLFLGAKFSKHIPGSDSLDAMQRLLEQHPQGLVIKPNEGTSGEL 124 A A+ L+L VP +PH LFL H+ G +AM LL QHPQG+V+KPNEGTSG Sbjct: 64 ATAEALSLEAVPCVPHHLFLNPSMGAHVAGPGWREAMLALLAQHPQGVVVKPNEGTSGRA 123 Query: 125 VFRVTTRAQLETAVARILAAHPSLAISPYVEIADEVRVVLLDARALIVYGKTRPSVVGDG 184 VF+VT+ A+L+ AV + ++ L I+PYVEI +EVRV+LLD + +IVY K RPSVVGDG Sbjct: 124 VFKVTSAAELDRAVCEVFSSGLGLVIAPYVEIEEEVRVILLDRKPMIVYRKDRPSVVGDG 183 Query: 185 IQSLRALAQASATTEQLKTITEDFDAAALDAVPPAGERLLLNWRHNLDAGAEPVLLADDA 244 +LR LA A+ QL+ + +A ++AV P G+R +LNWRHNLDAGA PVL+ + Sbjct: 184 EHTLRELAIAAGHDGQLR----ELEAREVNAVVPNGKRRILNWRHNLDAGARPVLMENGE 239 Query: 245 TREACVALAIKAAQAVGIRFASIDVVRTEGVWKILEVNSGVKMEALGRRHPALVEAAYSA 304 R ACV LA+ AA A+GI FASIDVVR +G W++LE+NSGV MEAL + HP LV+A Y A Sbjct: 240 VRAACVRLAVDAANAIGIAFASIDVVRVDGAWRVLEINSGVMMEALAKLHPELVQATYDA 299 Query: 305 ALDEVFA 311 ALD VF Sbjct: 300 ALDRVFG 306 >ref|YP_001243254.1| hypothetical protein BBta_7496 [Bradyrhizobium sp. BTAi1] gb|ABQ39348.1| hypothetical protein BBta_7496 [Bradyrhizobium sp. BTAi1] Length = 317 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 159/305 (52%), Positives = 207/305 (67%), Gaps = 6/305 (1%) Query: 10 LETIKKYCLAHAIAVEVRSGGWLVTMTKGNARRLAIGYDVGLNSAVAHQVANDKSACADV 69 L + +YC + +E+R GGWL+++ R L GYD+GLNSAVAH++A DK+A A + Sbjct: 9 LAAVTRYCAKRGLRLEIRDGGWLLSLEDATRRHLIFGYDLGLNSAVAHRIACDKAATAGL 68 Query: 70 LALAGVPAIPHTLFLGAKFSKHIPGSDSLDAMQRLLEQHPQGLVIKPNEGTSGELVFRVT 129 L +GVPA+PH FL + + A+ LLE HP G+V+KPNEGTSG V R Sbjct: 69 LTASGVPAVPHAFFLAPAVTG--AAEPAWTAILELLEAHPHGVVVKPNEGTSGRAVRRAA 126 Query: 130 TRAQLETAVARILAAHPSLAISPYVEIADEVRVVLLDARALIVYGKTRPSVVGDGIQSLR 189 + A+L+ AV I S+AI+P +EIADEVRV++LD LIVY K RP V GDG+ SLR Sbjct: 127 SPAELKDAVTHIFKTGASVAIAPLLEIADEVRVIMLDDVPLIVYRKQRPVVTGDGVHSLR 186 Query: 190 ALAQASATTEQ----LKTITEDFDAAALDAVPPAGERLLLNWRHNLDAGAEPVLLADDAT 245 LA A A +Q L+ + ++FD +AL AV P GE+ LL+WRHNL+ GA+PVLL D Sbjct: 187 ELALAIAPAQQHPQLLRRLADEFDVSALHAVIPPGEQSLLSWRHNLEFGAQPVLLTDGPV 246 Query: 246 REACVALAIKAAQAVGIRFASIDVVRTEGVWKILEVNSGVKMEALGRRHPALVEAAYSAA 305 RE C ALA KAA+ + IR+AS+DVV G W++LE+NSGVKMEALGR P LVEAAY AA Sbjct: 247 RETCTALARKAARVIDIRYASVDVVMAGGHWQVLEINSGVKMEALGRHAPELVEAAYVAA 306 Query: 306 LDEVF 310 LD++F Sbjct: 307 LDKIF 311 >ref|YP_001202859.1| hypothetical protein BRADO0690 [Bradyrhizobium sp. ORS 278] emb|CAL74619.1| Conserved hypothetical protein; putative glutathione synthetase ATP-binding domain-like [Bradyrhizobium sp. ORS 278] Length = 320 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 161/308 (52%), Positives = 205/308 (66%), Gaps = 10/308 (3%) Query: 10 LETIKKYCLAHAIAVEVRSGGWLVTMTKGNARRLAIGYDVGLNSAVAHQVANDKSACADV 69 L + +YC I ++VR GWL+ + R L GYD GLNSAVAH++A DK+A A + Sbjct: 9 LAAVTRYCAERGIRLDVRDDGWLLVLEDATRRHLIFGYDFGLNSAVAHRIACDKAATAGL 68 Query: 70 LALAGVPAIPHTLFLGAKFSKHIPGSDSLD--AMQRLLEQHPQGLVIKPNEGTSGELVFR 127 L AGVPA+PH L + GS D + +LE HP GLV+KPNEGTSG V Sbjct: 69 LTAAGVPAVPHAFLLAPALT----GSRDPDWTPILNMLEAHPAGLVVKPNEGTSGRGVTP 124 Query: 128 VTTRAQLETAVARILAAHPSLAISPYVEIADEVRVVLLDARALIVYGKTRPSVVGDGIQS 187 VT+ A L+ A+ RI A S+AI+P +EIADEVRV+LLD LIVY K RP+V GDG+ S Sbjct: 125 VTSSADLKDAINRIFDAGASVAIAPLMEIADEVRVILLDDIPLIVYRKQRPAVTGDGVHS 184 Query: 188 LRALAQASATTEQ----LKTITEDFDAAALDAVPPAGERLLLNWRHNLDAGAEPVLLADD 243 LR LA AS +E L+ + ++F LDA+ P GE+ LL+WRHNL+ GA P+LLAD Sbjct: 185 LRELAIASEPSELHDQLLRRLRDEFSEPLLDAIVPRGEQRLLSWRHNLELGARPMLLADG 244 Query: 244 ATREACVALAIKAAQAVGIRFASIDVVRTEGVWKILEVNSGVKMEALGRRHPALVEAAYS 303 RE C ALA +AA A+ IR+AS+DVV T+G W++LE+NSGVKME LGR P LVEAA Sbjct: 245 RVRETCSALAREAAGAINIRYASVDVVLTDGRWQVLEINSGVKMETLGRHAPELVEAACF 304 Query: 304 AALDEVFA 311 AALD++F Sbjct: 305 AALDKIFG 312 >ref|YP_004106527.1| hypothetical protein Rpdx1_0150 [Rhodopseudomonas palustris DX-1] gb|ADU41794.1| hypothetical protein Rpdx1_0150 [Rhodopseudomonas palustris DX-1] Length = 316 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 144/308 (46%), Positives = 201/308 (65%), Gaps = 2/308 (0%) Query: 5 SQRIFLETIKKYCLAHAIAVEVRSGGWLVTMTKGNARRLAIGYDVGLNSAVAHQVANDKS 64 + R+ + ++ YC A + V + GWL+ + KG+AR GYD GLNS+V H++ANDK+ Sbjct: 4 ADRVIVRIVEAYCGARGVDVTLELDGWLIVLAKGDARHFIYGYDFGLNSSVTHRLANDKA 63 Query: 65 ACADVLALAGVPAIPHTLFLGAKFSKHIPGSDSLDAMQRLLEQHPQGLVIKPNEGTSGEL 124 A AD+L AG+ +PH LF+ + K++P AM +L HP GLV+KPNEGT G L Sbjct: 64 ATADILGAAGIACVPHRLFMNHEHFKYVPDRGHWSAMLEMLRDHPAGLVLKPNEGTCGHL 123 Query: 125 VFRVTTRAQLETAVARILAAHPSLAISPYVEIADEVRVVLLDARALIVYGKTRPSVVGDG 184 VF+ TT +LE A A I AA+ +LAI+PY +IA EVRV+LLD L+VY K RP+++GDG Sbjct: 124 VFKATTELELERAAAAIFAANQNLAIAPYFDIAREVRVILLDRAPLVVYEKKRPAIIGDG 183 Query: 185 IQSLRALAQASATTEQLKTITEDFDA--AALDAVPPAGERLLLNWRHNLDAGAEPVLLAD 242 +S L + ++L T+ + A AALDAV PAG + L+WRHNL+ GAEP L+ D Sbjct: 184 ERSALQLLIGAVPADRLGTVLANLPAGHAALDAVVPAGAQFPLDWRHNLEFGAEPELIGD 243 Query: 243 DATREACVALAIKAAQAVGIRFASIDVVRTEGVWKILEVNSGVKMEALGRRHPALVEAAY 302 R CV +A +AA+A+G+ F ++DVV T ++LE+NSGV +E+L RR P L E Y Sbjct: 244 GELRATCVTIAAEAARAIGLGFGAVDVVWTAQGPRVLEINSGVMIESLSRRFPDLAEQVY 303 Query: 303 SAALDEVF 310 + ALD V Sbjct: 304 TLALDRVM 311 >ref|YP_530460.1| hypothetical protein RPC_0566 [Rhodopseudomonas palustris BisB18] gb|ABD86141.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 349 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 139/311 (44%), Positives = 195/311 (62%), Gaps = 2/311 (0%) Query: 1 VVLISQRIFLETIKKYCLAHAIAVEVRSGGWLVTMTKGNARRLAIGYDVGLNSAVAHQVA 60 V+ + R ++ YC + VE GWL+ M+KG + GYDVGLNS+V H++A Sbjct: 33 VMQYANRAIARVVETYCKQNGFDVEFGLDGWLMVMSKGVIKHYIYGYDVGLNSSVVHRIA 92 Query: 61 NDKSACADVLALAGVPAIPHTLFLGAKFSKHIPGSDSLDAMQRLLEQHPQGLVIKPNEGT 120 NDKSA A++LA G+ +PH LF+ K++P M ++ +HP+GLV+KPNEGT Sbjct: 93 NDKSATAEILASCGIDCVPHALFMNHNQFKYVPLGGHWTRMLQMQGEHPEGLVLKPNEGT 152 Query: 121 SGELVFRVTTRAQLETAVARILAAHPSLAISPYVEIADEVRVVLLDARALIVYGKTRPSV 180 G LVF+V T +LE A I A + +LA++PY++I E+RV+LLD L+VY K RPSV Sbjct: 153 CGNLVFKVATELELEQAATAIFAVNQNLAVAPYLDIDREIRVILLDQHPLVVYEKQRPSV 212 Query: 181 VGDGIQSLRALAQASATTEQLKTITEDF--DAAALDAVPPAGERLLLNWRHNLDAGAEPV 238 +GDG++S L + L T + + LDAV P GE LNWRHNLD GAEP Sbjct: 213 IGDGVRSAFELVLDRVPAQLLATTLSNLPPNRTLLDAVLPEGETFFLNWRHNLDLGAEPE 272 Query: 239 LLADDATREACVALAIKAAQAVGIRFASIDVVRTEGVWKILEVNSGVKMEALGRRHPALV 298 LL D A V +A +AAQA+G+ F +IDVV ++ +ILE+NSGV +E+L +RHP L Sbjct: 273 LLHDGPHWRASVDIAGRAAQAIGLAFGAIDVVWSKQTPRILEINSGVMIESLSKRHPDLA 332 Query: 299 EAAYSAALDEV 309 + Y+ ALD++ Sbjct: 333 QRVYTQALDKI 343