BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0008.p (318 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766742.1| glutamate/aspartate periplasmic binding protein... 479 e-133 ref|YP_001202858.1| ABC transporter substrate-binding protein [B... 455 e-126 ref|YP_001774081.1| extracellular solute-binding protein [Burkho... 285 9e-75 ref|YP_625449.1| extracellular solute-binding protein [Burkholde... 283 2e-74 ref|ZP_02894730.1| extracellular solute-binding protein family 3... 281 1e-73 >ref|NP_766742.1| glutamate/aspartate periplasmic binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45367.1| glutamate/aspartate periplasmic binding protein precursor [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/304 (75%), Positives = 253/304 (83%), Gaps = 1/304 (0%) Query: 16 LSTCLLSACL-LAASLLAAPASAQPAGEGLSPTLANIKATHTVRIGYRESSPPFSFLDHS 74 L+ ++ CL LAASLLA A AQ EGLSPTL+ IK H VR+GYRESSPPFSFLD S Sbjct: 5 LTRSVIGGCLWLAASLLATTALAQTGSEGLSPTLSAIKKAHVVRLGYRESSPPFSFLDQS 64 Query: 75 NRPIGYSLELCDAIVEEIGTEVDDANLKVDYVKVTSDDRIPAVVDKKIDLECGSTTANAE 134 RPIGYSLELC+AIVEEIG EVDD NLK+DYVKVTSDDRI AV+ KIDLECGSTTANAE Sbjct: 65 GRPIGYSLELCEAIVEEIGVEVDDPNLKIDYVKVTSDDRIDAVLQNKIDLECGSTTANAE 124 Query: 135 RGKLVAFSPLMFVAGTKLMVPKASGVTQVADLKGKTVVVTKGTTNEQAMHNVDAKQKLGL 194 R K VAFSPLMFVAGTKLMVPKAS V + DLKGKT+VVTKGTTNEQA+ D K LGL Sbjct: 125 RAKRVAFSPLMFVAGTKLMVPKASSVQSLTDLKGKTIVVTKGTTNEQAIQAADKKSSLGL 184 Query: 195 NIVTAPDHEQSYQMLVDGKADAFATDDILLYGLIARHKSQDKFRVTGDYLSYDPYGIMYR 254 I DHEQS+QML DGKADAFATDDILL GLIARHK+QDK+RVTGDYLSYDPYGIM+R Sbjct: 185 TIAVGADHEQSFQMLADGKADAFATDDILLSGLIARHKAQDKYRVTGDYLSYDPYGIMFR 244 Query: 255 KGEPQMKDVVERAFRRLASNRDIVPLYNKWFVARLPTGEKLNVALSPQLEEAFKALDDSP 314 KGEPQ+ VVER FR+L SNRD+VPLYNKWF ARLPTGE+LNV +S QLEEAFKA+DDS Sbjct: 245 KGEPQLSAVVERTFRKLGSNRDLVPLYNKWFTARLPTGERLNVPISLQLEEAFKAMDDSA 304 Query: 315 GGSN 318 +N Sbjct: 305 SANN 308 >ref|YP_001202858.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74618.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS 278] Length = 308 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 222/306 (72%), Positives = 248/306 (81%), Gaps = 7/306 (2%) Query: 19 CLLSACLLAASLLAAPASAQP------AGEGLSPTLANIKATHTVRIGYRESSPPFSFLD 72 C++ A L A+LLA A AQP AGEGLSPTLA IKA H V +GYRESSPPFSFLD Sbjct: 4 CVVVASLTVAALLAC-AGAQPGIAQSGAGEGLSPTLAAIKARHVVNLGYRESSPPFSFLD 62 Query: 73 HSNRPIGYSLELCDAIVEEIGTEVDDANLKVDYVKVTSDDRIPAVVDKKIDLECGSTTAN 132 + RPIGYSLELC+AIVEEIG E+DD L++ YVKVTSDDRI AVV +IDLECGSTTAN Sbjct: 63 QAGRPIGYSLELCEAIVEEIGGEIDDPGLRIAYVKVTSDDRIDAVVAGRIDLECGSTTAN 122 Query: 133 AERGKLVAFSPLMFVAGTKLMVPKASGVTQVADLKGKTVVVTKGTTNEQAMHNVDAKQKL 192 AER + V+FSPL+FVAGTKLMV K S V DL+GK+VVVTKGTTNE AM VD K L Sbjct: 123 AERSRQVSFSPLIFVAGTKLMVSKGSPVASATDLRGKSVVVTKGTTNEAAMREVDRKSAL 182 Query: 193 GLNIVTAPDHEQSYQMLVDGKADAFATDDILLYGLIARHKSQDKFRVTGDYLSYDPYGIM 252 GL +VTA DHEQSYQMLVDGK DAFATDDILL GLIARHK+QDK R+ GDYLSYDPYGIM Sbjct: 183 GLTVVTATDHEQSYQMLVDGKVDAFATDDILLSGLIARHKAQDKMRIVGDYLSYDPYGIM 242 Query: 253 YRKGEPQMKDVVERAFRRLASNRDIVPLYNKWFVARLPTGEKLNVALSPQLEEAFKALDD 312 +RK EPQ+ VVERAFRRL SN D++PLYNKWFV RLPTGE+LN A+SPQLE+AF LDD Sbjct: 243 FRKDEPQLAAVVERAFRRLGSNHDLIPLYNKWFVRRLPTGERLNAAISPQLEQAFHVLDD 302 Query: 313 SPGGSN 318 SP +N Sbjct: 303 SPAANN 308 >ref|YP_001774081.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gb|ACA95586.1| extracellular solute-binding protein family 3 [Burkholderia cenocepacia MC0-3] Length = 313 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 138/281 (49%), Positives = 200/281 (71%), Gaps = 3/281 (1%) Query: 32 AAPASAQP-AGEGLSPTLANIKATHTVRIGYRESSPPFSFLDHSNRPIGYSLELCDAIVE 90 + P+ +P A L+ TLA ++ + T+ +GYR++S PFS+L+ N+PIGYS+ELC A+V Sbjct: 29 STPSRGEPFAPAQLTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVA 88 Query: 91 EIGTEVDDANLKVDYVKVTSDDRIPAVVDKKIDLECGSTTANAERGKLVAFSPLMFVAGT 150 I ++ + L + +V VTSD+RI AVV K+DLECGSTT+N ER K VAFSP+ FVAGT Sbjct: 89 SIEDAINQS-LTIRWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVAFSPIFFVAGT 147 Query: 151 KLMVPKASGVTQVADLKGKTVVVTKGTTNEQAMHNVDAKQKLGLNIVTAPDHEQSYQMLV 210 K+MV + + + DL GK V VT GTTNE+A+ +++ K +LG+ + PDH Q + ++ Sbjct: 148 KVMVKRGAPIRSFRDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVA 207 Query: 211 DGKADAFATDDILLYGLIARHKSQ-DKFRVTGDYLSYDPYGIMYRKGEPQMKDVVERAFR 269 +G ADAFATDD+LLYGLIA + S+ ++ V GD+LSYDPYGIM+RK +PQ+ VV+ F+ Sbjct: 208 NGGADAFATDDVLLYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQVVKTTFQ 267 Query: 270 RLASNRDIVPLYNKWFVARLPTGEKLNVALSPQLEEAFKAL 310 LA++ +I Y +WF+ LP+G LN+ +SPQLE +A+ Sbjct: 268 ELAADGEIARQYKRWFLRPLPSGLSLNLPMSPQLETIIEAI 308 >ref|YP_625449.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] ref|YP_839597.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gb|ABF80476.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia AU 1054] gb|ABK12704.1| amino acid ABC transporter substrate-binding protein, PAAT family [Burkholderia cenocepacia HI2424] Length = 313 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 134/268 (50%), Positives = 194/268 (72%), Gaps = 2/268 (0%) Query: 44 LSPTLANIKATHTVRIGYRESSPPFSFLDHSNRPIGYSLELCDAIVEEIGTEVDDANLKV 103 L+ TLA ++ + T+ +GYR++S PFS+L+ N+PIGYS+ELC A+V I ++ + L + Sbjct: 42 LTGTLAKVRGSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVASIEDAINQS-LTI 100 Query: 104 DYVKVTSDDRIPAVVDKKIDLECGSTTANAERGKLVAFSPLMFVAGTKLMVPKASGVTQV 163 +V VTSD+RI AVV K+DLECGSTT+N ER K VAFSP+ FVAGTK+MV + + + Sbjct: 101 RWVPVTSDNRIDAVVSGKVDLECGSTTSNLERQKRVAFSPIFFVAGTKVMVKRGAPIRSF 160 Query: 164 ADLKGKTVVVTKGTTNEQAMHNVDAKQKLGLNIVTAPDHEQSYQMLVDGKADAFATDDIL 223 DL GK V VT GTTNE+A+ +++ K +LG+ + PDH Q + ++ +G ADAFATDD+L Sbjct: 161 RDLAGKKVAVTAGTTNEKALRDLNDKFRLGVQLQVVPDHAQGFALVANGSADAFATDDVL 220 Query: 224 LYGLIARHKSQ-DKFRVTGDYLSYDPYGIMYRKGEPQMKDVVERAFRRLASNRDIVPLYN 282 LYGLIA + S+ ++ V GD+LSYDPYGIM+RK +PQ+ +V+ F+ LA++ +I Y Sbjct: 221 LYGLIAENASKGGQYDVVGDFLSYDPYGIMFRKDDPQLAQIVKSTFQELAADGEIARQYK 280 Query: 283 KWFVARLPTGEKLNVALSPQLEEAFKAL 310 +WF+ LP+G LN+ +SPQLE +A+ Sbjct: 281 RWFLRPLPSGLSLNLPMSPQLETIIEAI 308 >ref|ZP_02894730.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] gb|EDS99687.1| extracellular solute-binding protein family 3 [Burkholderia ambifaria IOP40-10] Length = 313 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 139/281 (49%), Positives = 197/281 (70%), Gaps = 3/281 (1%) Query: 32 AAPASAQP-AGEGLSPTLANIKATHTVRIGYRESSPPFSFLDHSNRPIGYSLELCDAIVE 90 A P +P A L+ TLA ++++ T+ +GYR++S PFS+L+ N+PIGYS+ELC A+V Sbjct: 29 APPPRVEPLAPAQLTGTLAKVRSSGTIALGYRDASIPFSYLNARNQPIGYSIELCKALVS 88 Query: 91 EIGTEVDDANLKVDYVKVTSDDRIPAVVDKKIDLECGSTTANAERGKLVAFSPLMFVAGT 150 I V+ + L + +V VTSD+RI AV +DLECGSTT+N ER + VAFSP++FVAGT Sbjct: 89 SIEDAVNKS-LTIRWVPVTSDNRIDAVASGNVDLECGSTTSNLERQQRVAFSPIIFVAGT 147 Query: 151 KLMVPKASGVTQVADLKGKTVVVTKGTTNEQAMHNVDAKQKLGLNIVTAPDHEQSYQMLV 210 K+MV + S + DL GK V VT GTTNE+A+ ++DA+ KLG+ + APDH Q + ++ Sbjct: 148 KVMVKRGSPIRSFRDLAGKKVAVTAGTTNEKALRDLDARFKLGIQLQVAPDHAQGFALVA 207 Query: 211 DGKADAFATDDILLYGLIARHKSQ-DKFRVTGDYLSYDPYGIMYRKGEPQMKDVVERAFR 269 G+ADAFATDD+LLYGLIA + + ++ V GDYLSYDPYGIM+RK +PQ+ VV+ F Sbjct: 208 SGRADAFATDDVLLYGLIAENAGKGGQYDVVGDYLSYDPYGIMFRKDDPQLAQVVKSTFE 267 Query: 270 RLASNRDIVPLYNKWFVARLPTGEKLNVALSPQLEEAFKAL 310 LA + +I Y +WF+ LP+G LN+ +S QL+ +A+ Sbjct: 268 ELAVDGEISRQYKRWFLRPLPSGVSLNLPMSQQLKTIIEAI 308