BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0007.p (429 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766743.1| proton glutamate symport protein [Bradyrhizobiu... 758 0.0 ref|YP_001202857.1| putative sodium:dicarboxylate symporter [Bra... 753 0.0 ref|YP_004489035.1| sodium:dicarboxylate symporter [Delftia sp. ... 520 e-145 ref|YP_001811271.1| sodium:dicarboxylate symporter [Burkholderia... 507 e-141 ref|ZP_04947604.1| Na+/H+-dicarboxylate symporter [Burkholderia ... 505 e-141 >ref|NP_766743.1| proton glutamate symport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45368.1| proton glutamate symport protein [Bradyrhizobium japonicum USDA 110] Length = 432 Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/431 (86%), Positives = 406/431 (94%), Gaps = 2/431 (0%) Query: 1 MSSRFTQYILIAMVLGIAMGTIVFNYFPDSRAEIAADVNLIAMLFLRLIKMIIAPLVFAT 60 MS+RFTQYIL AMVLGI MG+ ++N+ PD+RA+ A+ +NLIAM+FLRLIKMIIAPLVFAT Sbjct: 1 MSNRFTQYILGAMVLGIIMGSAIYNFLPDTRADWASSINLIAMMFLRLIKMIIAPLVFAT 60 Query: 61 LVGGIAHMGSGAKLGRIFAKTMGWFVSASFVSLLLGLVMVNLLQPGANFPGTLPDKAQST 120 LVGGIAHMGSGAKLGRIFAKTMGWF+SASFVSL+LGL+MVNLLQPGANFPGTLP QST Sbjct: 61 LVGGIAHMGSGAKLGRIFAKTMGWFISASFVSLMLGLIMVNLLQPGANFPGTLPAAGQST 120 Query: 121 GLPVSAFSIEKFLTHLIPTSIADAMAQNEILQIVVFAVFFAVALGAMPERAKPIMSLIDD 180 GLPVSAFSIEKFLTHLIPTSIADAMAQNEILQIV+FAVFF+VA+GAMPER+KPI++LIDD Sbjct: 121 GLPVSAFSIEKFLTHLIPTSIADAMAQNEILQIVIFAVFFSVAMGAMPERSKPILALIDD 180 Query: 181 LAHIMLKVTGYVMLFAPLAVWAAIMATVSKNGLGVLWKLIVFMGGFYLSLLILWGILVVV 240 + HIMLKVT YVMLFAPLAVWAAI ATV+KNGL VLWKL+VFMGGFYLSL +LW ILV+V Sbjct: 181 IGHIMLKVTSYVMLFAPLAVWAAITATVAKNGLLVLWKLVVFMGGFYLSLALLWTILVIV 240 Query: 241 GFIVIGPRYSHLLRLIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRISAFVLPLGYSF 300 GFIVIGPRYSHLL+LIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRIS+FVLPLGYSF Sbjct: 241 GFIVIGPRYSHLLKLIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRISSFVLPLGYSF 300 Query: 301 NLDGTMMYCTFASIFIAQTYHIEMSIGTQLAMLATLMITSKGVAGVPRASLVVIASTLAQ 360 NLDGTMMYCTFASIFIAQ+YHI+M +GTQLAMLATLMITSKGVAGVPRASLVVIASTLAQ Sbjct: 301 NLDGTMMYCTFASIFIAQSYHIDMPLGTQLAMLATLMITSKGVAGVPRASLVVIASTLAQ 360 Query: 361 FNIPEAGLLMIMGIDTFLDMGRSATNVIGNSLATAVVAKWEGELKAEHELGPDDAVPQDA 420 FNIPEAGLLMIMGIDTFLDMGRSATNVIGN+LAT+VVAKWEGEL EH +GP DAVP D Sbjct: 361 FNIPEAGLLMIMGIDTFLDMGRSATNVIGNTLATSVVAKWEGELGPEHAMGPGDAVPDDM 420 Query: 421 VPGAV--MAGH 429 VPG V MAGH Sbjct: 421 VPGEVPAMAGH 431 >ref|YP_001202857.1| putative sodium:dicarboxylate symporter [Bradyrhizobium sp. ORS 278] emb|CAL74617.1| putative sodium:dicarboxylate symporter [Bradyrhizobium sp. ORS 278] Length = 431 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/431 (87%), Positives = 403/431 (93%), Gaps = 2/431 (0%) Query: 1 MSSRFTQYILIAMVLGIAMGTIVFNYFPDSRAEIAADVNLIAMLFLRLIKMIIAPLVFAT 60 MS+RFTQYILIAMVLGI MGT++FN PDSR E+AAD+NL+AMLFLRLIKMIIAPLVFAT Sbjct: 1 MSNRFTQYILIAMVLGIVMGTLIFNLLPDSRIELAADINLVAMLFLRLIKMIIAPLVFAT 60 Query: 61 LVGGIAHMGSGAKLGRIFAKTMGWFVSASFVSLLLGLVMVNLLQPGANFPGTLPDKAQST 120 LVGGIAHMGSGAKLGRIFAKTMGWF+SASFVSLLLGLVMVNLLQPGANFPGTLPDK QST Sbjct: 61 LVGGIAHMGSGAKLGRIFAKTMGWFLSASFVSLLLGLVMVNLLQPGANFPGTLPDKGQST 120 Query: 121 GLPVSAFSIEKFLTHLIPTSIADAMAQNEILQIVVFAVFFAVALGAMPERAKPIMSLIDD 180 LPVSAFSIEKFLTHLIPTSIADAMAQNEILQIV+FAVFF++A+GA+PER+K ++ LIDD Sbjct: 121 SLPVSAFSIEKFLTHLIPTSIADAMAQNEILQIVIFAVFFSIAMGALPERSKALLQLIDD 180 Query: 181 LAHIMLKVTGYVMLFAPLAVWAAIMATVSKNGLGVLWKLIVFMGGFYLSLLILWGILVVV 240 + HIMLKVT Y MLFAPLAVWAAI ATV+KNGLGVLWKL+VFMGGFYLSLL+LW ILVVV Sbjct: 181 VGHIMLKVTSYFMLFAPLAVWAAITATVAKNGLGVLWKLVVFMGGFYLSLLLLWAILVVV 240 Query: 241 GFIVIGPRYSHLLRLIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRISAFVLPLGYSF 300 GF+VIGPRYSHLL+LIREPLMIAFSTASSEAAYPKTLEGLNRFGAS RIS+FVLPLGYSF Sbjct: 241 GFVVIGPRYSHLLKLIREPLMIAFSTASSEAAYPKTLEGLNRFGASKRISSFVLPLGYSF 300 Query: 301 NLDGTMMYCTFASIFIAQTYHIEMSIGTQLAMLATLMITSKGVAGVPRASLVVIASTLAQ 360 NLDGTMMYCTFASIFIAQTY IEM +GTQLAMLATLMITSKGVAGVPRASLVVIASTL+Q Sbjct: 301 NLDGTMMYCTFASIFIAQTYKIEMPLGTQLAMLATLMITSKGVAGVPRASLVVIASTLSQ 360 Query: 361 FNIPEAGLLMIMGIDTFLDMGRSATNVIGNSLATAVVAKWEGELKAEHELGPDDAVPQDA 420 F IPEAGLLMIMGIDTFLDMGRSATNVIGN+LAT+VVAKWEGEL EH LGP D VP D Sbjct: 361 FGIPEAGLLMIMGIDTFLDMGRSATNVIGNTLATSVVAKWEGELGPEHALGPSDVVPPDM 420 Query: 421 VPGAV--MAGH 429 +PG V MAG Sbjct: 421 IPGEVPAMAGQ 431 >ref|YP_004489035.1| sodium:dicarboxylate symporter [Delftia sp. Cs1-4] gb|AEF90680.1| sodium:dicarboxylate symporter [Delftia sp. Cs1-4] Length = 438 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 255/410 (62%), Positives = 327/410 (79%), Gaps = 2/410 (0%) Query: 8 YILIAMVLGIAMGTIVFNYFPDSRA--EIAADVNLIAMLFLRLIKMIIAPLVFATLVGGI 65 +IL+AMVLGI +G +VF FPD +A +IA +++++ +FLRLIKM+I PLVF+TLV GI Sbjct: 10 WILVAMVLGIVIGYMVFINFPDKKAAAQIAGYISIMSDVFLRLIKMLIGPLVFSTLVVGI 69 Query: 66 AHMGSGAKLGRIFAKTMGWFVSASFVSLLLGLVMVNLLQPGANFPGTLPDKAQSTGLPVS 125 AHMG A +GR+F K MGWFV+AS VSL++GLV+ NLLQPG N LPD S L + Sbjct: 70 AHMGDAASVGRVFLKAMGWFVTASLVSLVMGLVLANLLQPGHNLGLPLPDIGASANLATA 129 Query: 126 AFSIEKFLTHLIPTSIADAMAQNEILQIVVFAVFFAVALGAMPERAKPIMSLIDDLAHIM 185 F+++ F++HL+P S A+AMA NEILQIVVF++FF VAL A+ E+ + +++ ID+L+H+M Sbjct: 130 KFTLKDFVSHLVPKSFAEAMANNEILQIVVFSMFFGVALAALGEKGRTLVAAIDELSHVM 189 Query: 186 LKVTGYVMLFAPLAVWAAIMATVSKNGLGVLWKLIVFMGGFYLSLLILWGILVVVGFIVI 245 LK+TGYVM APLAV AA+ ATVS NGL +L K VFMG FYL L +LWG+LV+ GF+ + Sbjct: 190 LKITGYVMKLAPLAVLAAMAATVSVNGLEILLKFAVFMGDFYLGLFLLWGVLVIAGFLFL 249 Query: 246 GPRYSHLLRLIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRISAFVLPLGYSFNLDGT 305 GPR LL LI+E M++F+TASSEAAYPK L+ L+RFG +IS+FV+P+GYSFNLDG+ Sbjct: 250 GPRIFRLLVLIKEAFMLSFATASSEAAYPKILDALDRFGVKRKISSFVMPMGYSFNLDGS 309 Query: 306 MMYCTFASIFIAQTYHIEMSIGTQLAMLATLMITSKGVAGVPRASLVVIASTLAQFNIPE 365 MMYCTFA +FIAQ Y I +S+GTQ+ ML LM+TSKG+AGVPRASLVVIA+TL QFNIPE Sbjct: 310 MMYCTFAVLFIAQAYDIHLSLGTQITMLLILMLTSKGMAGVPRASLVVIAATLNQFNIPE 369 Query: 366 AGLLMIMGIDTFLDMGRSATNVIGNSLATAVVAKWEGELKAEHELGPDDA 415 AGLL+I+G+DTFLDMGRSATN +GNS+ATAVVAKWEG+L E E + A Sbjct: 370 AGLLLILGVDTFLDMGRSATNAVGNSIATAVVAKWEGDLLPETEAAANAA 419 >ref|YP_001811271.1| sodium:dicarboxylate symporter [Burkholderia ambifaria MC40-6] gb|ACB67055.1| sodium:dicarboxylate symporter [Burkholderia ambifaria MC40-6] Length = 442 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/413 (60%), Positives = 322/413 (77%), Gaps = 4/413 (0%) Query: 1 MSSRFTQ--YILIAMVLGIAMGTIVFNYFPDSRA--EIAADVNLIAMLFLRLIKMIIAPL 56 M+ R + +IL+AM GI +G +++ FPD +A EIA ++L++ +FLRLIKM+I PL Sbjct: 1 MNKRMSAAVWILLAMAAGIFIGYMIYTSFPDKKATTEIAGYISLVSDVFLRLIKMVIGPL 60 Query: 57 VFATLVGGIAHMGSGAKLGRIFAKTMGWFVSASFVSLLLGLVMVNLLQPGANFPGTLPDK 116 VF+TLV GIAHMG A +GR+F K GWFV+AS +SLLLGL M NLL+PG N LPD Sbjct: 61 VFSTLVVGIAHMGDAASVGRVFVKAFGWFVTASLISLLLGLFMANLLRPGDNLGLPLPDI 120 Query: 117 AQSTGLPVSAFSIEKFLTHLIPTSIADAMAQNEILQIVVFAVFFAVALGAMPERAKPIMS 176 S L S F+++ F+ H++P S A+AM+ NEILQIVVF++FF VAL A+ ER K +++ Sbjct: 121 GASANLATSKFTLKDFVGHMVPKSFAEAMSNNEILQIVVFSMFFGVALAALGERGKILVA 180 Query: 177 LIDDLAHIMLKVTGYVMLFAPLAVWAAIMATVSKNGLGVLWKLIVFMGGFYLSLLILWGI 236 ID LAH+MLK+TGYVM APLAV AA+ +TV+ NGL +L K VFMG FY+SL +LW Sbjct: 181 AIDQLAHVMLKITGYVMKLAPLAVLAAMASTVAINGLSILLKFAVFMGDFYVSLFLLWST 240 Query: 237 LVVVGFIVIGPRYSHLLRLIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRISAFVLPL 296 LV G + +G R LL LI+E M++F+TASSEAAYPK L+ L+RFG +IS+FV+P+ Sbjct: 241 LVAAGLLFLGRRVFKLLALIKEAFMLSFATASSEAAYPKILDALDRFGVRRKISSFVMPM 300 Query: 297 GYSFNLDGTMMYCTFASIFIAQTYHIEMSIGTQLAMLATLMITSKGVAGVPRASLVVIAS 356 GYSFNLDG+MMYCTFAS+FIAQ Y+I +S+GTQ+ ML LM+TSKG+AGVPRASLVVIA+ Sbjct: 301 GYSFNLDGSMMYCTFASLFIAQAYNIHLSLGTQITMLLVLMLTSKGMAGVPRASLVVIAA 360 Query: 357 TLAQFNIPEAGLLMIMGIDTFLDMGRSATNVIGNSLATAVVAKWEGELKAEHE 409 TL QF+IPEAGLL+I+G+DTFLDMGRSATN +GNS+A+AVVAKWEGEL +E E Sbjct: 361 TLHQFDIPEAGLLLILGVDTFLDMGRSATNAVGNSIASAVVAKWEGELMSESE 413 >ref|ZP_04947604.1| Na+/H+-dicarboxylate symporter [Burkholderia dolosa AUO158] gb|EAY70775.1| Na+/H+-dicarboxylate symporter [Burkholderia dolosa AUO158] Length = 442 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 247/404 (61%), Positives = 320/404 (79%), Gaps = 2/404 (0%) Query: 8 YILIAMVLGIAMGTIVFNYFPD--SRAEIAADVNLIAMLFLRLIKMIIAPLVFATLVGGI 65 +IL+AM GI +G +++ FPD S AEIA ++L++ +FLRLIKM+I PLVF+TLV GI Sbjct: 10 WILLAMAAGIFIGYLIYTQFPDKQSAAEIAGYISLVSDVFLRLIKMVIGPLVFSTLVVGI 69 Query: 66 AHMGSGAKLGRIFAKTMGWFVSASFVSLLLGLVMVNLLQPGANFPGTLPDKAQSTGLPVS 125 AHMG + +GR+F K GWFV+AS +SLLLG++M N+L+PG N LPD +S L S Sbjct: 70 AHMGDASSVGRVFVKAFGWFVTASLISLLLGMLMANVLRPGENLGLPLPDVGESAHLATS 129 Query: 126 AFSIEKFLTHLIPTSIADAMAQNEILQIVVFAVFFAVALGAMPERAKPIMSLIDDLAHIM 185 F+++ F+ H++P SIA+AMA NEILQIVVF++FF VAL A+ ER K +++ ID LAH+M Sbjct: 130 KFTLKDFVGHMVPKSIAEAMANNEILQIVVFSMFFGVALAALGERGKILVAAIDQLAHVM 189 Query: 186 LKVTGYVMLFAPLAVWAAIMATVSKNGLGVLWKLIVFMGGFYLSLLILWGILVVVGFIVI 245 LK+TGYVM APLAV AA+ +TV+ NGL +L K +FMG FY+SL +LW LV G + + Sbjct: 190 LKITGYVMKLAPLAVLAAMASTVAINGLSILLKFAMFMGHFYVSLSLLWATLVAAGLLFL 249 Query: 246 GPRYSHLLRLIREPLMIAFSTASSEAAYPKTLEGLNRFGASSRISAFVLPLGYSFNLDGT 305 G R LL LI+E M++F+TASSEAAYPK L+ L+RFG +IS+FV+P+GYSFNLDG+ Sbjct: 250 GRRVFKLLVLIKEAFMLSFATASSEAAYPKILDALDRFGVRRKISSFVMPMGYSFNLDGS 309 Query: 306 MMYCTFASIFIAQTYHIEMSIGTQLAMLATLMITSKGVAGVPRASLVVIASTLAQFNIPE 365 MMYCTFAS+FIAQ Y I +S+GTQ+ ML LM+TSKG+AGVPRASLVVIA+TL QFNIPE Sbjct: 310 MMYCTFASLFIAQAYGIHLSLGTQVTMLLVLMLTSKGMAGVPRASLVVIAATLHQFNIPE 369 Query: 366 AGLLMIMGIDTFLDMGRSATNVIGNSLATAVVAKWEGELKAEHE 409 AGLL+I+G+DTFLDMGRSATN +GNS+A+AVVAKWEGEL +E + Sbjct: 370 AGLLLILGVDTFLDMGRSATNAVGNSIASAVVAKWEGELMSESD 413