BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0006.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_766744.1| oxidoreductase [Bradyrhizobium japonicum USDA 1...   162   2e-38
ref|YP_779055.1| alcohol dehydrogenase [Rhodopseudomonas palustr...   161   3e-38
ref|ZP_08629187.1| quinone oxidoreductase [Bradyrhizobiaceae bac...   152   2e-35
ref|YP_004106526.1| alcohol dehydrogenase zinc-binding domain-co...   152   2e-35
ref|NP_945828.1| putative oxidoreductase [Rhodopseudomonas palus...   149   2e-34

>ref|NP_766744.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45369.1| blr0103 [Bradyrhizobium japonicum USDA 110]
          Length = 333

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 85/98 (86%)

Query: 1  MNDTVNRQILLVEKPTGKLGPEHFRLTKGTIPTPKDGEALVRTRYISLDAANRAWMHGAT 60
          M+ ++NRQILLVEKP+GKLGPEHF++  G +P PKDGEAL+R RYISLDAANRAWMHGAT
Sbjct: 1  MSGSINRQILLVEKPSGKLGPEHFKMVDGAMPEPKDGEALLRVRYISLDAANRAWMHGAT 60

Query: 61 YRAAVEANTVMAGGSIAEVISSNDPGLKPGDIVFGXAG 98
          YR+AVEAN+VMAGG IAEV+SS  PGL  GDIVFG  G
Sbjct: 61 YRSAVEANSVMAGGGIAEVVSSKAPGLAAGDIVFGDTG 98


>ref|YP_779055.1| alcohol dehydrogenase [Rhodopseudomonas palustris BisA53]
 gb|ABJ04075.1| Alcohol dehydrogenase, zinc-binding domain protein
          [Rhodopseudomonas palustris BisA53]
          Length = 332

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/95 (78%), Positives = 82/95 (86%)

Query: 4  TVNRQILLVEKPTGKLGPEHFRLTKGTIPTPKDGEALVRTRYISLDAANRAWMHGATYRA 63
           VNRQILLVEKPTGKLGPEHF+L  G IP PKDGEAL++ RYISLDAANRAWMHGATYRA
Sbjct: 3  AVNRQILLVEKPTGKLGPEHFKLVDGAIPEPKDGEALLKVRYISLDAANRAWMHGATYRA 62

Query: 64 AVEANTVMAGGSIAEVISSNDPGLKPGDIVFGXAG 98
          AVE+NTVMAGG +AEV+SS  PGL  GD+VFG  G
Sbjct: 63 AVESNTVMAGGGVAEVVSSKAPGLAAGDLVFGDTG 97


>ref|ZP_08629187.1| quinone oxidoreductase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07680.1| quinone oxidoreductase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 332

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/93 (76%), Positives = 79/93 (84%)

Query: 6  NRQILLVEKPTGKLGPEHFRLTKGTIPTPKDGEALVRTRYISLDAANRAWMHGATYRAAV 65
          NRQILLVEKPTGKL P++F++ +  IP PKDGE LVR  YISLDAANRAWM GATYRAAV
Sbjct: 5  NRQILLVEKPTGKLAPQNFKMAEAAIPEPKDGEVLVRVLYISLDAANRAWMQGATYRAAV 64

Query: 66 EANTVMAGGSIAEVISSNDPGLKPGDIVFGXAG 98
          EANTVMAGG+IAEV+ SN PGL PGD+VFG  G
Sbjct: 65 EANTVMAGGAIAEVVKSNAPGLAPGDLVFGDTG 97


>ref|YP_004106526.1| alcohol dehydrogenase zinc-binding domain-containing protein
          [Rhodopseudomonas palustris DX-1]
 gb|ADU41793.1| Alcohol dehydrogenase zinc-binding domain protein
          [Rhodopseudomonas palustris DX-1]
          Length = 333

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/98 (73%), Positives = 80/98 (81%)

Query: 1  MNDTVNRQILLVEKPTGKLGPEHFRLTKGTIPTPKDGEALVRTRYISLDAANRAWMHGAT 60
          M  TVNRQILL+EKP  KLGPEHFRL +  IP PKDGEALV+ RYISLDAANRAWM GAT
Sbjct: 1  MTATVNRQILLIEKPKEKLGPEHFRLAESPIPEPKDGEALVKVRYISLDAANRAWMQGAT 60

Query: 61 YRAAVEANTVMAGGSIAEVISSNDPGLKPGDIVFGXAG 98
          YRAAVE ++VM GGS+AEV+SS  PGL PGD+VF   G
Sbjct: 61 YRAAVETDSVMPGGSVAEVVSSKAPGLSPGDLVFADTG 98


>ref|NP_945828.1| putative oxidoreductase [Rhodopseudomonas palustris CGA009]
 emb|CAE25919.1| putative oxidoreductase [Rhodopseudomonas palustris CGA009]
          Length = 333

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/98 (72%), Positives = 79/98 (80%)

Query: 1  MNDTVNRQILLVEKPTGKLGPEHFRLTKGTIPTPKDGEALVRTRYISLDAANRAWMHGAT 60
          M  TVNRQILL+EKP  KLGPEHFRL +  IP PKDGEALV+ RYISLDAANRAWM GAT
Sbjct: 1  MTATVNRQILLIEKPKEKLGPEHFRLAESPIPEPKDGEALVKVRYISLDAANRAWMQGAT 60

Query: 61 YRAAVEANTVMAGGSIAEVISSNDPGLKPGDIVFGXAG 98
          YRAAVE ++VM GGS+AEV+SS  PGL  GD+VF   G
Sbjct: 61 YRAAVETDSVMPGGSVAEVVSSKAPGLVSGDLVFADTG 98