BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0038.p (227 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770546.1| biopolymer transport protein [Bradyrhizobium ja... 365 2e-99 ref|YP_576797.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamb... 362 3e-98 ref|ZP_01046784.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp... 355 3e-96 ref|ZP_01045759.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp... 353 8e-96 ref|ZP_01046411.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp... 348 2e-94 >ref|NP_770546.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49171.1| biopolymer transport protein [Bradyrhizobium japonicum USDA 110] Length = 326 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 183/224 (81%), Positives = 206/224 (91%), Gaps = 4/224 (1%) Query: 1 MFLNADIIVKAVMLGLAFASLVTWTVFIAKMVELTVAQRKLRGALAKIAESRSLAEAQFA 60 MF++AD+IVKAVM+GLAFASL+TWTV IAK +EL+VA +LR AL KI+E+RSLAEAQ A Sbjct: 106 MFMSADVIVKAVMIGLAFASLMTWTVLIAKSIELSVASGRLRSALKKISEARSLAEAQMA 165 Query: 61 LGAKGSVLSSFIAAAMREGRLSAGISSDSGIKERAASSFAEIVRAEARKIRIGMGLLATI 120 LG K +L SF+AAA+RE R+SAG+SSD+GIKERAASSF+EIVRAEAR+IRIGMG+LATI Sbjct: 166 LGTKEGILPSFLAAALREARMSAGLSSDAGIKERAASSFSEIVRAEARRIRIGMGVLATI 225 Query: 121 GATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN 180 G+TSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN Sbjct: 226 GSTSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN 285 Query: 181 HFSRVTKVYLELVNRASGAAGRLLSRDLDRTHGDVPRNAHARAA 224 HFSRVTK YLELV+RASGAAGRLLSRDLDR+HG V H+RAA Sbjct: 286 HFSRVTKSYLELVSRASGAAGRLLSRDLDRSHGSV----HSRAA 325 >ref|YP_576797.1| MotA/TolQ/ExbB proton channel [Nitrobacter hamburgensis X14] gb|ABE62337.1| outer membrane transport energization protein ExbB [Nitrobacter hamburgensis X14] Length = 337 Score = 362 bits (928), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 186/227 (81%), Positives = 204/227 (89%), Gaps = 2/227 (0%) Query: 1 MFLNADIIVKAVMLGLAFASLVTWTVFIAKMVELTVAQRKLRGALAKIAESRSLAEAQFA 60 MFL ADI+VK VM+GLAFASLVTWT+ IAKM+EL++AQR LR AL I+ESRSLAEAQ A Sbjct: 113 MFLTADILVKFVMIGLAFASLVTWTICIAKMIELSLAQRALRAALTTISESRSLAEAQMA 172 Query: 61 LGAKGSVLSSFIAAAMREGRLSAGISSDSGIKERAASSFAEIVRAEARKIRIGMGLLATI 120 LGAK VL+S +AAAMRE RLSAGISSD+GIKERAAS+FAEIVRAE+R+IR+GMGLLATI Sbjct: 173 LGAKDGVLASLLAAAMREARLSAGISSDAGIKERAASNFAEIVRAESRRIRLGMGLLATI 232 Query: 121 GATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN 180 GATSPFVGLFGTVWGIMNSFIGISK+QTTNLAVVAPGIAEALLATA+GLVAAIPAVIIYN Sbjct: 233 GATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVAAIPAVIIYN 292 Query: 181 HFSRVTKVYLELVNRASGAAGRLLSRDLDRTHGDVPRNAHARAAAAE 227 HF+RVTK Y ELV RASGAAGRLLSRDLDRTH V AR+ AAE Sbjct: 293 HFARVTKGYTELVGRASGAAGRLLSRDLDRTH--VSSIGEARSRAAE 337 >ref|ZP_01046784.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A] gb|EAQ35337.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A] Length = 319 Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 181/224 (80%), Positives = 204/224 (91%) Query: 1 MFLNADIIVKAVMLGLAFASLVTWTVFIAKMVELTVAQRKLRGALAKIAESRSLAEAQFA 60 MF++ADIIVK VM+GLAFASLVTWT+ IAKMVEL++A+RKL AL +I ESRSLAEAQ A Sbjct: 95 MFMSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRKLGAALTQIGESRSLAEAQMA 154 Query: 61 LGAKGSVLSSFIAAAMREGRLSAGISSDSGIKERAASSFAEIVRAEARKIRIGMGLLATI 120 LGAK VL+S +A+AM E RLSAGISSD+GIKERAAS+FAEIVRAE+R+IR+GMGLLATI Sbjct: 155 LGAKDGVLASLLASAMHEARLSAGISSDAGIKERAASNFAEIVRAESRRIRLGMGLLATI 214 Query: 121 GATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN 180 GATSPFVGLFGTVWGIMNSFIGISK+QTTNLAVVAPGIAEALLATA+GLVAAIPAVIIYN Sbjct: 215 GATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVAAIPAVIIYN 274 Query: 181 HFSRVTKVYLELVNRASGAAGRLLSRDLDRTHGDVPRNAHARAA 224 HF+RVTK Y+ELV+RASG+AGRLLSRDLDRTH A +RAA Sbjct: 275 HFARVTKGYIELVSRASGSAGRLLSRDLDRTHVGSIGGARSRAA 318 >ref|ZP_01045759.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A] gb|EAQ36130.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A] Length = 360 Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 177/213 (83%), Positives = 200/213 (93%) Query: 1 MFLNADIIVKAVMLGLAFASLVTWTVFIAKMVELTVAQRKLRGALAKIAESRSLAEAQFA 60 MFL+ADIIVK VM+GLAFASLVTWT+ IAKMVEL++A+R L AL +I+ESRSLAEAQ A Sbjct: 139 MFLSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRNLGTALREISESRSLAEAQMA 198 Query: 61 LGAKGSVLSSFIAAAMREGRLSAGISSDSGIKERAASSFAEIVRAEARKIRIGMGLLATI 120 LGA+ VL+S +A+AM E RLSAGISSD+GIKERAASSFAEIVRAE+R++R+GMGLLATI Sbjct: 199 LGARDGVLASLLASAMHEARLSAGISSDAGIKERAASSFAEIVRAESRRVRLGMGLLATI 258 Query: 121 GATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN 180 GATSPFVGLFGTVWGIMNSFIGISK+QTTNLAVVAPGIAEALLATA+GLVAAIPAVIIYN Sbjct: 259 GATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVAAIPAVIIYN 318 Query: 181 HFSRVTKVYLELVNRASGAAGRLLSRDLDRTHG 213 HF+RVTK Y+ELV+RASG+AGRLLSRDLDRTHG Sbjct: 319 HFARVTKGYIELVSRASGSAGRLLSRDLDRTHG 351 >ref|ZP_01046411.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A] gb|EAQ35725.1| MotA/TolQ/ExbB proton channel [Nitrobacter sp. Nb-311A] Length = 335 Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 176/213 (82%), Positives = 199/213 (93%) Query: 1 MFLNADIIVKAVMLGLAFASLVTWTVFIAKMVELTVAQRKLRGALAKIAESRSLAEAQFA 60 MFL+ADIIVK VM+GLAFASLVTWT+ IAKMVEL++A+R L AL +I+ESRSLAEAQ A Sbjct: 114 MFLSADIIVKLVMIGLAFASLVTWTICIAKMVELSLARRNLGTALREISESRSLAEAQMA 173 Query: 61 LGAKGSVLSSFIAAAMREGRLSAGISSDSGIKERAASSFAEIVRAEARKIRIGMGLLATI 120 LGA+ VL+S +A+AM E RLSAGISSD+GIKERAASSFAEIVRAE+R++R+GMGLLATI Sbjct: 174 LGARDGVLASLLASAMHEARLSAGISSDAGIKERAASSFAEIVRAESRRVRLGMGLLATI 233 Query: 121 GATSPFVGLFGTVWGIMNSFIGISKSQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYN 180 GATSPFVGLFGTVWGIMNSFIGISK+QTTNLAVVAPGIAEALLATA+GLVAAI AVIIYN Sbjct: 234 GATSPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALGLVAAILAVIIYN 293 Query: 181 HFSRVTKVYLELVNRASGAAGRLLSRDLDRTHG 213 HF+RVTK Y+ELV+RASG+AGRLLSRDLDRTHG Sbjct: 294 HFARVTKGYIELVSRASGSAGRLLSRDLDRTHG 326