BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0028.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239549.1| dihydroxy-acid dehydratase [Bradyrhizobium s... 535 e-150 emb|CAL76905.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. O... 532 e-149 ref|YP_001205142.2| dihydroxy-acid dehydratase [Bradyrhizobium s... 531 e-149 ref|NP_770555.1| dihydroxy-acid dehydratase [Bradyrhizobium japo... 527 e-147 ref|ZP_08629176.1| xylonate dehydratase [Bradyrhizobiaceae bacte... 523 e-146 >ref|YP_001239549.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. BTAi1] gb|ABQ35643.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. BTAi1] Length = 607 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 253/292 (86%), Positives = 274/292 (93%) Query: 1 VPLLVNMQPAGFYLGEEYHRAGGVPSVVRELIKHKRIHEGALTVNGRTMGENCKEAPAPD 60 VPLLVNMQPAGFYLGEE+HRAGGVP+V+ EL++HKRIHE +TVNGR+MG+NC+ AP PD Sbjct: 316 VPLLVNMQPAGFYLGEEFHRAGGVPAVIGELMRHKRIHEDVITVNGRSMGDNCRAAPKPD 375 Query: 61 GDVIWGYDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDLNAFEGRAIVF 120 DVIW YDKPLVKDAGF+VLRGNLFDSAIMKTSVISKEFRDRYLSNPKD NAFEGRAIVF Sbjct: 376 NDVIWSYDKPLVKDAGFLVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDPNAFEGRAIVF 435 Query: 121 EGPEDYHNRIEDPALDIDEHCILFVRGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 180 EGPEDYH+RI+DPAL IDEHC+LF+RG GPIGYPGGAEVVNMQPPAALIKRGILSLPCIG Sbjct: 436 EGPEDYHDRIDDPALAIDEHCVLFIRGAGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 495 Query: 181 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANIMISEDELRTRRAEL 240 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANI+IS++E+ R AEL Sbjct: 496 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANILISDEEVAKRHAEL 555 Query: 241 KAKGGFPHPANQTPWQELYRKTVGQHATGACLELATRYHDIAGKVGVARDNH 292 KAKGGFP+PANQTPWQELYR TVGQ ATGAC+ELATRY +IAG VGVAR NH Sbjct: 556 KAKGGFPYPANQTPWQELYRNTVGQQATGACMELATRYQNIAGTVGVARHNH 607 >emb|CAL76905.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. ORS 278] Length = 630 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 250/292 (85%), Positives = 272/292 (93%) Query: 1 VPLLVNMQPAGFYLGEEYHRAGGVPSVVRELIKHKRIHEGALTVNGRTMGENCKEAPAPD 60 VPLLVNMQPAGFYLGEE+HRAGGVP+V+ EL++HKRIHE +T NGR+MG+NC+ AP PD Sbjct: 339 VPLLVNMQPAGFYLGEEFHRAGGVPAVIGELMRHKRIHEDVITANGRSMGDNCRAAPKPD 398 Query: 61 GDVIWGYDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDLNAFEGRAIVF 120 DVIW YDKPLVKDAGF+VLRGNLFDSAIMKTSVISKEFRDRYL+NPKD NAFEGRAIVF Sbjct: 399 NDVIWSYDKPLVKDAGFLVLRGNLFDSAIMKTSVISKEFRDRYLNNPKDPNAFEGRAIVF 458 Query: 121 EGPEDYHNRIEDPALDIDEHCILFVRGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 180 EGPEDYH+RI+DPAL IDEHC+LF+RG GPIGYPGGAEVVNMQPPAALIKRGILSLPCIG Sbjct: 459 EGPEDYHDRIDDPALTIDEHCVLFIRGAGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 518 Query: 181 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANIMISEDELRTRRAEL 240 DGRQSGTSGSPSILNASPEAAADGGLAILR GDKVRIDLNKGSANI+IS++E+ R AEL Sbjct: 519 DGRQSGTSGSPSILNASPEAAADGGLAILRAGDKVRIDLNKGSANILISDEEVANRHAEL 578 Query: 241 KAKGGFPHPANQTPWQELYRKTVGQHATGACLELATRYHDIAGKVGVARDNH 292 KAKGGFPHPANQTPWQELYR TVGQ +TGAC+ELATRY +IAG VGVAR NH Sbjct: 579 KAKGGFPHPANQTPWQELYRNTVGQQSTGACMELATRYQNIAGTVGVARHNH 630 >ref|YP_001205142.2| dihydroxy-acid dehydratase [Bradyrhizobium sp. ORS 278] Length = 607 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 250/292 (85%), Positives = 272/292 (93%) Query: 1 VPLLVNMQPAGFYLGEEYHRAGGVPSVVRELIKHKRIHEGALTVNGRTMGENCKEAPAPD 60 VPLLVNMQPAGFYLGEE+HRAGGVP+V+ EL++HKRIHE +T NGR+MG+NC+ AP PD Sbjct: 316 VPLLVNMQPAGFYLGEEFHRAGGVPAVIGELMRHKRIHEDVITANGRSMGDNCRAAPKPD 375 Query: 61 GDVIWGYDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDLNAFEGRAIVF 120 DVIW YDKPLVKDAGF+VLRGNLFDSAIMKTSVISKEFRDRYL+NPKD NAFEGRAIVF Sbjct: 376 NDVIWSYDKPLVKDAGFLVLRGNLFDSAIMKTSVISKEFRDRYLNNPKDPNAFEGRAIVF 435 Query: 121 EGPEDYHNRIEDPALDIDEHCILFVRGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 180 EGPEDYH+RI+DPAL IDEHC+LF+RG GPIGYPGGAEVVNMQPPAALIKRGILSLPCIG Sbjct: 436 EGPEDYHDRIDDPALTIDEHCVLFIRGAGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 495 Query: 181 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANIMISEDELRTRRAEL 240 DGRQSGTSGSPSILNASPEAAADGGLAILR GDKVRIDLNKGSANI+IS++E+ R AEL Sbjct: 496 DGRQSGTSGSPSILNASPEAAADGGLAILRAGDKVRIDLNKGSANILISDEEVANRHAEL 555 Query: 241 KAKGGFPHPANQTPWQELYRKTVGQHATGACLELATRYHDIAGKVGVARDNH 292 KAKGGFPHPANQTPWQELYR TVGQ +TGAC+ELATRY +IAG VGVAR NH Sbjct: 556 KAKGGFPHPANQTPWQELYRNTVGQQSTGACMELATRYQNIAGTVGVARHNH 607 >ref|NP_770555.1| dihydroxy-acid dehydratase [Bradyrhizobium japonicum USDA 110] dbj|BAC49180.1| dihydroxy-acid dehydratase [Bradyrhizobium japonicum USDA 110] Length = 609 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 249/292 (85%), Positives = 270/292 (92%) Query: 1 VPLLVNMQPAGFYLGEEYHRAGGVPSVVRELIKHKRIHEGALTVNGRTMGENCKEAPAPD 60 VPLLVNMQPAGFYLGEE+HRAGGVP+VVREL+KHKRIHE A+TVNGR +GENC AP PD Sbjct: 318 VPLLVNMQPAGFYLGEEFHRAGGVPAVVRELMKHKRIHEDAVTVNGRGIGENCANAPTPD 377 Query: 61 GDVIWGYDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDLNAFEGRAIVF 120 DVIW YDKPLVKDAGF+VL+GNLFDSAIMKTSVISKEFRDRYLS P DLNAFEGRAIVF Sbjct: 378 NDVIWSYDKPLVKDAGFLVLKGNLFDSAIMKTSVISKEFRDRYLSKPGDLNAFEGRAIVF 437 Query: 121 EGPEDYHNRIEDPALDIDEHCILFVRGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 180 EGPEDYH RI+D +LDIDE C+LF+RGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG Sbjct: 438 EGPEDYHARIDDASLDIDERCVLFIRGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 497 Query: 181 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANIMISEDELRTRRAEL 240 DGRQSGTSGSPSILNASPEAAA+GGLAIL+TGDKVRIDLNKGSANI+IS+DEL+ R AEL Sbjct: 498 DGRQSGTSGSPSILNASPEAAANGGLAILKTGDKVRIDLNKGSANILISDDELKKRHAEL 557 Query: 241 KAKGGFPHPANQTPWQELYRKTVGQHATGACLELATRYHDIAGKVGVARDNH 292 KA GGF HP NQTPWQE+YR TVGQ +TGAC+ELATRY ++AG GVARDNH Sbjct: 558 KANGGFKHPPNQTPWQEIYRSTVGQQSTGACMELATRYQNVAGTFGVARDNH 609 >ref|ZP_08629176.1| xylonate dehydratase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07669.1| xylonate dehydratase [Bradyrhizobiaceae bacterium SG-6C] Length = 606 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 251/292 (85%), Positives = 271/292 (92%) Query: 1 VPLLVNMQPAGFYLGEEYHRAGGVPSVVRELIKHKRIHEGALTVNGRTMGENCKEAPAPD 60 VPLLVNMQPAGFYLGEEYHRAGGVP+VVREL+KHKRIHE ALTVNG+TMGENCK A APD Sbjct: 315 VPLLVNMQPAGFYLGEEYHRAGGVPAVVRELMKHKRIHEDALTVNGKTMGENCKSAAAPD 374 Query: 61 GDVIWGYDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDLNAFEGRAIVF 120 DVI YDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKD +AFEGRAIVF Sbjct: 375 SDVIRTYDKPLVKDAGFIVLRGNLFDSAIMKTSVISKEFRDRYLSNPKDPDAFEGRAIVF 434 Query: 121 EGPEDYHNRIEDPALDIDEHCILFVRGTGPIGYPGGAEVVNMQPPAALIKRGILSLPCIG 180 EGPEDYH+RI+D +L IDEHC+LFVRG GPIGYPGGAEVVNMQPPAALIK+GI SLPCIG Sbjct: 435 EGPEDYHHRIDDESLKIDEHCMLFVRGVGPIGYPGGAEVVNMQPPAALIKKGITSLPCIG 494 Query: 181 DGRQSGTSGSPSILNASPEAAADGGLAILRTGDKVRIDLNKGSANIMISEDELRTRRAEL 240 DGRQSGTSGSPSILNASPEAAA+GGLAILRTGD+VRIDLNKG ANI+IS+ E++ R A+L Sbjct: 495 DGRQSGTSGSPSILNASPEAAANGGLAILRTGDRVRIDLNKGEANILISDAEVKQRHADL 554 Query: 241 KAKGGFPHPANQTPWQELYRKTVGQHATGACLELATRYHDIAGKVGVARDNH 292 AKGGFP+P NQTPWQELYR TVGQ +TGACLELATRY +IAG +GVARDNH Sbjct: 555 MAKGGFPYPKNQTPWQELYRDTVGQQSTGACLELATRYRNIAGTIGVARDNH 606