BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0013.p (378 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205160.1| putative thiolase [Bradyrhizobium sp. ORS 27... 627 e-178 ref|YP_001239565.1| putative thiolase [Bradyrhizobium sp. BTAi1]... 625 e-177 ref|ZP_08630977.1| thiolase [Bradyrhizobiaceae bacterium SG-6C] ... 595 e-168 ref|YP_570439.1| thiolase [Rhodopseudomonas palustris BisB5] >gi... 594 e-168 ref|YP_485722.1| thiolase [Rhodopseudomonas palustris HaA2] >gi|... 593 e-167 >ref|YP_001205160.1| putative thiolase [Bradyrhizobium sp. ORS 278] emb|CAL76925.1| putative thiolase [Bradyrhizobium sp. ORS 278] Length = 378 Score = 627 bits (1617), Expect = e-178, Method: Compositional matrix adjust. Identities = 307/378 (81%), Positives = 341/378 (90%) Query: 1 MSFVTGVGLTSYGKHEGLSSLDLMSKAAELAISDAGLKRSDIDGILCGYSTVSPHIMLAT 60 M+++TG GLTS+G+H+G SSLDLMS AA+LA+ DA L R DIDGILCGYSTVSPHIMLAT Sbjct: 1 MTYITGTGLTSFGRHDGRSSLDLMSVAAQLALDDAELTRRDIDGILCGYSTVSPHIMLAT 60 Query: 61 VFAEHFGIRPAYAHAVQVGGATGLAMTMLAHHLVDAGVAKHVLVVGGENRLTGQSRDASI 120 VFAEHFGI P+YAHAVQVGGATGLAM MLAHHLV+AGV +H+LVV GENRLTGQSRDASI Sbjct: 61 VFAEHFGITPSYAHAVQVGGATGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASI 120 Query: 121 QALAQVGHPDYEVTLGPTIPAYYGLVATRYMHEYGLTQEDLAEFAVLMRKHALTHPGAQF 180 QALAQVG+PDYE+ LGPTIPAYYGLVA+RYMHE+G+T++DLAEFAVLMR+HA HPGAQF Sbjct: 121 QALAQVGNPDYELPLGPTIPAYYGLVASRYMHEHGVTEQDLAEFAVLMRRHAHDHPGAQF 180 Query: 181 HEPITVADVMASKPVAMPLKLLDCCPVSDGGAACVISREPTGERQVRVRGCAQAHTHQHV 240 HE ITVADVMASKPVA PLKLLDCCPVSDGGAA ++SREPT VRVRGCAQAHTHQHV Sbjct: 181 HERITVADVMASKPVAKPLKLLDCCPVSDGGAAIIVSREPTAGTAVRVRGCAQAHTHQHV 240 Query: 241 TAAPALSELGAEISIAKAKEVSGIAIPDVRYAAVYDSFTITLAMLLEDLGLAGRGESAAR 300 TAAPALS LGAEI+I +AK + +AI DVRYAAVYDSFTITL MLLEDLGLAGRGE+AA+ Sbjct: 241 TAAPALSGLGAEIAIRQAKAAASVAISDVRYAAVYDSFTITLCMLLEDLGLAGRGEAAAQ 300 Query: 301 VRAGYFNQDGEMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRAENRQVRDASVALLH 360 VR G+F++DG +PLNTHGGLLSYGHCGVGGAMAHL E HLQMTGRA RQVRDA++ LLH Sbjct: 301 VRDGHFSRDGAVPLNTHGGLLSYGHCGVGGAMAHLNEAHLQMTGRAGARQVRDAALTLLH 360 Query: 361 GDGGVLSSHVSMFLERVR 378 GDGGVLSSHVSMF ER R Sbjct: 361 GDGGVLSSHVSMFWERER 378 >ref|YP_001239565.1| putative thiolase [Bradyrhizobium sp. BTAi1] gb|ABQ35659.1| putative thiolase [Bradyrhizobium sp. BTAi1] Length = 378 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/378 (82%), Positives = 344/378 (91%) Query: 1 MSFVTGVGLTSYGKHEGLSSLDLMSKAAELAISDAGLKRSDIDGILCGYSTVSPHIMLAT 60 M+++TG GLT++GKH+G SSLDLMS AA+LA+ DAGL R DIDGILCGYSTVSPHIMLAT Sbjct: 1 MTYITGTGLTAFGKHDGRSSLDLMSMAAQLALDDAGLTRRDIDGILCGYSTVSPHIMLAT 60 Query: 61 VFAEHFGIRPAYAHAVQVGGATGLAMTMLAHHLVDAGVAKHVLVVGGENRLTGQSRDASI 120 VFAEHFGI P+YAHAVQVGGATGLAM MLAHHLV+AGV +H+LVV GENRLTGQSRDASI Sbjct: 61 VFAEHFGITPSYAHAVQVGGATGLAMVMLAHHLVEAGVVRHMLVVAGENRLTGQSRDASI 120 Query: 121 QALAQVGHPDYEVTLGPTIPAYYGLVATRYMHEYGLTQEDLAEFAVLMRKHALTHPGAQF 180 QALAQVGHP YE+ LGPTIPAYYGLVA+RYMHE+G+T++DLAEFAVLMR HAL HPGAQF Sbjct: 121 QALAQVGHPVYELPLGPTIPAYYGLVASRYMHEHGVTEQDLAEFAVLMRTHALDHPGAQF 180 Query: 181 HEPITVADVMASKPVAMPLKLLDCCPVSDGGAACVISREPTGERQVRVRGCAQAHTHQHV 240 H+PITVADVMASKPVA PLKLLDCCPVSDGGAA ++SREPTG VRVRGCAQAHTHQH+ Sbjct: 181 HDPITVADVMASKPVARPLKLLDCCPVSDGGAATIVSREPTGAAAVRVRGCAQAHTHQHI 240 Query: 241 TAAPALSELGAEISIAKAKEVSGIAIPDVRYAAVYDSFTITLAMLLEDLGLAGRGESAAR 300 TAAPALS LGAEI+I KAK +G+ I DV YAAVYDSFTITL MLLEDLGLAGRGE+AAR Sbjct: 241 TAAPALSNLGAEIAITKAKAAAGVEIVDVDYAAVYDSFTITLCMLLEDLGLAGRGEAAAR 300 Query: 301 VRAGYFNQDGEMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRAENRQVRDASVALLH 360 VRAG+F + G +PLNTHGGLLSYGHCGVGGAMAHL E HLQMTGRA +RQVR+AS++LLH Sbjct: 301 VRAGHFGRAGAVPLNTHGGLLSYGHCGVGGAMAHLNEAHLQMTGRAGHRQVREASLSLLH 360 Query: 361 GDGGVLSSHVSMFLERVR 378 GDGGVLSSHVSMF ERVR Sbjct: 361 GDGGVLSSHVSMFWERVR 378 >ref|ZP_08630977.1| thiolase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06277.1| thiolase [Bradyrhizobiaceae bacterium SG-6C] Length = 378 Score = 595 bits (1533), Expect = e-168, Method: Compositional matrix adjust. Identities = 281/378 (74%), Positives = 335/378 (88%) Query: 1 MSFVTGVGLTSYGKHEGLSSLDLMSKAAELAISDAGLKRSDIDGILCGYSTVSPHIMLAT 60 MSF++GVGLT++GKHEG S+LDLM++AA+ A+SDAGLKRSD+D +L GYST PH+MLAT Sbjct: 1 MSFISGVGLTAFGKHEGRSTLDLMTEAAQGALSDAGLKRSDVDSLLTGYSTTMPHLMLAT 60 Query: 61 VFAEHFGIRPAYAHAVQVGGATGLAMTMLAHHLVDAGVAKHVLVVGGENRLTGQSRDASI 120 VFAEHFGI+P+YAHA+QVGGATGLAM MLAH LV+AGVAK +LVV GENRLTGQ+RD+++ Sbjct: 61 VFAEHFGIQPSYAHAIQVGGATGLAMVMLAHELVEAGVAKTILVVAGENRLTGQARDSAM 120 Query: 121 QALAQVGHPDYEVTLGPTIPAYYGLVATRYMHEYGLTQEDLAEFAVLMRKHALTHPGAQF 180 LAQVGHPDYEV LGPTIPAYYGL+A+RYMH+YGLTQED+AEFA+LMR+HA+ HPGAQF Sbjct: 121 STLAQVGHPDYEVPLGPTIPAYYGLLASRYMHDYGLTQEDMAEFALLMRRHAMQHPGAQF 180 Query: 181 HEPITVADVMASKPVAMPLKLLDCCPVSDGGAACVISREPTGERQVRVRGCAQAHTHQHV 240 HEPITVADVMAS+ ++ PLKLLDCCPVSDGGAA +ISREPT + VR+ GC QAH HQHV Sbjct: 181 HEPITVADVMASREISSPLKLLDCCPVSDGGAAFLISREPTNDLHVRIMGCGQAHLHQHV 240 Query: 241 TAAPALSELGAEISIAKAKEVSGIAIPDVRYAAVYDSFTITLAMLLEDLGLAGRGESAAR 300 TAA +LS++GA +++ +A+E +G+ ++YA +YDSFTITLA+L+E+LGLA RGESAAR Sbjct: 241 TAAKSLSDVGAAVALNRAQEKAGVDAGAIKYAGIYDSFTITLAILIEELGLATRGESAAR 300 Query: 301 VRAGYFNQDGEMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRAENRQVRDASVALLH 360 R G F +G +PLNTHGGLLSYGHCG GGAMAHLVET LQMTGRA RQVRDAS+ALLH Sbjct: 301 ARNGDFGINGTLPLNTHGGLLSYGHCGCGGAMAHLVETQLQMTGRAGQRQVRDASLALLH 360 Query: 361 GDGGVLSSHVSMFLERVR 378 GDGGV+SSHVSMFLERVR Sbjct: 361 GDGGVMSSHVSMFLERVR 378 >ref|YP_570439.1| thiolase [Rhodopseudomonas palustris BisB5] gb|ABE40538.1| thiolase [Rhodopseudomonas palustris BisB5] Length = 404 Score = 594 bits (1531), Expect = e-168, Method: Compositional matrix adjust. Identities = 298/378 (78%), Positives = 338/378 (89%) Query: 1 MSFVTGVGLTSYGKHEGLSSLDLMSKAAELAISDAGLKRSDIDGILCGYSTVSPHIMLAT 60 MS+++G GLT +GK EG ++L LM +AAELA++DAGL RSDIDG+LCGYST PHIMLAT Sbjct: 27 MSYISGTGLTPFGKIEGSTTLSLMREAAELAVADAGLARSDIDGLLCGYSTTMPHIMLAT 86 Query: 61 VFAEHFGIRPAYAHAVQVGGATGLAMTMLAHHLVDAGVAKHVLVVGGENRLTGQSRDASI 120 VFAEHFGIRP+Y HA+QVGGATG+AMTMLAH LV++G AK++LVVGGENRLTGQSRDAS+ Sbjct: 87 VFAEHFGIRPSYCHAIQVGGATGMAMTMLAHQLVESGAAKNILVVGGENRLTGQSRDASV 146 Query: 121 QALAQVGHPDYEVTLGPTIPAYYGLVATRYMHEYGLTQEDLAEFAVLMRKHALTHPGAQF 180 QALAQVGHP YEV LGPTIPAYYGLVA+RYMH++G+T+EDLAEFAVLMR HA THPGAQF Sbjct: 147 QALAQVGHPTYEVPLGPTIPAYYGLVASRYMHDHGVTEEDLAEFAVLMRAHAATHPGAQF 206 Query: 181 HEPITVADVMASKPVAMPLKLLDCCPVSDGGAACVISREPTGERQVRVRGCAQAHTHQHV 240 + I+VA+VMASKP+A PLKLLDCCPVSDGGAA VIS EPT +V+VRGCAQAHTHQHV Sbjct: 207 RDSISVAEVMASKPIASPLKLLDCCPVSDGGAALVISAEPTTAHRVKVRGCAQAHTHQHV 266 Query: 241 TAAPALSELGAEISIAKAKEVSGIAIPDVRYAAVYDSFTITLAMLLEDLGLAGRGESAAR 300 TA PA GAE+++ +AK SG+AI DVRYAAVYDSFTITL MLLEDLGLA RGE+AA+ Sbjct: 267 TAMPAAGPSGAELAVERAKAASGVAIGDVRYAAVYDSFTITLLMLLEDLGLAKRGEAAAQ 326 Query: 301 VRAGYFNQDGEMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRAENRQVRDASVALLH 360 R+G F++ G MPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRA +RQVRDASVALLH Sbjct: 327 ARSGNFSRAGVMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRAGDRQVRDASVALLH 386 Query: 361 GDGGVLSSHVSMFLERVR 378 GDGGVLSSHVSMFLERVR Sbjct: 387 GDGGVLSSHVSMFLERVR 404 >ref|YP_485722.1| thiolase [Rhodopseudomonas palustris HaA2] gb|ABD06811.1| thiolase [Rhodopseudomonas palustris HaA2] Length = 404 Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust. Identities = 296/378 (78%), Positives = 337/378 (89%) Query: 1 MSFVTGVGLTSYGKHEGLSSLDLMSKAAELAISDAGLKRSDIDGILCGYSTVSPHIMLAT 60 MS++TGVGLT +GK +G ++L LM AAE A++DA L RSDIDG+LCGYST PHIMLAT Sbjct: 27 MSYITGVGLTPFGKIDGSTTLSLMRDAAEQALADAELTRSDIDGLLCGYSTTMPHIMLAT 86 Query: 61 VFAEHFGIRPAYAHAVQVGGATGLAMTMLAHHLVDAGVAKHVLVVGGENRLTGQSRDASI 120 VFAEHFGIRPAY HAVQVGGATG+AM MLAH LV++G AK++LVVGGENRL+GQSRDAS+ Sbjct: 87 VFAEHFGIRPAYCHAVQVGGATGMAMAMLAHQLVESGAAKNILVVGGENRLSGQSRDASV 146 Query: 121 QALAQVGHPDYEVTLGPTIPAYYGLVATRYMHEYGLTQEDLAEFAVLMRKHALTHPGAQF 180 QALAQVGHP YEV LGPTIPAYYGLVA+RYMH++G+++EDLA FAVLMR HA HPGAQF Sbjct: 147 QALAQVGHPVYEVPLGPTIPAYYGLVASRYMHQHGVSEEDLAAFAVLMRAHAALHPGAQF 206 Query: 181 HEPITVADVMASKPVAMPLKLLDCCPVSDGGAACVISREPTGERQVRVRGCAQAHTHQHV 240 HEPI++A+VMASKP+A PLKLLDCCPVSDGGAA ++SREPT +++VRGC QAHTHQHV Sbjct: 207 HEPISIAEVMASKPIATPLKLLDCCPVSDGGAALIVSREPTTTHRIKVRGCGQAHTHQHV 266 Query: 241 TAAPALSELGAEISIAKAKEVSGIAIPDVRYAAVYDSFTITLAMLLEDLGLAGRGESAAR 300 TA PA GAE SIA+AK SG+A+ D+RYAAVYDSFTITL MLLEDLGLA RGE+AAR Sbjct: 267 TAMPADGPSGAEQSIARAKAASGVALGDIRYAAVYDSFTITLLMLLEDLGLAPRGEAAAR 326 Query: 301 VRAGYFNQDGEMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRAENRQVRDASVALLH 360 R GYF++DG MPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRA++RQVRDAS+ALLH Sbjct: 327 ARDGYFSRDGAMPLNTHGGLLSYGHCGVGGAMAHLVETHLQMTGRADDRQVRDASLALLH 386 Query: 361 GDGGVLSSHVSMFLERVR 378 GDGGVLSSHVSMFLERVR Sbjct: 387 GDGGVLSSHVSMFLERVR 404