BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0004.p (314 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_781299.1| propionyl-CoA carboxylase [Rhodopseudomonas pal... 516 e-144 ref|YP_532958.1| propionyl-CoA carboxylase [Rhodopseudomonas pal... 509 e-142 ref|NP_948794.1| methylmalonyl-CoA decarboxylase subunit alpha [... 502 e-140 ref|YP_004108264.1| carboxyl transferase [Rhodopseudomonas palus... 501 e-140 ref|YP_001992916.1| Propionyl-CoA carboxylase [Rhodopseudomonas ... 501 e-140 >ref|YP_781299.1| propionyl-CoA carboxylase [Rhodopseudomonas palustris BisA53] gb|ABJ06319.1| Propionyl-CoA carboxylase [Rhodopseudomonas palustris BisA53] Length = 518 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 248/305 (81%), Positives = 276/305 (90%) Query: 1 MGGVDKVKRQRDQGRLTVRERIDKLVDQNSFHEVGAISGIAEYDENNELKQLTPANCVFG 60 MGGVDKVKRQ DQGRLTVRERIDKL+D++SFHEVGA+SGI EYD + EL ++TPANCVFG Sbjct: 20 MGGVDKVKRQHDQGRLTVRERIDKLIDKDSFHEVGAVSGIGEYDAHGELLEVTPANCVFG 79 Query: 61 RARVDGRTVVVVGDDFTVRGGSADASISTKPLMAEEMAHDFRLPIIRMIEGSGGGGSVKT 120 R ++DGR VVVVGDDFTVRGGSADASI KP MAEEMAHDFRLPIIR+IEGSGGGGSVKT Sbjct: 80 RGQIDGRPVVVVGDDFTVRGGSADASIHHKPQMAEEMAHDFRLPIIRVIEGSGGGGSVKT 139 Query: 121 IETRGAANLPGGVGGTRAYWYILANLAQVPVVGLGLGSVAGLGAARLAATHYSVMTKSSA 180 IET+GAANLPGGVGGT +WY AN+AQVPVVGLGLGSVAGLGAARL A+HYSVMTKSSA Sbjct: 140 IETKGAANLPGGVGGTEWFWYTTANMAQVPVVGLGLGSVAGLGAARLVASHYSVMTKSSA 199 Query: 181 MFVAGPPVVKRLGQDLTKQELGGADIQTRAGAIDQAVETEEEAFDYARRFLSYLPSSVYD 240 MFVAGPPVV RLGQ+LTKQELGG +IQTRAG +D AVETEEEAF ARRFLSYLPSSV++ Sbjct: 200 MFVAGPPVVARLGQELTKQELGGWEIQTRAGGVDHAVETEEEAFACARRFLSYLPSSVHE 259 Query: 241 LPPTVPCADDPERAEESLLKAVPRNRKQVYKMRPIIDAVVDKGSFFEVASNFGRPVITGL 300 LPPT+ DDPER+EE+LLKAVPRNR+QVYKMRPII+A+VD GSFFE+ NFGR +I GL Sbjct: 260 LPPTIATDDDPERSEEALLKAVPRNRRQVYKMRPIIEALVDNGSFFEMGQNFGRSIIAGL 319 Query: 301 ARLEG 305 ARL+G Sbjct: 320 ARLQG 324 >ref|YP_532958.1| propionyl-CoA carboxylase [Rhodopseudomonas palustris BisB18] gb|ABD88639.1| Propionyl-CoA carboxylase [Rhodopseudomonas palustris BisB18] Length = 518 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 243/305 (79%), Positives = 273/305 (89%) Query: 1 MGGVDKVKRQRDQGRLTVRERIDKLVDQNSFHEVGAISGIAEYDENNELKQLTPANCVFG 60 MGGVDKVKRQ DQGRLTVRERI +L+D SFHEVGA++G+ +YDE EL +TPANCVFG Sbjct: 20 MGGVDKVKRQHDQGRLTVRERIARLIDPGSFHEVGAVAGVGDYDEQGELLDVTPANCVFG 79 Query: 61 RARVDGRTVVVVGDDFTVRGGSADASISTKPLMAEEMAHDFRLPIIRMIEGSGGGGSVKT 120 R +DGR VVVVGDDFTVRGGSADASI KP MAEEMAHDFRLPIIR+IEGSGGGGSVKT Sbjct: 80 RGSIDGRPVVVVGDDFTVRGGSADASIHHKPQMAEEMAHDFRLPIIRVIEGSGGGGSVKT 139 Query: 121 IETRGAANLPGGVGGTRAYWYILANLAQVPVVGLGLGSVAGLGAARLAATHYSVMTKSSA 180 IET+GAANLPGG+GG++ YWY +AN+AQVPVVGLGLGSVAGLGAARL A+HYS+MTKSSA Sbjct: 140 IETKGAANLPGGIGGSQWYWYTIANMAQVPVVGLGLGSVAGLGAARLVASHYSIMTKSSA 199 Query: 181 MFVAGPPVVKRLGQDLTKQELGGADIQTRAGAIDQAVETEEEAFDYARRFLSYLPSSVYD 240 MFVAGPPVV RLGQ L K +LGG +IQTRAG +D AV+TEEEAF ARRFLSYLPSSV+D Sbjct: 200 MFVAGPPVVARLGQQLDKMQLGGFEIQTRAGGVDHAVDTEEEAFACARRFLSYLPSSVHD 259 Query: 241 LPPTVPCADDPERAEESLLKAVPRNRKQVYKMRPIIDAVVDKGSFFEVASNFGRPVITGL 300 LPPT PC DDP+RAEE+LLKAVPRNR+QVYKMRPII+AVVD GSFFE+++NFGR +I GL Sbjct: 260 LPPTSPCNDDPQRAEEALLKAVPRNRRQVYKMRPIIEAVVDNGSFFEMSANFGRSIIAGL 319 Query: 301 ARLEG 305 ARLEG Sbjct: 320 ARLEG 324 >ref|NP_948794.1| methylmalonyl-CoA decarboxylase subunit alpha [Rhodopseudomonas palustris CGA009] emb|CAE28896.1| possible methylmalonyl-CoA decarboxylase alpha chain [Rhodopseudomonas palustris CGA009] Length = 519 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 250/305 (81%), Positives = 278/305 (91%) Query: 1 MGGVDKVKRQRDQGRLTVRERIDKLVDQNSFHEVGAISGIAEYDENNELKQLTPANCVFG 60 MGG+DKVKRQ DQGRLTVRERID+L D SFHE+GA++G+ EYD N EL LTPANCVFG Sbjct: 20 MGGIDKVKRQHDQGRLTVRERIDRLSDAGSFHEIGAVAGLGEYDANGELINLTPANCVFG 79 Query: 61 RARVDGRTVVVVGDDFTVRGGSADASISTKPLMAEEMAHDFRLPIIRMIEGSGGGGSVKT 120 RA++DGRTVVVVGDDFTVRGGSADASI KP MAEEMAHD+RLPIIR+IEGSGGGGSV+T Sbjct: 80 RAKIDGRTVVVVGDDFTVRGGSADASIHAKPQMAEEMAHDYRLPIIRVIEGSGGGGSVRT 139 Query: 121 IETRGAANLPGGVGGTRAYWYILANLAQVPVVGLGLGSVAGLGAARLAATHYSVMTKSSA 180 IE++GAANLPGGV GTR YWY ANLAQVPVVGLGLGSVAGLGAARLAA+HYS+MT++SA Sbjct: 140 IESKGAANLPGGVDGTRWYWYTTANLAQVPVVGLGLGSVAGLGAARLAASHYSIMTRNSA 199 Query: 181 MFVAGPPVVKRLGQDLTKQELGGADIQTRAGAIDQAVETEEEAFDYARRFLSYLPSSVYD 240 MFVAGPPVV RLGQDLTKQELGGADIQTRAGAID AV+TEEEAF ARRFLSYLPSSV++ Sbjct: 200 MFVAGPPVVARLGQDLTKQELGGADIQTRAGAIDHAVDTEEEAFACARRFLSYLPSSVHE 259 Query: 241 LPPTVPCADDPERAEESLLKAVPRNRKQVYKMRPIIDAVVDKGSFFEVASNFGRPVITGL 300 LPPT+ C DDPER +E LLKAVPRNR+QVYKMRPII++VVD+GSFFE+ S FGR +ITGL Sbjct: 260 LPPTLACDDDPERTDEKLLKAVPRNRRQVYKMRPIIESVVDQGSFFEIGSAFGRSIITGL 319 Query: 301 ARLEG 305 ARLEG Sbjct: 320 ARLEG 324 >ref|YP_004108264.1| carboxyl transferase [Rhodopseudomonas palustris DX-1] gb|ADU43531.1| carboxyl transferase [Rhodopseudomonas palustris DX-1] Length = 519 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 249/305 (81%), Positives = 279/305 (91%) Query: 1 MGGVDKVKRQRDQGRLTVRERIDKLVDQNSFHEVGAISGIAEYDENNELKQLTPANCVFG 60 MGG+DKVKRQ DQGRLTVRERID+L D SFHE+GA++G+ EYD + EL LTPANCVFG Sbjct: 20 MGGIDKVKRQHDQGRLTVRERIDRLSDAGSFHEIGAVAGLGEYDASGELTHLTPANCVFG 79 Query: 61 RARVDGRTVVVVGDDFTVRGGSADASISTKPLMAEEMAHDFRLPIIRMIEGSGGGGSVKT 120 RA++DGRTVVVVGDDFTVRGGSADASI KP MAEEMAHD+RLPIIR+IEGSGGGGSV+T Sbjct: 80 RAKIDGRTVVVVGDDFTVRGGSADASIHAKPQMAEEMAHDYRLPIIRVIEGSGGGGSVRT 139 Query: 121 IETRGAANLPGGVGGTRAYWYILANLAQVPVVGLGLGSVAGLGAARLAATHYSVMTKSSA 180 IE++GAANLPGGV GTR YWY ANLAQVPVVGLGLGSVAGLGAARLAA+HYS+MT++SA Sbjct: 140 IESKGAANLPGGVDGTRWYWYTTANLAQVPVVGLGLGSVAGLGAARLAASHYSIMTRNSA 199 Query: 181 MFVAGPPVVKRLGQDLTKQELGGADIQTRAGAIDQAVETEEEAFDYARRFLSYLPSSVYD 240 MFVAGPPVV RLGQDLTKQELGGADIQTRAGAID AV+TEEEAF ARRFLSYLPSSV++ Sbjct: 200 MFVAGPPVVARLGQDLTKQELGGADIQTRAGAIDHAVDTEEEAFACARRFLSYLPSSVHE 259 Query: 241 LPPTVPCADDPERAEESLLKAVPRNRKQVYKMRPIIDAVVDKGSFFEVASNFGRPVITGL 300 LPPT+ C DDPER++E LLKAVPRNR+QVYKMRPII++VVD+GSFFE+ S FGR +ITGL Sbjct: 260 LPPTLACDDDPERSDEKLLKAVPRNRRQVYKMRPIIESVVDQGSFFEIGSAFGRSIITGL 319 Query: 301 ARLEG 305 ARLEG Sbjct: 320 ARLEG 324 >ref|YP_001992916.1| Propionyl-CoA carboxylase [Rhodopseudomonas palustris TIE-1] gb|ACF02441.1| Propionyl-CoA carboxylase [Rhodopseudomonas palustris TIE-1] Length = 519 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 249/305 (81%), Positives = 278/305 (91%) Query: 1 MGGVDKVKRQRDQGRLTVRERIDKLVDQNSFHEVGAISGIAEYDENNELKQLTPANCVFG 60 MGG+DKVKRQ DQGRLTVRERID+L D SFHE+GA++G+ EYD N EL LTPANCVFG Sbjct: 20 MGGIDKVKRQHDQGRLTVRERIDRLSDAGSFHEIGAVAGLGEYDANGELINLTPANCVFG 79 Query: 61 RARVDGRTVVVVGDDFTVRGGSADASISTKPLMAEEMAHDFRLPIIRMIEGSGGGGSVKT 120 RA++DGRTVVVVGDDFTVRGGSADASI KP MAEEMAHD+RLPIIR+IEGSGGGGSV+T Sbjct: 80 RAKIDGRTVVVVGDDFTVRGGSADASIHAKPQMAEEMAHDYRLPIIRVIEGSGGGGSVRT 139 Query: 121 IETRGAANLPGGVGGTRAYWYILANLAQVPVVGLGLGSVAGLGAARLAATHYSVMTKSSA 180 IE++GAANLPGGV GTR YWY ANLAQVPVVGLGLGSVAGLGAARLAA+HYS+MT++SA Sbjct: 140 IESKGAANLPGGVDGTRWYWYTTANLAQVPVVGLGLGSVAGLGAARLAASHYSIMTRNSA 199 Query: 181 MFVAGPPVVKRLGQDLTKQELGGADIQTRAGAIDQAVETEEEAFDYARRFLSYLPSSVYD 240 MFVAGPPVV RLGQDLTKQELGGADIQTRAGAID AV+TEEEAF ARRFLSYLPSSV++ Sbjct: 200 MFVAGPPVVARLGQDLTKQELGGADIQTRAGAIDHAVDTEEEAFACARRFLSYLPSSVHE 259 Query: 241 LPPTVPCADDPERAEESLLKAVPRNRKQVYKMRPIIDAVVDKGSFFEVASNFGRPVITGL 300 LPPT+ C DDPER +E LLKAVPRNR+QVYKMRPII++VVD+GSFFE+ S FGR +ITGL Sbjct: 260 LPPTLACDDDPERTDEKLLKAVPRNRRQVYKMRPIIESVVDQGSFFEIGSAFGRSIITGL 319 Query: 301 ARLEG 305 ARL+G Sbjct: 320 ARLDG 324