BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0013.p (193 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_531649.1| putative transposase [Rhodopseudomonas palustri... 304 4e-81 ref|YP_004109572.1| transposase IS4 family protein [Rhodopseudom... 298 2e-79 ref|YP_782911.1| putative transposase [Rhodopseudomonas palustri... 293 6e-78 ref|YP_001312572.1| transposase IS4 family protein [Sinorhizobiu... 243 7e-63 gb|AAC72825.1| putative transposase [Sinorhizobium meliloti] 243 8e-63 >ref|YP_531649.1| putative transposase [Rhodopseudomonas palustris BisB18] gb|ABD87330.1| putative transposase [Rhodopseudomonas palustris BisB18] Length = 448 Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 146/193 (75%), Positives = 160/193 (82%) Query: 1 VRSQDQHQRGPKVYALHAPEVECIGKGKARAPYEFGCKVSIATPVTSPKGGQFVLHAKAL 60 V QD QRG KVYALHAPEVECIGKGKAR PYEFGCKVS+ TPVT+PKGGQFVLHAKAL Sbjct: 256 VMQQDHRQRGQKVYALHAPEVECIGKGKARKPYEFGCKVSVITPVTAPKGGQFVLHAKAL 315 Query: 61 HGNPFDGHTLGPVVADMEKFTGVEARRIHVDKGYRGHNHPHRLRVWISGQVRRVTASIRR 120 HGNPFDGHTL PV+AD++ TGV RIHVDKGYRGHN+P+R +VWISGQVRRVT IRR Sbjct: 316 HGNPFDGHTLDPVIADLQTQTGVVVERIHVDKGYRGHNYPNRFKVWISGQVRRVTKIIRR 375 Query: 121 EMKRRAAVEPVIGHVKAEHRMDRNYLKGRVGDRINAVLAAAGYNFGLLLRWLAELLRAII 180 EMKRRAAVEPVIGH+KA+HRM RNYLKGR GDRIN VLAAAG+NF LLLRW LLRA+ Sbjct: 376 EMKRRAAVEPVIGHLKADHRMGRNYLKGRDGDRINPVLAAAGFNFHLLLRWFERLLRALF 435 Query: 181 RAFAETVPAQNIA 193 A + + A Sbjct: 436 AALYRVIGSMQYA 448 >ref|YP_004109572.1| transposase IS4 family protein [Rhodopseudomonas palustris DX-1] gb|ADU44839.1| transposase IS4 family protein [Rhodopseudomonas palustris DX-1] Length = 444 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/172 (80%), Positives = 156/172 (90%) Query: 1 VRSQDQHQRGPKVYALHAPEVECIGKGKARAPYEFGCKVSIATPVTSPKGGQFVLHAKAL 60 V+ QD QRG KVY+LHAPEVECIGKGKAR+PYEFGCKVS+ATPVT+PKGGQFVLHAKAL Sbjct: 252 VKQQDHRQRGQKVYSLHAPEVECIGKGKARSPYEFGCKVSVATPVTAPKGGQFVLHAKAL 311 Query: 61 HGNPFDGHTLGPVVADMEKFTGVEARRIHVDKGYRGHNHPHRLRVWISGQVRRVTASIRR 120 HGNPFDGHTLGP++AD++ TGVE +RIHVDKGYRGH++P R +VWISG+VR VT +IRR Sbjct: 312 HGNPFDGHTLGPIIADLQNLTGVEVQRIHVDKGYRGHSYPDRFKVWISGRVRSVTRTIRR 371 Query: 121 EMKRRAAVEPVIGHVKAEHRMDRNYLKGRVGDRINAVLAAAGYNFGLLLRWL 172 EMKRR AVEPVIGH+KAEHRM RN+LKGR GDRINAVLAAAG+NF LLLRW Sbjct: 372 EMKRRTAVEPVIGHLKAEHRMGRNHLKGRHGDRINAVLAAAGFNFHLLLRWF 423 >ref|YP_782911.1| putative transposase [Rhodopseudomonas palustris BisA53] gb|ABJ07931.1| putative transposase [Rhodopseudomonas palustris BisA53] Length = 444 Score = 293 bits (751), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 138/172 (80%), Positives = 152/172 (88%) Query: 1 VRSQDQHQRGPKVYALHAPEVECIGKGKARAPYEFGCKVSIATPVTSPKGGQFVLHAKAL 60 V QD QRG KVYALHAPEVECIGKGKAR PYEFGCKVS+ TPVT+PKGGQFVLHAKAL Sbjct: 252 VMQQDHRQRGQKVYALHAPEVECIGKGKARKPYEFGCKVSVVTPVTAPKGGQFVLHAKAL 311 Query: 61 HGNPFDGHTLGPVVADMEKFTGVEARRIHVDKGYRGHNHPHRLRVWISGQVRRVTASIRR 120 HGNPFDGHTLG ++AD++ TGVE RIHVDKGYRGH++P+R +VWISGQVRRVT +IRR Sbjct: 312 HGNPFDGHTLGSIIADLQTQTGVEVERIHVDKGYRGHSYPNRFKVWISGQVRRVTKAIRR 371 Query: 121 EMKRRAAVEPVIGHVKAEHRMDRNYLKGRVGDRINAVLAAAGYNFGLLLRWL 172 EMKRRAAVEPVIGH+KAEHRM N+LKGR GDR NAVLAAAG+NF LLLRW Sbjct: 372 EMKRRAAVEPVIGHLKAEHRMGSNHLKGRHGDRANAVLAAAGFNFHLLLRWF 423 >ref|YP_001312572.1| transposase IS4 family protein [Sinorhizobium medicae WSM419] ref|YP_001313861.1| transposase IS4 family protein [Sinorhizobium medicae WSM419] ref|YP_001326416.1| transposase IS4 family protein [Sinorhizobium medicae WSM419] gb|ABR59581.1| transposase IS4 family protein [Sinorhizobium medicae WSM419] gb|ABR62639.1| transposase IS4 family protein [Sinorhizobium medicae WSM419] gb|ABR63928.1| transposase IS4 family protein [Sinorhizobium medicae WSM419] Length = 448 Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 119/178 (66%), Positives = 137/178 (76%), Gaps = 2/178 (1%) Query: 1 VRSQDQHQRGPKVYALHAPEVECIGKGKARAPYEFGCKVSIATPVTSPKGGQFVLHAKAL 60 V Q Q QRG K+Y+LHAPEVECIGKGKA PYEFG KVS+AT + KGGQF LHAKA+ Sbjct: 255 VLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLKRSKGGQFALHAKAM 314 Query: 61 HGNPFDGHTLGPVVADMEKFTGVEARRIHVDKGYRGHNHP--HRLRVWISGQVRRVTASI 118 GNP+DGHTL V+ +MEK G E RI D GYRGHN P HR R++ SGQ RRVT +I Sbjct: 315 PGNPYDGHTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFRIFTSGQKRRVTLAI 374 Query: 119 RREMKRRAAVEPVIGHVKAEHRMDRNYLKGRVGDRINAVLAAAGYNFGLLLRWLAELL 176 +REM+RR+A+EPVIGH+KAEHRM RNYL G+ GD INAVLAAAGYNF LLL WL + Sbjct: 375 KREMRRRSAIEPVIGHLKAEHRMGRNYLAGQHGDAINAVLAAAGYNFSLLLNWLRQFF 432 >gb|AAC72825.1| putative transposase [Sinorhizobium meliloti] Length = 448 Score = 243 bits (621), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 119/178 (66%), Positives = 137/178 (76%), Gaps = 2/178 (1%) Query: 1 VRSQDQHQRGPKVYALHAPEVECIGKGKARAPYEFGCKVSIATPVTSPKGGQFVLHAKAL 60 V Q Q QRG K+Y+LHAPEVECIGKGKA PYEFG KVS+AT + KGGQF LHAKA+ Sbjct: 255 VLEQRQRQRGRKIYSLHAPEVECIGKGKAHRPYEFGVKVSVATTLKRSKGGQFALHAKAM 314 Query: 61 HGNPFDGHTLGPVVADMEKFTGVEARRIHVDKGYRGHNHP--HRLRVWISGQVRRVTASI 118 GNP+DGHTL V+ +MEK G E RI D GYRGHN P HR R++ SGQ RRVT +I Sbjct: 315 PGNPYDGHTLATVIPEMEKTVGNEIARILADAGYRGHNAPASHRFRIFTSGQKRRVTLAI 374 Query: 119 RREMKRRAAVEPVIGHVKAEHRMDRNYLKGRVGDRINAVLAAAGYNFGLLLRWLAELL 176 +REM+RR+A+EPVIGH+KAEHRM RNYL G+ GD INAVLAAAGYNF LLL WL + Sbjct: 375 KREMRRRSAIEPVIGHLKAEHRMGRNYLAGQHGDAINAVLAAAGYNFSLLLNWLRQFF 432