BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0009.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001772649.1| beta-lactamase domain-containing protein [Me...   207   4e-52
ref|YP_002423006.1| beta-lactamase [Methylobacterium chlorometha...   197   4e-49
ref|YP_001641376.1| beta-lactamase domain-containing protein [Me...   197   4e-49
ref|YP_003070354.1| metallo-hydrolase/oxidoreductase [Methylobac...   197   4e-49
ref|ZP_00051396.2| COG1237: Metal-dependent hydrolases of the be...   196   7e-49

>ref|YP_001772649.1| beta-lactamase domain-containing protein [Methylobacterium sp.
           4-46]
 gb|ACA20215.1| beta-lactamase domain protein [Methylobacterium sp. 4-46]
          Length = 372

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 97/118 (82%), Positives = 109/118 (92%)

Query: 1   MDGKIVPDEHIHEHATCFNVRDFGLVVISSCGHVGIVNSVKQAQEVSGIQKVHAIVGGFH 60
           ++GKI+PDEH+HEHATCFN+RD GLVVISSCGHVGIVNSV+QAQEVSG++K+HAIVGGFH
Sbjct: 254 LEGKIIPDEHVHEHATCFNLRDRGLVVISSCGHVGIVNSVRQAQEVSGVEKIHAIVGGFH 313

Query: 61  LGPAPKDYLTEVVAEIRKLDPDVLIPMHCSGLNFVQEATAQMGDKVLVTTTGSRLSFG 118
           LGPAPKDYLT+VVAEI KL PDV+IPMHCSGLNFV EA AQM + VLV TTGSRL FG
Sbjct: 314 LGPAPKDYLTQVVAEIAKLKPDVVIPMHCSGLNFVLEAQAQMPENVLVPTTGSRLRFG 371


>ref|YP_002423006.1| beta-lactamase [Methylobacterium chloromethanicum CM4]
 gb|ACK85078.1| beta-lactamase domain protein [Methylobacterium chloromethanicum
           CM4]
          Length = 372

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 106/117 (90%)

Query: 1   MDGKIVPDEHIHEHATCFNVRDFGLVVISSCGHVGIVNSVKQAQEVSGIQKVHAIVGGFH 60
           + GKI+PDEH+HEHATCFNV+  GLVVISSCGHVGIVNSV+QAQEVSGI++VHAIVGGFH
Sbjct: 254 LQGKIIPDEHVHEHATCFNVKGKGLVVISSCGHVGIVNSVRQAQEVSGIERVHAIVGGFH 313

Query: 61  LGPAPKDYLTEVVAEIRKLDPDVLIPMHCSGLNFVQEATAQMGDKVLVTTTGSRLSF 117
           LGPAPK+YLT+VVAEI+KL PDV++PMHCSGLNF  EA AQM + V+V TTGSRL F
Sbjct: 314 LGPAPKEYLTQVVAEIKKLQPDVVVPMHCSGLNFALEAQAQMPENVIVPTTGSRLVF 370


>ref|YP_001641376.1| beta-lactamase domain-containing protein [Methylobacterium
           extorquens PA1]
 gb|ABY32305.1| beta-lactamase domain protein [Methylobacterium extorquens PA1]
          Length = 372

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 106/117 (90%)

Query: 1   MDGKIVPDEHIHEHATCFNVRDFGLVVISSCGHVGIVNSVKQAQEVSGIQKVHAIVGGFH 60
           + GKI+PDEH+HEHATCFNV+  GLVVISSCGHVGIVNSV+QAQEVSGI++VHAIVGGFH
Sbjct: 254 LQGKIIPDEHVHEHATCFNVKGKGLVVISSCGHVGIVNSVRQAQEVSGIERVHAIVGGFH 313

Query: 61  LGPAPKDYLTEVVAEIRKLDPDVLIPMHCSGLNFVQEATAQMGDKVLVTTTGSRLSF 117
           LGPAPK+YLT+VVAEI+KL PDV++PMHCSGLNF  EA AQM + V+V TTGSRL F
Sbjct: 314 LGPAPKEYLTQVVAEIKKLQPDVVVPMHCSGLNFALEAQAQMPENVIVPTTGSRLVF 370


>ref|YP_003070354.1| metallo-hydrolase/oxidoreductase [Methylobacterium extorquens DM4]
 emb|CAX26540.1| putative metallo-hydrolase/oxidoreductase precursor, putative
           exonuclease precursor (tat pathway signal)
           [Methylobacterium extorquens DM4]
          Length = 372

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 106/117 (90%)

Query: 1   MDGKIVPDEHIHEHATCFNVRDFGLVVISSCGHVGIVNSVKQAQEVSGIQKVHAIVGGFH 60
           + GKI+PDEH+HEHATCFNV+  GLVVISSCGHVGIVNSV+QAQEVSGI++VHAIVGGFH
Sbjct: 254 LQGKIIPDEHVHEHATCFNVKGKGLVVISSCGHVGIVNSVRQAQEVSGIERVHAIVGGFH 313

Query: 61  LGPAPKDYLTEVVAEIRKLDPDVLIPMHCSGLNFVQEATAQMGDKVLVTTTGSRLSF 117
           LGPAPK+YLT+VVAEI+KL PDV++PMHCSGLNF  EA AQM + V+V TTGSRL F
Sbjct: 314 LGPAPKEYLTQVVAEIKKLQPDVVVPMHCSGLNFALEAQAQMPENVIVPTTGSRLVF 370


>ref|ZP_00051396.2| COG1237: Metal-dependent hydrolases of the beta-lactamase
           superfamily II [Magnetospirillum magnetotacticum MS-1]
          Length = 372

 Score =  196 bits (499), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 94/118 (79%), Positives = 105/118 (88%)

Query: 1   MDGKIVPDEHIHEHATCFNVRDFGLVVISSCGHVGIVNSVKQAQEVSGIQKVHAIVGGFH 60
           + GKI+PDEH+HEHATCFNV+  GLVVISSCGHVGIVNSV+QAQ VSGI+KVHAIVGGFH
Sbjct: 254 LQGKIIPDEHVHEHATCFNVKGKGLVVISSCGHVGIVNSVRQAQAVSGIEKVHAIVGGFH 313

Query: 61  LGPAPKDYLTEVVAEIRKLDPDVLIPMHCSGLNFVQEATAQMGDKVLVTTTGSRLSFG 118
           LGPAPK+YLT+VVAEI  L PDV+IPMHCSGLNF  EA AQM D V+V TTGSRL+FG
Sbjct: 314 LGPAPKEYLTQVVAEIGALKPDVVIPMHCSGLNFALEAQAQMPDHVIVPTTGSRLTFG 371