BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0006.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774070.1| transcriptional regulator [Bradyrhizobium japon... 499 e-139 ref|YP_001207863.1| LysR family transcriptional regulator [Brady... 494 e-138 ref|YP_001237898.1| LysR family transcriptional regulator [Brady... 486 e-135 ref|YP_003452888.1| transcriptional regulator [Azospirillum sp. ... 309 4e-82 ref|ZP_02187819.1| transcriptional regulatory protein [alpha pro... 298 7e-79 >ref|NP_774070.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC52695.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 374 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 244/293 (83%), Positives = 263/293 (89%) Query: 1 MRRLLFLNGINAFEAAARTGSFAAAGSELNVSAAAISRMVHLLEERLGVALFERKANRLV 60 +RRLLFLNGI AFEAAARTGSFAAAG ELNVSAAA+SRMVHLLEERLGVALFERKANRLV Sbjct: 70 LRRLLFLNGIKAFEAAARTGSFAAAGVELNVSAAAVSRMVHLLEERLGVALFERKANRLV 129 Query: 61 TTPAGRAYQGGLTPIFDALASLTAQVTASASARVLTVGVGPTFALKWMIPHLAEFRKAEP 120 T AGRAYQ GLTPIFDALASLTAQVTA +S RVLT+GVG TFA++W+IP L+EFR EP Sbjct: 130 LTQAGRAYQSGLTPIFDALASLTAQVTAPSSVRVLTIGVGHTFAMRWLIPRLSEFRNEEP 189 Query: 121 DIEVRITTGGMAVPFADDWSCGIQLGDGQWPGLVAEPLFAADLMPVCTARLANTLKRPAD 180 DIEVR TTGG +VPF +DWSCGI+LG G WPGLVAEPLFA DL PVC RLA +LKRPAD Sbjct: 190 DIEVRFTTGGASVPFGEDWSCGIKLGTGDWPGLVAEPLFAGDLTPVCVPRLAASLKRPAD 249 Query: 181 LKGPSLIRVAHSPDDWPSWLKAAGVPRLTARGPEFQFYGQALQAASDGLGIAMGIRPYID 240 L+GPSLIRVAHS +DWP WLKAA + R+ ARGPEFQFYGQALQAA+DGLGIAMGIRPYID Sbjct: 250 LRGPSLIRVAHSAEDWPIWLKAANLARINARGPEFQFYGQALQAAADGLGIAMGIRPYID 309 Query: 241 DDLAAGRLVAPFALSVPKGMRWYLVYRGFHAEQRDFAAFRRWIIRAAAEPAAR 293 DDLAAGRLVAPF LSVPKGMRWYLVYR F EQRDFAAFRRWI+RAA+EPAAR Sbjct: 310 DDLAAGRLVAPFDLSVPKGMRWYLVYRSFQTEQRDFAAFRRWIMRAASEPAAR 362 >ref|YP_001207863.1| LysR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL79648.1| Putative transcriptional regulatory protein, LysR family [Bradyrhizobium sp. ORS 278] Length = 307 Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust. Identities = 241/293 (82%), Positives = 263/293 (89%) Query: 1 MRRLLFLNGINAFEAAARTGSFAAAGSELNVSAAAISRMVHLLEERLGVALFERKANRLV 60 MRRLLFLNGI AFEAAARTGSFAAAG+ELNVSAAAISRMV+LLE+RLGV LFERKANRL Sbjct: 1 MRRLLFLNGIKAFEAAARTGSFAAAGTELNVSAAAISRMVNLLEQRLGVVLFERKANRLA 60 Query: 61 TTPAGRAYQGGLTPIFDALASLTAQVTASASARVLTVGVGPTFALKWMIPHLAEFRKAEP 120 T AGRAYQ GLTPIFDAL+SLTAQ+ A +S RVLT+GVGPTFA+KW+IP LA+FRK EP Sbjct: 61 LTTAGRAYQSGLTPIFDALSSLTAQIMAPSSMRVLTLGVGPTFAMKWLIPRLADFRKVEP 120 Query: 121 DIEVRITTGGMAVPFADDWSCGIQLGDGQWPGLVAEPLFAADLMPVCTARLANTLKRPAD 180 DIEVRITTGG AVPF DDWSCGI+LGDG WPGLVAEPLFAADL+PVCT RLA TLKRP D Sbjct: 121 DIEVRITTGGAAVPFGDDWSCGIRLGDGAWPGLVAEPLFAADLVPVCTPRLAATLKRPTD 180 Query: 181 LKGPSLIRVAHSPDDWPSWLKAAGVPRLTARGPEFQFYGQALQAASDGLGIAMGIRPYID 240 LKGPSL+RV+H+ +DWP WLKAAG+ R+TARG EFQ+YG ALQAA DGLG+AMGIRPYID Sbjct: 181 LKGPSLLRVSHAAEDWPLWLKAAGITRVTARGTEFQYYGHALQAAIDGLGVAMGIRPYID 240 Query: 241 DDLAAGRLVAPFALSVPKGMRWYLVYRGFHAEQRDFAAFRRWIIRAAAEPAAR 293 DDLAAGRLVAPFAL+VPKG RWYLVYR F A QRDF AFRRWIIRAAA+ A R Sbjct: 241 DDLAAGRLVAPFALTVPKGERWYLVYRSFQAGQRDFTAFRRWIIRAAAQSATR 293 >ref|YP_001237898.1| LysR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ33992.1| Putative transcriptional regulatory protein, LysR family [Bradyrhizobium sp. BTAi1] Length = 307 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 238/300 (79%), Positives = 263/300 (87%) Query: 1 MRRLLFLNGINAFEAAARTGSFAAAGSELNVSAAAISRMVHLLEERLGVALFERKANRLV 60 MRRLLFLNGI AFEAAARTGSFAAAG+ELNVSAAAISRMV+LLE+RLGV LFERKANRL Sbjct: 1 MRRLLFLNGIKAFEAAARTGSFAAAGTELNVSAAAISRMVNLLEQRLGVVLFERKANRLA 60 Query: 61 TTPAGRAYQGGLTPIFDALASLTAQVTASASARVLTVGVGPTFALKWMIPHLAEFRKAEP 120 T AGRAYQ GLTPIFDAL+SLTAQ+ A +S RVLT+GVGPTFA+KW+IP LA+F + EP Sbjct: 61 LTAAGRAYQSGLTPIFDALSSLTAQIMAPSSMRVLTLGVGPTFAMKWLIPRLADFSEEEP 120 Query: 121 DIEVRITTGGMAVPFADDWSCGIQLGDGQWPGLVAEPLFAADLMPVCTARLANTLKRPAD 180 DIEVRITTGG AVPF DDWSCGI+LGDG WPGLVAEPLFAADL+PVCT RLA TLKRP+D Sbjct: 121 DIEVRITTGGAAVPFGDDWSCGIRLGDGAWPGLVAEPLFAADLVPVCTPRLAATLKRPSD 180 Query: 181 LKGPSLIRVAHSPDDWPSWLKAAGVPRLTARGPEFQFYGQALQAASDGLGIAMGIRPYID 240 LKGPSL+RV+H+ +DW WLKAAGV R+TARG EFQ+YG ALQAA DGLG+AMGIRPYID Sbjct: 181 LKGPSLLRVSHAAEDWSLWLKAAGVSRITARGTEFQYYGHALQAAIDGLGVAMGIRPYID 240 Query: 241 DDLAAGRLVAPFALSVPKGMRWYLVYRGFHAEQRDFAAFRRWIIRAAAEPAARRKGTRSA 300 DDLAAGRLVAPFAL+VPKG RWYLVYR F A QRDF AFRRWI++AAA A R + A Sbjct: 241 DDLAAGRLVAPFALTVPKGERWYLVYRSFQAGQRDFTAFRRWIMQAAALSATRNSQRKEA 300 >ref|YP_003452888.1| transcriptional regulator [Azospirillum sp. B510] dbj|BAI76344.1| transcriptional regulator [Azospirillum sp. B510] Length = 291 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 159/283 (56%), Positives = 191/283 (67%) Query: 1 MRRLLFLNGINAFEAAARTGSFAAAGSELNVSAAAISRMVHLLEERLGVALFERKANRLV 60 MRRL LNG+ AFEAAAR GSF AA +ELNVS AAISRMV LLEERLG ALF+R+AN LV Sbjct: 1 MRRLPSLNGLRAFEAAARHGSFTAAAAELNVSQAAISRMVKLLEERLGFALFDRRANALV 60 Query: 61 TTPAGRAYQGGLTPIFDALASLTAQVTASASARVLTVGVGPTFALKWMIPHLAEFRKAEP 120 T GRA Q LT FD +A QV+A + VLTVG+G T A++W+IP L+ F P Sbjct: 61 LTERGRALQPALTDAFDGIARRVEQVSAMRAGPVLTVGMGATVAVRWLIPRLSGFHLDHP 120 Query: 121 DIEVRITTGGMAVPFADDWSCGIQLGDGQWPGLVAEPLFAADLMPVCTARLANTLKRPAD 180 +IEVRI TGG P DDW+C + LG+GQWPG AE LF++ L PVC RLA L+RPAD Sbjct: 121 EIEVRIATGGAGEPMKDDWTCAVLLGNGQWPGYEAERLFSSRLQPVCAPRLAAALRRPAD 180 Query: 181 LKGPSLIRVAHSPDDWPSWLKAAGVPRLTARGPEFQFYGQALQAASDGLGIAMGIRPYID 240 L G +L+RV+H +DWP WL A GV ++G F Y LQAA DG+G+ + Y Sbjct: 181 LAGTTLLRVSHWGEDWPHWLAAVGVAEPASKGLSFSSYAMVLQAAIDGVGVGLAPLLYSQ 240 Query: 241 DDLAAGRLVAPFALSVPKGMRWYLVYRGFHAEQRDFAAFRRWI 283 DD+AAGRL PF L+VP WYLVYR F E FA+FR W+ Sbjct: 241 DDIAAGRLATPFGLAVPMVNSWYLVYRAFRREDAGFASFRDWL 283 >ref|ZP_02187819.1| transcriptional regulatory protein [alpha proteobacterium BAL199] gb|EDP65473.1| transcriptional regulatory protein [alpha proteobacterium BAL199] Length = 253 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 156/223 (69%), Positives = 182/223 (81%) Query: 1 MRRLLFLNGINAFEAAARTGSFAAAGSELNVSAAAISRMVHLLEERLGVALFERKANRLV 60 +RRL FLNG+ AFEAAAR GSFAAA EL+VS AA+SRMV LLE+RLGVALF R ANRL Sbjct: 24 VRRLPFLNGVRAFEAAARAGSFAAAAEELHVSPAAVSRMVRLLEQRLGVALFARSANRLA 83 Query: 61 TTPAGRAYQGGLTPIFDALASLTAQVTASASARVLTVGVGPTFALKWMIPHLAEFRKAEP 120 T AGR YQ GLT IFD+LA LT QVTA + +VLTVGVGPTFA++W+IP LA+FR+ P Sbjct: 84 LTAAGRTYQTGLTQIFDSLALLTDQVTAVGARQVLTVGVGPTFAIRWLIPRLADFRRQAP 143 Query: 121 DIEVRITTGGMAVPFADDWSCGIQLGDGQWPGLVAEPLFAADLMPVCTARLANTLKRPAD 180 +++VRITTGG+A PF DWSCGI LGDG+WP LVAEPLFAADL+PVCT LA TL P D Sbjct: 144 EVDVRITTGGVAAPFDPDWSCGITLGDGRWPDLVAEPLFAADLLPVCTPALARTLSTPGD 203 Query: 181 LKGPSLIRVAHSPDDWPSWLKAAGVPRLTARGPEFQFYGQALQ 223 L+G SL+RV H+PDDW WL+AAG PR TA GP+F++YGQALQ Sbjct: 204 LEGASLLRVGHAPDDWARWLQAAGQPRTTANGPQFEYYGQALQ 246