BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0005.p (354 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003609385.1| FAD-dependent pyridine nucleotide-disulfide ... 288 7e-76 ref|YP_004141815.1| monooxygenase FAD-binding protein [Mesorhizo... 286 5e-75 ref|YP_001351490.1| hypothetical protein PSPA7_6179 [Pseudomonas... 286 5e-75 ref|YP_001523111.1| hypothetical protein AZC_0195 [Azorhizobium ... 285 9e-75 ref|ZP_01446074.1| Flavin-containing monooxygenase FMO [Pelagiba... 283 3e-74 >ref|YP_003609385.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Burkholderia sp. CCGE1002] gb|ADG19874.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Burkholderia sp. CCGE1002] Length = 452 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 175/404 (43%), Positives = 216/404 (53%), Gaps = 62/404 (15%) Query: 5 TIDTLVIGGGQAGLTMSHRLKQRGIAHLVLERGRIAERWRSERWDGLMFQFPNWSVRLPE 64 +IDTLVIG GQAG+ MS L + G+ HLVLER RIAERWR+ RWD L+ P W R P Sbjct: 7 SIDTLVIGAGQAGVAMSEHLSKLGVPHLVLERERIAERWRTCRWDSLVANGPAWHDRFPN 66 Query: 65 FAFPHSDPDGFSGTAAIIAFIEDYAAFXR-------RSAAASRSPGCAAMPAASSPNXDL 117 F DPDGF+G + + E YA + R G A +S Sbjct: 67 MEFEGLDPDGFAGKDQVADYFEAYARKFNAPIRTGVEVTSVERLKGRAGFAVTTSDGAIE 126 Query: 118 LR-------------------DQPGLFQVDAAGYRNPAQLPDGAMLVVGAGASGAQIAEE 158 R L Q+ +A YRNP QLP+GA+LVVGAG+SG QIA+E Sbjct: 127 ARRVVVATGPFQRPVIPPIAPQDAELTQLHSAHYRNPEQLPEGAVLVVGAGSSGVQIADE 186 Query: 159 LMRAGRDVFLSVGRHNRLPRRYRGRDLIWWLAA-----------GRRP-----AGAAAG- 201 L RAGR V+LSVG H+R PR YRGRD WWL GR +GA G Sbjct: 187 LQRAGRKVYLSVGAHDRPPRAYRGRDFCWWLGVLGEWDKEVAVPGREHVTIAVSGAYGGQ 246 Query: 202 --DFRRPWRPHR-------------RFPPFRXAPDLAANIANGDAYYATFLGIVDDFVAA 246 DFRR HR R F DLAAN+ GD Y + L DD++ Sbjct: 247 TIDFRR--LAHRGMTLVGTTKSFANRVASFEQ--DLAANLKRGDEYLMSLLAAADDYIER 302 Query: 247 RRLDHPEDPLARLRLPDPPCLTAPLDAIDLRAARIRSVIWATGYGLDLNWIDIPVLDADG 306 +D P+DP ARL PDP C+T PL +DLR A + ++IWATGY +D +W+ + D G Sbjct: 303 NGVDLPQDPDARLIPPDPECVTHPLPELDLRKAGVSTIIWATGYAVDFSWLHVNAFDDKG 362 Query: 307 APRHRHGVSDVPGLYFLGLQWLSKMKSSFLSGVGDDAAVLADHI 350 P+H+ GVS PG+YFLGL WLS+ SSF+ GV DA +ADHI Sbjct: 363 KPQHQRGVSKEPGVYFLGLPWLSRRASSFIWGVWHDAKHIADHI 406 >ref|YP_004141815.1| monooxygenase FAD-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV11765.1| monooxygenase FAD-binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 424 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 172/405 (42%), Positives = 216/405 (53%), Gaps = 54/405 (13%) Query: 1 VPDETIDTLVIGGGQAGLTMSHRLKQRGIAHLVLERGRIAERWRSERWDGLMFQFPNWSV 60 +P ET+DTLV+GGGQAGL MS L + G+ HLVLER RIAERWRSERWD L+ P W Sbjct: 1 MPVETVDTLVVGGGQAGLAMSEHLSKCGVPHLVLERDRIAERWRSERWDSLVANGPAWHD 60 Query: 61 RLPEFAFPHSDPDGFSGTAAI----IAFIEDYAAFXRRSAAASRSPGCAAMPAASSPNXD 116 R P FP++ PD F G + +A+ + AA R + P D Sbjct: 61 RFPGMEFPNAGPDAFIGKEKVADYFVAYADMIAAPIRCGVEVRKVERLVGRPGFRIETSD 120 Query: 117 ----------------------LLRDQPGLFQVDAAGYRNPAQLPDGAMLVVGAGASGAQ 154 ++ G Q+ ++ YRNP QLP GA+LVVG+G+SG Q Sbjct: 121 GVIEARSVVAATGAFQHPVIPAVIPGDAGPMQIHSSAYRNPGQLPKGAVLVVGSGSSGVQ 180 Query: 155 IAEELMRAGRDVFLSVGRHNRLPRRYRGRDLIWWLAA-----GRRPA------------- 196 IA+EL RAGR V+LSVG H+R PR YR RD WWL + PA Sbjct: 181 IADELQRAGRRVYLSVGPHDRPPRAYRERDFCWWLGVLGKWDAQAPAPGTEHVTIAVSGA 240 Query: 197 -GAAAGDFRR---------PWRPHRRFPPFRXAPDLAANIANGDAYYATFLGIVDDFVAA 246 G DFRR R APDLA NIA GDA Y + L D +VA Sbjct: 241 RGGQTIDFRRLAAQGMTLVGRTESYRHGVMTFAPDLAKNIARGDANYMSVLDEADAYVAR 300 Query: 247 RRLDHPEDPLARLRLPDPPCLTAPLDAIDLRAARIRSVIWATGYGLDLNWIDIPVLDADG 306 LD P +P AR PDP C+T P+ ++L A I S+IWATG+ +D NW+ + V D G Sbjct: 301 NGLDLPPEPEARKIGPDPQCMTDPILELNLSEAGIGSIIWATGFTVDYNWLKVDVFDERG 360 Query: 307 APRHRHGVSDVPGLYFLGLQWLSKMKSSFLSGVGDDAAVLADHIA 351 P+H+ GVS PG+YFLGL W S+ SSF+ GV DA +ADHI+ Sbjct: 361 KPKHQRGVSTEPGIYFLGLPWQSRRGSSFIWGVWHDAQHVADHIS 405 >ref|YP_001351490.1| hypothetical protein PSPA7_6179 [Pseudomonas aeruginosa PA7] gb|ABR86277.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 450 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 176/409 (43%), Positives = 217/409 (53%), Gaps = 69/409 (16%) Query: 4 ETIDTLVIGGGQAGLTMSHRLKQRGIAHLVLERGRIAERWRSERWDGLMFQFPNWSVRLP 63 E DTLV+G GQAG+ MS L + G+ HLVLER RIAE WRS RWD L+ P W R P Sbjct: 18 EKTDTLVVGAGQAGVAMSEHLGRLGVPHLVLERNRIAEAWRSGRWDSLVANGPAWHDRFP 77 Query: 64 EFAFPHSDPDGFSGTAAIIAFIEDYAAFXRRSAAASRS-------------PGCAAMPAA 110 F SDPDGF G + A+ E YA +R AA R+ PG +A Sbjct: 78 GMEF-DSDPDGFPGKDQVAAYFEAYA---KRIAAPIRTGVEVTKVVRNVGRPGFTVETSA 133 Query: 111 SSPNXDLLRDQPGLFQ----------------VDAAGYRNPAQLPDGAMLVVGAGASGAQ 154 + + + G FQ + +A Y NP QLP+GA+LVVGAG+SG Q Sbjct: 134 GTIEANRVVAATGPFQRPVIPPIAPRDERIRQIHSAHYHNPRQLPEGAVLVVGAGSSGVQ 193 Query: 155 IAEELMRAGRDVFLSVGRHNRLPRRYRGRDLIWWLAAGRRPAGAAAGDFRRPWRPHRRFP 214 IA+EL RAGR V+LSVG H+R PR YRGRD WWL G + +P R H Sbjct: 194 IADELQRAGRQVYLSVGAHDRPPRSYRGRDFCWWLGV----LGEWDAEVAKPGREHVTIA 249 Query: 215 ----------PFRX----------------------APDLAANIANGDAYYATFLGIVDD 242 FR PDLA N+A GD Y L D Sbjct: 250 VSGARGGHTVDFRALAQQGVTLVGLTRSFADGVATFQPDLAENLARGDENYLALLDAADA 309 Query: 243 FVAARRLDHPEDPLARLRLPDPPCLTAPLDAIDLRAARIRSVIWATGYGLDLNWIDIPVL 302 +VA LD PE+P AR RLPDP C+T P+ +DL AA + S+IWATGY +D W+ + Sbjct: 310 YVARNGLDLPEEPEARRRLPDPACVTDPILELDLAAAGVGSIIWATGYAVDFGWLQVDAF 369 Query: 303 DADGAPRHRHGVSDVPGLYFLGLQWLSKMKSSFLSGVGDDAAVLADHIA 351 D +G PRH+ GVS PG+YF+GL WLS+ SSF+ GV DA +ADHIA Sbjct: 370 DPNGKPRHQRGVSSEPGVYFIGLPWLSRRGSSFIWGVWHDARHVADHIA 418 >ref|YP_001523111.1| hypothetical protein AZC_0195 [Azorhizobium caulinodans ORS 571] dbj|BAF86193.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 439 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 182/405 (44%), Positives = 225/405 (55%), Gaps = 58/405 (14%) Query: 4 ETIDTLVIGGGQAGLTMSHRLKQRGIAHLVLERGRIAERWRSERWDGLMFQFPNWSVRLP 63 E IDTLVIG GQAGL MS L + G+ HLVLER RIAERWRSERWD L+ P W R P Sbjct: 4 EKIDTLVIGAGQAGLAMSAHLNRAGVPHLVLERARIAERWRSERWDSLVANGPAWHDRFP 63 Query: 64 EFAFPHSD----PDGFSGTAAI----IAFIEDYAAFXR-----------------RSAAA 98 + F D PD F + +AF + AA R R + Sbjct: 64 DLQFSDVDTAVRPDDFPHKETVADYFVAFAQKIAAPVRCGVDVLKVERLEGRTGFRVETS 123 Query: 99 SRSPGCAAMPAASSPNXD-----LLRDQPGLFQVDAAGYRNPAQLPDGAMLVVGAGASGA 153 + + AA+ P L+ + L Q+ + YRNP QLPDGA+LVVGAG+SG Sbjct: 124 LGTIEAQRVVAATGPFQRPSIPALVPEDAPLRQMHSTAYRNPDQLPDGAVLVVGAGSSGV 183 Query: 154 QIAEELMRAGRDVFLSVGRHNRLPRRYRGRDLIWWL-------AAGRRP---------AG 197 QIAEELMRAGR V+LSVG H+R PR YRGRD WWL AA + P +G Sbjct: 184 QIAEELMRAGRTVYLSVGPHDRPPRAYRGRDFCWWLGVLGKWDAAAQEPGKEHVTIAVSG 243 Query: 198 AAAG---DFRRPWRPHR----RFPPFRX-----APDLAANIANGDAYYATFLGIVDDFVA 245 A G DFRR R F+ APDLA N+ NGDA Y L D +VA Sbjct: 244 ARGGHTIDFRRLASEGMVLVGRTESFKDGVLSFAPDLAENLDNGDANYRALLDEADAYVA 303 Query: 246 ARRLDHPEDPLARLRLPDPPCLTAPLDAIDLRAARIRSVIWATGYGLDLNWIDIPVLDAD 305 LD PE+P AR+R+PD C+T PL +DL+AA + ++IWATG+ D +W+ + DA+ Sbjct: 304 RNGLDLPEEPEARIRVPDAACITDPLATLDLKAAGVGTIIWATGFVSDYSWMKVNAFDAN 363 Query: 306 GAPRHRHGVSDVPGLYFLGLQWLSKMKSSFLSGVGDDAAVLADHI 350 G PRH+ GVS G+YFLGL W S+ SSF+ GV DA +AD I Sbjct: 364 GRPRHQRGVSTEAGVYFLGLPWQSRRGSSFIWGVWHDAKYIADQI 408 >ref|ZP_01446074.1| Flavin-containing monooxygenase FMO [Pelagibaca bermudensis HTCC2601] gb|EAU43690.1| Flavin-containing monooxygenase FMO [Roseovarius sp. HTCC2601] Length = 428 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 177/402 (44%), Positives = 218/402 (54%), Gaps = 54/402 (13%) Query: 4 ETIDTLVIGGGQAGLTMSHRLKQRGIAHLVLERGRIAERWRSERWDGLMFQFPNWSVRLP 63 ETIDTLV+GGGQAG+ MS L + GI HLVLER RIAERWRSERWD L+ P W R P Sbjct: 4 ETIDTLVVGGGQAGIAMSEHLGRAGIPHLVLERARIAERWRSERWDSLVANGPAWHDRFP 63 Query: 64 EFAFPHSDPDGFSGTAAIIAFIEDYAAFX------------------RRSAAASRSPG-- 103 FP D + F + + YA RR S G Sbjct: 64 GLDFPGGDGEAFIPKEKVADYFVQYAEQIGAPLRCGVEVTLVRRLEGRRGFRVETSDGPI 123 Query: 104 -CAAMPAASSPNX-----DLLRDQPGLFQVDAAGYRNPAQLPDGAMLVVGAGASGAQIAE 157 + AA+ P D++ + L Q+ + YRNP QLP+GA+LVVGAG+SG QIA+ Sbjct: 124 EARNVVAATGPFQRPVMPDVIAARDSLHQIHSNAYRNPGQLPEGAVLVVGAGSSGVQIAD 183 Query: 158 ELMRAGRDVFLSVGRHNRLPRRYRGRDLIWWLA-------AGRRP---------AGAAAG 201 EL RAGR V+LSVG H+R PRRYRGRD +WWL A + P +GA G Sbjct: 184 ELSRAGRKVYLSVGPHDRPPRRYRGRDFVWWLGVLGKWDLAAQEPGREHVTIAVSGARGG 243 Query: 202 ---DFRRPWRPHRRF---------PPFRXAPDLAANIANGDAYYATFLGIVDDFVAARRL 249 DFRR R A D+A + GD Y L D +VA L Sbjct: 244 ETVDFRRLAAQGITLLGRTLSEAGGTLRFADDVALQVRRGDENYLALLDEADAYVARNGL 303 Query: 250 DHPEDPLARLRLPDPPCLTAPLDAIDLRAARIRSVIWATGYGLDLNWIDIPVLDADGAPR 309 D PE+P AR+ P+P CLT P+ A+DL A I SVIWATGY +D W+++ D G PR Sbjct: 304 DLPEEPEARVFGPEPDCLTNPVTALDLDEAGIASVIWATGYAVDYGWLEVDTFDEKGVPR 363 Query: 310 HRHGVSDVPGLYFLGLQWLSKMKSSFLSGVGDDAAVLADHIA 351 H+ GVS+ PG+YFLGL W S+ SSF+ GV DA +AD IA Sbjct: 364 HQRGVSEEPGIYFLGLPWQSRRGSSFIWGVWHDARHVADQIA 405