BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0041.p (338 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG38610.1|AF319969_1 mannosyl transferase [Bradyrhizobium ja... 615 e-174 ref|YP_001241533.1| lipopolysaccharide core biosynthesis mannosy... 517 e-144 ref|YP_001207114.1| lipopolysaccharide core biosynthesis mannosy... 495 e-138 ref|NP_772570.1| lipopolysaccharide core biosynthesis mannosyltr... 493 e-137 ref|ZP_07475770.1| Lipopolysaccharide core biosynthesis mannosyl... 299 4e-79 >gb|AAG38610.1|AF319969_1 mannosyl transferase [Bradyrhizobium japonicum] Length = 363 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 321/347 (92%), Positives = 325/347 (93%), Gaps = 10/347 (2%) Query: 1 VPIENTPAGELELIVPNLHRRYSGVTATNRMVAPKLAKMFRAAWLGPHRPDGIDAIGFAD 60 VPIENTPAGELELIVPNLHRRYSGVTATNRMVAPKLAKMFRA WLG HRPDGIDAIG AD Sbjct: 16 VPIENTPAGELELIVPNLHRRYSGVTATNRMVAPKLAKMFRAGWLGSHRPDGIDAIGIAD 75 Query: 61 LLHLWRRASPLIWHARRNDEMIVGLALRALGWPLKLIFTSAAQRHHTWLTRWLIRNMDAI 120 LL+LWRRA P+IWHARRNDEMI GL LRALGWPLKLIFTSAAQRHHTWLTRWLIRNMDAI Sbjct: 76 LLYLWRRARPVIWHARRNDEMIAGLVLRALGWPLKLIFTSAAQRHHTWLTRWLIRNMDAI 135 Query: 121 IATSPLSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS 180 IATSPLSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS Sbjct: 136 IATSPLSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS 195 Query: 181 DVFVEAMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDV 240 DVFVEAMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDV Sbjct: 196 DVFVEAMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDV 255 Query: 241 VRWYQRLTIYAFTSRNEGFGLTLIEAMS----------AGPXFVVEDGVTGVLTSPGDAD 290 VRWYQRLTIYAFTSRNEGFGLTLIEAMS FVVEDGVTGVLTSPGDAD Sbjct: 256 VRWYQRLTIYAFTSRNEGFGLTLIEAMSAGAALVAARAGAAEFVVEDGVTGVLTSPGDAD 315 Query: 291 ALVAALEPLMRDPAAAAAIGARARQRVVDKFSLDAEANAIAAVYRAL 337 ALVAALEP+MRDPAAAAA+GARARQRVVDKFSLDAEANAIA YRAL Sbjct: 316 ALVAALEPMMRDPAAAAAMGARARQRVVDKFSLDAEANAIAKAYRAL 362 >ref|YP_001241533.1| lipopolysaccharide core biosynthesis mannosyltransferase [Bradyrhizobium sp. BTAi1] gb|ABQ37627.1| lipopolysaccharide core biosynthesis mannosyltransferase [Bradyrhizobium sp. BTAi1] Length = 348 Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust. Identities = 259/348 (74%), Positives = 293/348 (84%), Gaps = 10/348 (2%) Query: 1 VPIENTPAGELELIVPNLHRRYSGVTATNRMVAPKLAKMFRAAWLGPHRPDGIDAIGFAD 60 +P E A +L++IVPNLHRRYSGVTATNRMVAPKLA+ RAAWLG + PDGI + +D Sbjct: 1 MPAEPFSAADLDVIVPNLHRRYSGVTATNRMVAPKLARRVRAAWLGTYAPDGIARMQASD 60 Query: 61 LLHLWRRASPLIWHARRNDEMIVGLALRALGWPLKLIFTSAAQRHHTWLTRWLIRNMDAI 120 L+ LWRR PLIWHARRN+EMI G+ LRALGWPLKL+FTSAAQRHH+W+TRWLIR MDAI Sbjct: 61 LVMLWRRRRPLIWHARRNNEMIAGVILRALGWPLKLVFTSAAQRHHSWITRWLIRRMDAI 120 Query: 121 IATSPLSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS 180 IATS +SASYLKR+ATVV HGVDTD YAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS Sbjct: 121 IATSDISASYLKREATVVTHGVDTDIYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS 180 Query: 181 DVFVEAMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDV 240 DVFV AMCRLLPRYPDF+AV+VGAV PEQL FA EL+++I AAGL+ RI+ITGEL I +V Sbjct: 181 DVFVAAMCRLLPRYPDFSAVLVGAVTPEQLPFAGELRKQIAAAGLEQRIVITGELDIAEV 240 Query: 241 VRWYQRLTIYAFTSRNEGFGLTLIE----------AMSAGPXFVVEDGVTGVLTSPGDAD 290 RWYQRLTIYAFTSRNEGFGLTLIE A + VVE+GVTGVL PGD + Sbjct: 241 QRWYQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGVLVPPGDVE 300 Query: 291 ALVAALEPLMRDPAAAAAIGARARQRVVDKFSLDAEANAIAAVYRALI 338 ALVAALEPLMRDPAAA A+G RAR RV+++FSL+AEA+ IAAVYR L+ Sbjct: 301 ALVAALEPLMRDPAAARAMGERARTRVIERFSLEAEADKIAAVYRRLV 348 >ref|YP_001207114.1| lipopolysaccharide core biosynthesis mannosyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL78897.1| lipopolysaccharide core biosynthesis mannosyltransferase [Bradyrhizobium sp. ORS 278] Length = 348 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 249/345 (72%), Positives = 283/345 (82%), Gaps = 10/345 (2%) Query: 4 ENTPAGELELIVPNLHRRYSGVTATNRMVAPKLAKMFRAAWLGPHRPDGIDAIGFADLLH 63 E AG+L++IVPNLHRRYSGVTATNRMVAPKLA++ RAAWLG + P+GI + DLL Sbjct: 4 EPFSAGDLDVIVPNLHRRYSGVTATNRMVAPKLARLVRAAWLGSYAPEGIARLRARDLLK 63 Query: 64 LWRRASPLIWHARRNDEMIVGLALRALGWPLKLIFTSAAQRHHTWLTRWLIRNMDAIIAT 123 + R PLIWHARRNDEMIVG+ LRALGWP KL+FTSAAQRHH+W+TR LIR MDAIIAT Sbjct: 64 VRGRRRPLIWHARRNDEMIVGVILRALGWPFKLLFTSAAQRHHSWITRGLIRRMDAIIAT 123 Query: 124 SPLSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGSDVF 183 S +SASYLKR ATV+ HGVDT+ Y PPADRAAAFAESGLPGRYAIGCFGRVRAQKGSD+F Sbjct: 124 SDISASYLKRAATVITHGVDTEVYKPPADRAAAFAESGLPGRYAIGCFGRVRAQKGSDLF 183 Query: 184 VEAMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDVVRW 243 V AMCRLLP+YPDF+AV+VGAV PEQ+ FA EL+++I AAGL+ RI+ITGEL I DV RW Sbjct: 184 VAAMCRLLPKYPDFSAVLVGAVTPEQMPFAAELRKQIAAAGLEQRIVITGELDIADVQRW 243 Query: 244 YQRLTIYAFTSRNEGFGLTLIE----------AMSAGPXFVVEDGVTGVLTSPGDADALV 293 YQRLTIYAFTSRNEGFGLTLIE A + VVE+GVTG L PGD DALV Sbjct: 244 YQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGRLVPPGDVDALV 303 Query: 294 AALEPLMRDPAAAAAIGARARQRVVDKFSLDAEANAIAAVYRALI 338 AALEPLM+DP AA +G +AR RVV+KFSL+AEA IAAVYR L+ Sbjct: 304 AALEPLMQDPEAARVMGEKARTRVVEKFSLEAEAEKIAAVYRGLV 348 >ref|NP_772570.1| lipopolysaccharide core biosynthesis mannosyltransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC51195.1| lipopolysaccharide core biosynthesis mannosyltransferase [Bradyrhizobium japonicum USDA 110] Length = 345 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 252/343 (73%), Positives = 282/343 (82%), Gaps = 10/343 (2%) Query: 6 TPAGELELIVPNLHRRYSGVTATNRMVAPKLAKMFRAAWLGPHRPDGIDAIGFADLLHLW 65 P +L++IVPNLHRRYSGVTATNRMVAP+LA+++RAAW G P+GI + AD L LW Sbjct: 3 NPPDDLQVIVPNLHRRYSGVTATNRMVAPRLARLYRAAWFGSDAPEGIARLSGADFLKLW 62 Query: 66 RRASPLIWHARRNDEMIVGLALRALGWPLKLIFTSAAQRHHTWLTRWLIRNMDAIIATSP 125 RR +PLIWHARRN+EMI G+ LRALGWPLKL+FTSAAQRHH+W+TRWLIR MDAIIATS Sbjct: 63 RRKTPLIWHARRNNEMIAGVVLRALGWPLKLVFTSAAQRHHSWITRWLIRRMDAIIATSD 122 Query: 126 LSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKGSDVFVE 185 +SAS+LK ATV+ HGVDTD YAPP DR AAFAE+ LPGRYAIGCFGRVRAQKG+DVFV+ Sbjct: 123 ISASFLKVKATVIPHGVDTDVYAPPTDRTAAFAEAALPGRYAIGCFGRVRAQKGTDVFVD 182 Query: 186 AMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIEDVVRWYQ 245 AMCRLLPRYPDFTAVIVG V PEQ FANEL+++IEAA LQSRI+ITGELPIE V RWYQ Sbjct: 183 AMCRLLPRYPDFTAVIVGQVTPEQTPFANELRKRIEAANLQSRIVITGELPIEAVQRWYQ 242 Query: 246 RLTIYAFTSRNEGFGLTLIEAMSAGP----------XFVVEDGVTGVLTSPGDADALVAA 295 RLTIYAFTSRNEGFGLTLIEAM+AG VVEDGVTGVL GDADAL AA Sbjct: 243 RLTIYAFTSRNEGFGLTLIEAMAAGSALVAARAGAAELVVEDGVTGVLIPTGDADALAAA 302 Query: 296 LEPLMRDPAAAAAIGARARQRVVDKFSLDAEANAIAAVYRALI 338 LEPLM+D AA A+G R R RV+ KFSLDAEA I VYR L+ Sbjct: 303 LEPLMQDVTAATAMGERGRARVLAKFSLDAEAARIGEVYRPLL 345 >ref|ZP_07475770.1| Lipopolysaccharide core biosynthesis mannosyltransferase lpcC [Brucella sp. BO2] gb|EFM58231.1| Lipopolysaccharide core biosynthesis mannosyltransferase lpcC [Brucella sp. BO2] Length = 354 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 164/348 (47%), Positives = 214/348 (61%), Gaps = 16/348 (4%) Query: 5 NTPAGELELIVPNLHRRYSGVTATNRMVAP-KLAKMFRAAWLGPHRPDGIDAIGFADLLH 63 P E+E++ PN RR SGVT+T + P + A + A +GP PD + +G++ LL Sbjct: 6 QVPVREVEVVAPNFKRRLSGVTSTIVQLIPLQRAMGLKIATMGPGLPDTLPHLGWSALLS 65 Query: 64 LWRRASPL---IWHARRNDEMIVGLALR-ALGWPLKLIFTSAAQRHHTWLTRWLIRNMDA 119 W R IWHARRN EM+ G+ +R L L+L+FTSAAQRHH T+WLIR M+A Sbjct: 66 FWSRPKTRRFRIWHARRNIEMLAGIFMRDVLRMKLRLVFTSAAQRHHKPFTKWLIRRMNA 125 Query: 120 IIATSPLSASYLKRDATVVMHGVDTDRYAPPADRAAAFAESGLPGRYAIGCFGRVRAQKG 179 +IATS S S+L+ V+MHGVD +R+ PP F+ SGLPG+YA+GCFGRVR KG Sbjct: 126 VIATSARSGSFLEVPHQVIMHGVDLERFHPPVAEDDDFSASGLPGKYAVGCFGRVRPSKG 185 Query: 180 SDVFVEAMCRLLPRYPDFTAVIVGAVVPEQLAFANELKRKIEAAGLQSRIIITGELPIED 239 +D+FV+AM LLP+YPD+TA++ G E AF EL+ +I AAGLQ RI+I GE+P D Sbjct: 186 TDLFVDAMITLLPKYPDWTAIVTGRTTAEYQAFEAELRTRIAAAGLQDRILILGEVP--D 243 Query: 240 VVRWYQRLTIYAFTSRNEGFGLTLIEAMSAGPXFVVEDG---------VTGVLTSPGDAD 290 V WY+RLT+Y SRNEGFGLT +EAM++ V D TG GD D Sbjct: 244 VRVWYRRLTLYVAPSRNEGFGLTPLEAMASKTAVVASDAGAYAEMVVKDTGRFVPAGDGD 303 Query: 291 ALVAALEPLMRDPAAAAAIGARARQRVVDKFSLDAEANAIAAVYRALI 338 AL A+EP + DPA G A V + F L EA AI++VY + Sbjct: 304 ALKNAIEPYLADPAMTKRCGENALAHVREAFPLQKEAAAISSVYEQVF 351