BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0039.p (430 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772572.1| ABC transporter [Bradyrhizobium japonicum USDA ... 759 0.0 ref|YP_001241535.1| ABC transporter permease/ATP-binding protein... 696 0.0 ref|YP_001207116.1| ABC transporter permease/ATP-binding protein... 691 0.0 ref|YP_531307.1| ABC transporter-like protein [Rhodopseudomonas ... 621 e-176 ref|YP_576577.1| ABC transporter related [Nitrobacter hamburgens... 621 e-176 >ref|NP_772572.1| ABC transporter [Bradyrhizobium japonicum USDA 110] dbj|BAC51197.1| ABC transporter HlyB/MsbA family [Bradyrhizobium japonicum USDA 110] Length = 600 Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/440 (84%), Positives = 397/440 (90%), Gaps = 23/440 (5%) Query: 1 MAQFPKKITDDPYGAAILIRRLVMEQGITYWRRYLTAFALMAVAAGSTAGATYVLGQVIN 60 MAQFPKKITDDPY AA+LIRRLV EQGI YWRRYLTAFALMA+AAGSTAGATYVLGQVIN Sbjct: 1 MAQFPKKITDDPYTAAVLIRRLVTEQGIVYWRRYLTAFALMALAAGSTAGATYVLGQVIN 60 Query: 61 QAYVDKNIPGIAMFAGITVVLLFIKGVATYGHMVILNKISNAILASNQRQLFAKLMSESI 120 QAYVDKNIPGIAMF+GITV+LLFIKGVATYGHMVIL KISNAILA+NQRQLFAKLM ESI Sbjct: 61 QAYVDKNIPGIAMFSGITVILLFIKGVATYGHMVILTKISNAILATNQRQLFAKLMRESI 120 Query: 121 GFFSQRHSSEFLARLTAGAKSITDVLNMLVNAIGRDFLMLISMVAVMVWQDPLMSFIGLV 180 GFFS+RHSSEFLARLTAGAKSITDVLNMLVNAIGRD LML++M+ VMVWQDPLMSFIGLV Sbjct: 121 GFFSERHSSEFLARLTAGAKSITDVLNMLVNAIGRDLLMLLAMIGVMVWQDPLMSFIGLV 180 Query: 181 AVPPAMLMLRRLVKRIKGLAYNQFTGTADIMETMQESLQGIRTVKAFTLEGTMQQRIDEH 240 AVPPAML+LR+LVKRIKGLA+NQFTGTADIMETMQESLQGIRTVKAFTLE TMQ+RIDE+ Sbjct: 181 AVPPAMLVLRKLVKRIKGLAFNQFTGTADIMETMQESLQGIRTVKAFTLEETMQKRIDEN 240 Query: 241 IATVESNANKMARVANRSNPLMEMLGGFAVAGCLMYGGYSVVALGSTPGQFFTFLTAFLM 300 IA VE NANKMARVANRSNPLMEMLGGFAVAGCL+YGGYSVVAL +TPG FF+F+TAFLM Sbjct: 241 IAIVERNANKMARVANRSNPLMEMLGGFAVAGCLLYGGYSVVALNATPGAFFSFMTAFLM 300 Query: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQTEDDRPALKLSDARI--------- 351 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASE ++DD+PALKLSDARI Sbjct: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEHSDDDKPALKLSDARIELRDVSFSY 360 Query: 352 --------------XPGKVTALVGPSGGGKSTVLALLLRFYETREGDILIDGQPISSVSR 397 PGKVTALVGPSGGGKSTVL LLLRFYE +GDI+IDGQ I +VSR Sbjct: 361 RAGETVLNRMNFTAEPGKVTALVGPSGGGKSTVLGLLLRFYEVTQGDIVIDGQSIGAVSR 420 Query: 398 KSLRQQTAYVGQDVYLFRDT 417 KSLR QTAYVGQDVYLFRDT Sbjct: 421 KSLRAQTAYVGQDVYLFRDT 440 >ref|YP_001241535.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37629.1| Putative ABC transporter (permease and ATP-binding protein) [Bradyrhizobium sp. BTAi1] Length = 601 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/440 (79%), Positives = 389/440 (88%), Gaps = 23/440 (5%) Query: 1 MAQFPKKITDDPYGAAILIRRLVMEQGITYWRRYLTAFALMAVAAGSTAGATYVLGQVIN 60 MA FPKKITDDPYGAAILIRRLVMEQGI YWRRYLTAFALMAV+AG++AGA Y+LGQVIN Sbjct: 1 MADFPKKITDDPYGAAILIRRLVMEQGIVYWRRYLTAFALMAVSAGASAGAAYILGQVIN 60 Query: 61 QAYVDKNIPGIAMFAGITVVLLFIKGVATYGHMVILNKISNAILASNQRQLFAKLMSESI 120 +AYVDK+IPGIAM +G+TV+LLF+KGV+TYG+ VIL+KISNAILA+NQRQLFAKLMSESI Sbjct: 61 KAYVDKSIPGIAMLSGVTVLLLFVKGVSTYGYAVILSKISNAILANNQRQLFAKLMSESI 120 Query: 121 GFFSQRHSSEFLARLTAGAKSITDVLNMLVNAIGRDFLMLISMVAVMVWQDPLMSFIGLV 180 FFS+RHSSEFLARLTAGAKSITDVL ML+NAIGRD L+LISM+AVMV QDP MS +GLV Sbjct: 121 SFFSERHSSEFLARLTAGAKSITDVLTMLINAIGRDLLLLISMIAVMVAQDPWMSLLGLV 180 Query: 181 AVPPAMLMLRRLVKRIKGLAYNQFTGTADIMETMQESLQGIRTVKAFTLEGTMQQRIDEH 240 VPPAML+LR+LVKRIKGLA++QFTG ADI+ETMQESLQGIRTVKAFTLE M+ RI E+ Sbjct: 181 VVPPAMLVLRKLVKRIKGLAHSQFTGNADILETMQESLQGIRTVKAFTLEDAMRARIAEN 240 Query: 241 IATVESNANKMARVANRSNPLMEMLGGFAVAGCLMYGGYSVVALGSTPGQFFTFLTAFLM 300 IA VE NANKMARV+NRSNPLMEMLGGFAVAGCLMYGGY+VVAL +TPGQFF+F+TAFLM Sbjct: 241 IAVVERNANKMARVSNRSNPLMEMLGGFAVAGCLMYGGYAVVALNATPGQFFSFMTAFLM 300 Query: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQTEDDRPALKLSDARI--------- 351 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQ +DD+PALKL+ A+I Sbjct: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQPDDDKPALKLTQAKIELRDISFAY 360 Query: 352 --------------XPGKVTALVGPSGGGKSTVLALLLRFYETREGDILIDGQPISSVSR 397 PGKVTALVGPSGGGKSTVLALLLRFYE GDILIDGQ I+ VSR Sbjct: 361 RDNEPVLNRMSFVAEPGKVTALVGPSGGGKSTVLALLLRFYEATAGDILIDGQSIAQVSR 420 Query: 398 KSLRQQTAYVGQDVYLFRDT 417 +SLR+QTAYVGQDVYLFRD+ Sbjct: 421 RSLREQTAYVGQDVYLFRDS 440 >ref|YP_001207116.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL78899.1| Putative ABC transporter (permease and ATP-binding protein) [Bradyrhizobium sp. ORS 278] Length = 601 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/440 (78%), Positives = 388/440 (88%), Gaps = 23/440 (5%) Query: 1 MAQFPKKITDDPYGAAILIRRLVMEQGITYWRRYLTAFALMAVAAGSTAGATYVLGQVIN 60 MA+FPKKITDDPYGAAIL+RRLV+EQG+ YWRRYLTAFALMAVAAG++A ATYVLGQVIN Sbjct: 1 MAEFPKKITDDPYGAAILVRRLVLEQGLAYWRRYLTAFALMAVAAGASAAATYVLGQVIN 60 Query: 61 QAYVDKNIPGIAMFAGITVVLLFIKGVATYGHMVILNKISNAILASNQRQLFAKLMSESI 120 +AYV+K+IPGI + +G+TV+LLF+KGV TY + VIL+KISNAILA+NQRQLFAKLM+ES+ Sbjct: 61 KAYVEKSIPGIVLLSGVTVLLLFVKGVTTYSYAVILSKISNAILANNQRQLFAKLMNESV 120 Query: 121 GFFSQRHSSEFLARLTAGAKSITDVLNMLVNAIGRDFLMLISMVAVMVWQDPLMSFIGLV 180 GF+S+RHSSEFLARLT+GAKSITD+L+ML+NAIGRD + LISM+AVMV QDP MS +GL+ Sbjct: 121 GFYSERHSSEFLARLTSGAKSITDILSMLINAIGRDLVTLISMIAVMVLQDPWMSLLGLL 180 Query: 181 AVPPAMLMLRRLVKRIKGLAYNQFTGTADIMETMQESLQGIRTVKAFTLEGTMQQRIDEH 240 VPPAML+LR+LVKRIKGLAYNQFTGTADI+ETMQESLQGIRTVKAFTLE TM+ RIDE+ Sbjct: 181 VVPPAMLVLRKLVKRIKGLAYNQFTGTADILETMQESLQGIRTVKAFTLEDTMRARIDEN 240 Query: 241 IATVESNANKMARVANRSNPLMEMLGGFAVAGCLMYGGYSVVALGSTPGQFFTFLTAFLM 300 IA VE NANKMARV+NRSNPLMEMLGGFAVAGCLMY GYSVVAL +TPGQFF+F+ AFLM Sbjct: 241 IAVVERNANKMARVSNRSNPLMEMLGGFAVAGCLMYAGYSVVALNATPGQFFSFMIAFLM 300 Query: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQTEDDRPALKLSDARI--------- 351 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQ +DD+PALKL+ ARI Sbjct: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQPDDDKPALKLTQARIELRDVSFAY 360 Query: 352 --------------XPGKVTALVGPSGGGKSTVLALLLRFYETREGDILIDGQPISSVSR 397 PGKVTALVGPSGGGKSTVLALLLRFYE GDILIDGQ I+ VSR Sbjct: 361 RDNEPVLNRMSFTAEPGKVTALVGPSGGGKSTVLALLLRFYEATAGDILIDGQSIAKVSR 420 Query: 398 KSLRQQTAYVGQDVYLFRDT 417 +SLR+Q AYVGQDVYLFRDT Sbjct: 421 RSLREQVAYVGQDVYLFRDT 440 >ref|YP_531307.1| ABC transporter-like protein [Rhodopseudomonas palustris BisB18] gb|ABD86988.1| ABC transporter related [Rhodopseudomonas palustris BisB18] Length = 600 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 298/440 (67%), Positives = 368/440 (83%), Gaps = 23/440 (5%) Query: 1 MAQFPKKITDDPYGAAILIRRLVMEQGITYWRRYLTAFALMAVAAGSTAGATYVLGQVIN 60 M + P+KITDDPYGA IL+RRLVMEQG YWRRYLTAFA+MAVAAG+TA + Y+LG+VIN Sbjct: 1 MTEPPRKITDDPYGAMILVRRLVMEQGAVYWRRYLTAFAMMAVAAGATALSAYLLGEVIN 60 Query: 61 QAYVDKNIPGIAMFAGITVVLLFIKGVATYGHMVILNKISNAILASNQRQLFAKLMSESI 120 +AYVD+++ GIA+ + +T+V+ +KG ATYG V+L++ISNAILA+NQR+LFAKLMSES+ Sbjct: 61 KAYVDRDVRGIAILSIVTIVIFSLKGAATYGQTVMLSQISNAILANNQRRLFAKLMSESV 120 Query: 121 GFFSQRHSSEFLARLTAGAKSITDVLNMLVNAIGRDFLMLISMVAVMVWQDPLMSFIGLV 180 GFFS RHSSEFLARL+AGA S+T VL++L+NA+GRD L LI++V VM+ QDP M+ G + Sbjct: 121 GFFSDRHSSEFLARLSAGATSVTQVLSLLINAVGRDLLSLIALVTVMLMQDPFMALFGFL 180 Query: 181 AVPPAMLMLRRLVKRIKGLAYNQFTGTADIMETMQESLQGIRTVKAFTLEGTMQQRIDEH 240 PPA+L++R+LV+RIKGLA+NQFTG ADI+ETMQESLQGIRTVKAFTLE TM++RID + Sbjct: 181 IAPPALLVIRKLVRRIKGLAHNQFTGNADILETMQESLQGIRTVKAFTLEQTMRERIDAN 240 Query: 241 IATVESNANKMARVANRSNPLMEMLGGFAVAGCLMYGGYSVVALGSTPGQFFTFLTAFLM 300 IA V++ A+KMA+V+NR++PLME LGG A+A LMYGGY VVA+G+TPGQFF+FLTAFL+ Sbjct: 241 IAAVQATADKMAKVSNRASPLMETLGGVAIAASLMYGGYRVVAMGATPGQFFSFLTAFLL 300 Query: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQTEDDRPALKLSDARI--------- 351 A EPAKRLARLNI+LNS LVGA+MLLE+VDSPASE + D+PAL+L++AR+ Sbjct: 301 AYEPAKRLARLNIELNSSLVGAKMLLEIVDSPASEPDDSDKPALRLTEARVELRDVNFAY 360 Query: 352 --------------XPGKVTALVGPSGGGKSTVLALLLRFYETREGDILIDGQPISSVSR 397 PGKVTALVGPSGGGKSTVL+LLLR YE + GDILIDGQ + SVSR Sbjct: 361 RPNEPVLSHMSFVAEPGKVTALVGPSGGGKSTVLSLLLRLYEYQSGDILIDGQLVQSVSR 420 Query: 398 KSLRQQTAYVGQDVYLFRDT 417 +SLRQQTAYVGQDVYLFRDT Sbjct: 421 RSLRQQTAYVGQDVYLFRDT 440 >ref|YP_576577.1| ABC transporter related [Nitrobacter hamburgensis X14] gb|ABE62117.1| ABC transporter related protein [Nitrobacter hamburgensis X14] Length = 601 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 306/438 (69%), Positives = 358/438 (81%), Gaps = 23/438 (5%) Query: 1 MAQFPKKITDDPYGAAILIRRLVMEQGITYWRRYLTAFALMAVAAGSTAGATYVLGQVIN 60 M + PKKITDDPYGAAILIRRL+ EQG+ YWRRYL AF LMAV+A +TAG+ Y+LG+VIN Sbjct: 1 MTEPPKKITDDPYGAAILIRRLITEQGMAYWRRYLAAFGLMAVSAATTAGSAYLLGEVIN 60 Query: 61 QAYVDKNIPGIAMFAGITVVLLFIKGVATYGHMVILNKISNAILASNQRQLFAKLMSESI 120 QAYV+K++ GIA+ + +TVV+ IKG ATYGH VIL++ISNAILA+NQR+LFAKLMSESI Sbjct: 61 QAYVNKDVRGIAILSLVTVVIFTIKGAATYGHSVILSQISNAILANNQRRLFAKLMSESI 120 Query: 121 GFFSQRHSSEFLARLTAGAKSITDVLNMLVNAIGRDFLMLISMVAVMVWQDPLMSFIGLV 180 GFFS RHSSEFLARLTAGA S+T VL++L+NA+GRD L LI ++ VMV QDP M+ GL+ Sbjct: 121 GFFSARHSSEFLARLTAGASSVTQVLSLLINAVGRDLLSLIGLIIVMVTQDPYMALFGLL 180 Query: 181 AVPPAMLMLRRLVKRIKGLAYNQFTGTADIMETMQESLQGIRTVKAFTLEGTMQQRIDEH 240 PPAML+LR+LVKR+KGLA+NQF+GT DIME MQESLQGIRTVKAFTLE TM +RID Sbjct: 181 VAPPAMLVLRKLVKRVKGLAHNQFSGTTDIMEIMQESLQGIRTVKAFTLERTMGERIDAS 240 Query: 241 IATVESNANKMARVANRSNPLMEMLGGFAVAGCLMYGGYSVVALGSTPGQFFTFLTAFLM 300 IA VE NKMARV+NR++PLME LGGFA+AG LMYGGY VVA+G+TPGQFF+FLTAFL+ Sbjct: 241 IAAVEQTNNKMARVSNRASPLMETLGGFAIAGGLMYGGYRVVAMGATPGQFFSFLTAFLL 300 Query: 301 ATEPAKRLARLNIDLNSQLVGARMLLEVVDSPASEQTEDDRPALKLSDARI--------- 351 A EPAKRLARLNI+LNS L+GAR LLE+VD PASE + D+PALKL+ A + Sbjct: 301 AYEPAKRLARLNIELNSNLIGARKLLEIVDGPASEPDDSDKPALKLTTACVELRDVTFAY 360 Query: 352 --------------XPGKVTALVGPSGGGKSTVLALLLRFYETREGDILIDGQPISSVSR 397 PGK+TALVGPSGGGKSTVLALLLR YE +GDILIDGQ IS VSR Sbjct: 361 RADEPVLNRMSFVAEPGKMTALVGPSGGGKSTVLALLLRLYEVTKGDILIDGQVISGVSR 420 Query: 398 KSLRQQTAYVGQDVYLFR 415 SLR+QTAYVGQDVYLFR Sbjct: 421 TSLRRQTAYVGQDVYLFR 438