BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0021.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769465.1| transcriptional regulator [Bradyrhizobium japon... 357 1e-96 ref|YP_001768264.1| GntR family transcriptional regulator [Methy... 304 6e-81 ref|YP_003693842.1| GntR family transcriptional regulator [Stark... 278 6e-73 ref|NP_103538.1| transcriptional regulator [Mesorhizobium loti M... 261 5e-68 ref|YP_004611708.1| GntR family transcriptional regulator [Mesor... 249 2e-64 >ref|NP_769465.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48090.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 285 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 171/214 (79%), Positives = 185/214 (86%) Query: 15 REEEQAEVIRRLEEDIIFGRFAPGLRLVEDTLMQRYGASRHFVRQALFQLERQGIVLREK 74 R ++ +V+ RLEEDIIFGR APG RL ED LM YG SRHFVRQAL ER+GIV REK Sbjct: 71 RRDDPDDVVARLEEDIIFGRLAPGARLTEDALMSAYGTSRHFVRQALVDAERRGIVRREK 130 Query: 75 NVGATVRFYSAEEVRQIYEVREMLTRQAALMIALPAPQSLIDQLSELQRHYSTKAEAQDM 134 NVGATVRFYSAEEVRQIYEVREMLTRQAALMI LPAPQ LID+L+ LQR Y KA+ QD+ Sbjct: 131 NVGATVRFYSAEEVRQIYEVREMLTRQAALMIPLPAPQGLIDELTTLQRQYCAKADVQDL 190 Query: 135 RGIHETNDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLADSEGLALSRRQHELMIE 194 RGIHE NDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLAD +GLA SRRQHELMIE Sbjct: 191 RGIHEANDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLADRDGLAQSRRQHELMIE 250 Query: 195 LLKGRDGWALAQLCVDHMQYSKADYLVRISNDKK 228 LLKGRD WALAQLCVDHMQ+SK+DYL RIS + + Sbjct: 251 LLKGRDSWALAQLCVDHMQFSKSDYLARISGETE 284 >ref|YP_001768264.1| GntR family transcriptional regulator [Methylobacterium sp. 4-46] gb|ACA15830.1| transcriptional regulator, GntR family [Methylobacterium sp. 4-46] Length = 226 Score = 304 bits (779), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 154/219 (70%), Positives = 172/219 (78%), Gaps = 1/219 (0%) Query: 6 TLPELQAPSREEEQAEVIRRLEEDIIFGRFAPGLRLVEDTLMQRYGASRHFVRQALFQLE 65 L +L AP R +A V RLEEDIIFGR APG RL ED LM RYGASRHFVRQAL +E Sbjct: 4 ALADLLAPPRAGAEA-VAARLEEDIIFGRLAPGARLTEDALMARYGASRHFVRQALVAVE 62 Query: 66 RQGIVLREKNVGATVRFYSAEEVRQIYEVREMLTRQAALMIALPAPQSLIDQLSELQRHY 125 R+GIV RE+NVGATVR Y+AEEVRQIY+VRE LTR+AAL+I LPAP L+ +L LQ Y Sbjct: 63 RRGIVRRERNVGATVRSYAAEEVRQIYDVREFLTREAALLIGLPAPPGLLAELRRLQDAY 122 Query: 126 STKAEAQDMRGIHETNDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLADSEGLALS 185 +AE D+ IH NDAFHLALFSACGN YLVR+LQDYM LTLPMRAKNLAD+EGL LS Sbjct: 123 RREAERGDLLAIHGANDAFHLALFSACGNAYLVRTLQDYMALTLPMRAKNLADAEGLRLS 182 Query: 186 RRQHELMIELLKGRDGWALAQLCVDHMQYSKADYLVRIS 224 QHE MIELL+GRD WA AQLCVDHM+ SK DYL RI+ Sbjct: 183 LSQHETMIELLRGRDRWAFAQLCVDHMRSSKLDYLSRIA 221 >ref|YP_003693842.1| GntR family transcriptional regulator [Starkeya novella DSM 506] gb|ADH89223.1| transcriptional regulator, GntR family [Starkeya novella DSM 506] Length = 236 Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 135/220 (61%), Positives = 168/220 (76%), Gaps = 1/220 (0%) Query: 10 LQAPSREEEQAEVIRRLEEDIIFGRFAPGLRLVEDTLMQRYGASRHFVRQALFQLERQGI 69 + +P + EQA V+R+LE+DIIFGR APG RLVED +++RY SRH+VR+AL LER G+ Sbjct: 6 VSSPEADAEQA-VLRQLEDDIIFGRIAPGTRLVEDVMIERYATSRHYVRRALAVLERDGL 64 Query: 70 VLREKNVGATVRFYSAEEVRQIYEVREMLTRQAALMIALPAPQSLIDQLSELQRHYSTKA 129 V +NVGATV +SAEEVRQIYEVREMLTRQ LMI LPAP SL+ QL+ +Q Y +A Sbjct: 65 VHLARNVGATVCSFSAEEVRQIYEVREMLTRQIILMIPLPAPASLVAQLTAIQADYRREA 124 Query: 130 EAQDMRGIHETNDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLADSEGLALSRRQH 189 A ++R +HE NDAFHLA+F ACGNPYLVR+ +DYM LTLP+RA NLAD EGL S +H Sbjct: 125 AAPNLRRLHEINDAFHLAMFEACGNPYLVRTAKDYMRLTLPVRASNLADPEGLRRSLSEH 184 Query: 190 ELMIELLKGRDGWALAQLCVDHMQYSKADYLVRISNDKKP 229 ++M++LL+G DGWALAQL +DHMQ SK DY+ R P Sbjct: 185 DIMLDLLQGTDGWALAQLNIDHMQGSKNDYIARTKPSVTP 224 >ref|NP_103538.1| transcriptional regulator [Mesorhizobium loti MAFF303099] dbj|BAB49324.1| probable transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 223 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 130/206 (63%), Positives = 154/206 (74%) Query: 18 EQAEVIRRLEEDIIFGRFAPGLRLVEDTLMQRYGASRHFVRQALFQLERQGIVLREKNVG 77 ++A+ + LEEDIIFGR APG RLVED L+ R+ SRH +RQAL+QLER GIV RE+N G Sbjct: 10 KEADTVHALEEDIIFGRLAPGTRLVEDVLLARFPVSRHTIRQALYQLERLGIVTRERNKG 69 Query: 78 ATVRFYSAEEVRQIYEVREMLTRQAALMIALPAPQSLIDQLSELQRHYSTKAEAQDMRGI 137 A VR S EEVRQIYEVREML RQAALMI LP ++LI QL E+ R YS +A +RGI Sbjct: 70 AMVRRLSPEEVRQIYEVREMLQRQAALMIPLPVSEALIAQLEEIHRIYSGHVDAGYLRGI 129 Query: 138 HETNDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLADSEGLALSRRQHELMIELLK 197 HE ND FHL +FSACGN YLV S++ YM L+LP+RA +LAD E L +SR+ H +MIE LK Sbjct: 130 HEANDRFHLTMFSACGNAYLVSSIEHYMRLSLPVRANSLADREKLDVSRQHHAMMIEALK 189 Query: 198 GRDGWALAQLCVDHMQYSKADYLVRI 223 RD W LAQLCVDH+Q SK YL I Sbjct: 190 RRDNWVLAQLCVDHLQPSKVFYLQEI 215 >ref|YP_004611708.1| GntR family transcriptional regulator [Mesorhizobium opportunistum WSM2075] gb|AEH87614.1| transcriptional regulator, GntR family [Mesorhizobium opportunistum WSM2075] Length = 221 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 124/206 (60%), Positives = 151/206 (73%) Query: 18 EQAEVIRRLEEDIIFGRFAPGLRLVEDTLMQRYGASRHFVRQALFQLERQGIVLREKNVG 77 ++A+ + LEEDIIFGR APG RLVED L+ R+ SRH +RQAL+QLE+ GIV RE+N G Sbjct: 10 KEADTVHALEEDIIFGRLAPGERLVEDVLLARFPVSRHTIRQALYQLEKLGIVTRERNKG 69 Query: 78 ATVRFYSAEEVRQIYEVREMLTRQAALMIALPAPQSLIDQLSELQRHYSTKAEAQDMRGI 137 A VR S +EVRQIYEVREML RQAALMI LPA +LI +L E+ Y + +RGI Sbjct: 70 AMVRRLSPDEVRQIYEVREMLQRQAALMIRLPASDALIAELMEIHEIYGGHIDNGYLRGI 129 Query: 138 HETNDAFHLALFSACGNPYLVRSLQDYMNLTLPMRAKNLADSEGLALSRRQHELMIELLK 197 HE ND FHL +FSACGN YLV S++ YM L+LP+RA +LAD E L +SR+ H +MIE +K Sbjct: 130 HEANDRFHLTMFSACGNAYLVSSIEHYMRLSLPVRANSLADREKLDISRKHHWMMIEAMK 189 Query: 198 GRDGWALAQLCVDHMQYSKADYLVRI 223 RD W LAQLCVDH+Q SK YL I Sbjct: 190 RRDNWVLAQLCVDHLQPSKTFYLQEI 215