BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0020.p (546 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769466.1| dihydroxy-acid dehydratase [Bradyrhizobium japo... 891 0.0 ref|YP_001204548.1| dihydroxy-acid dehydratase [Bradyrhizobium s... 879 0.0 ref|YP_001238869.1| dihydroxy-acid dehydratase [Bradyrhizobium s... 876 0.0 ref|NP_947500.1| dihydroxy-acid dehydratase [Rhodopseudomonas pa... 863 0.0 ref|YP_001991437.1| dihydroxy-acid dehydratase [Rhodopseudomonas... 862 0.0 >ref|NP_769466.1| dihydroxy-acid dehydratase [Bradyrhizobium japonicum USDA 110] dbj|BAC48091.1| dihydroxy-acid dehydratase [Bradyrhizobium japonicum USDA 110] Length = 573 Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/470 (91%), Positives = 451/470 (95%) Query: 1 MADGLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDALNRPIVGITNTYSDYNPCHGNVPQI 60 M GLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDAL RPIVGITNTYSDYNPCHGNVPQI Sbjct: 2 MTSGLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDALERPIVGITNTYSDYNPCHGNVPQI 61 Query: 61 IEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 IEA KRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMD+V+VIGG Sbjct: 62 IEAAKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDSVIVIGG 121 Query: 121 CDKTLPAQIMAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGEIDDNEI 180 CDKTLPAQ+MAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGE+DD EI Sbjct: 122 CDKTLPAQVMAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGEMDDAEI 181 Query: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGLVAAE 240 EAVNGRLAPSVGTCMVMGTASTMAC+ EA+GLSLPMSATIPAPHAERFR AEASG VAAE Sbjct: 182 EAVNGRLAPSVGTCMVMGTASTMACMIEAMGLSLPMSATIPAPHAERFRLAEASGRVAAE 241 Query: 241 MAKTRGPKPSEILTPSSFRNAQVVMQAIGGSTNGLIHLTAIANRSPHKIDLEAFDKLGRE 300 MAKT+GPKPSEILTP+SF+NAQVV+QAIGGSTNGLIHLTA+A+RSPH++DLE FD++GRE Sbjct: 242 MAKTKGPKPSEILTPASFKNAQVVLQAIGGSTNGLIHLTAMAHRSPHRLDLEVFDRIGRE 301 Query: 301 VPVLVDLKPSGEHYMEHFHHAGGVPKLMAQLGDLIDLDAKTITGQTLREVVANAEDVPGQ 360 VPVLVDLKPSGEHYMEHFHHAGGVPKL+AQLGDL+DLDAKTITGQTL ++ ANAEDVPGQ Sbjct: 302 VPVLVDLKPSGEHYMEHFHHAGGVPKLLAQLGDLVDLDAKTITGQTLGDIAANAEDVPGQ 361 Query: 361 DAIRSKANPIKSEGAMAILHGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD 420 DAIR + NPIK EG +A+LHGNLAPRGAVIK SAASPKLLQHTGRAVVFESVEDMTLRVD Sbjct: 362 DAIRPRNNPIKKEGGLAVLHGNLAPRGAVIKQSAASPKLLQHTGRAVVFESVEDMTLRVD 421 Query: 421 DPALDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARAGVKDMVRISD 470 DP LDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLAR G KDMVRISD Sbjct: 422 DPDLDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARGGTKDMVRISD 471 >ref|YP_001204548.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. ORS 278] emb|CAL76311.1| putative dihydroxy-acid dehydratase [Bradyrhizobium sp. ORS 278] Length = 572 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/470 (89%), Positives = 451/470 (95%) Query: 1 MADGLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDALNRPIVGITNTYSDYNPCHGNVPQI 60 M DGLRKGLT+YGDAGFSLFLRKAFIKA GYSDDAL+RPIVGITNTYSDYNPCHGNVPQI Sbjct: 1 MTDGLRKGLTAYGDAGFSLFLRKAFIKAAGYSDDALDRPIVGITNTYSDYNPCHGNVPQI 60 Query: 61 IEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 +EAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAM+TEEMIRAQPMDAVVVIGG Sbjct: 61 LEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMETEEMIRAQPMDAVVVIGG 120 Query: 121 CDKTLPAQIMAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGEIDDNEI 180 CDKTLPAQIMAA+SADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLW KYRAGE+DD+EI Sbjct: 121 CDKTLPAQIMAAVSADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWAKYRAGEMDDSEI 180 Query: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGLVAAE 240 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASG VAAE Sbjct: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGRVAAE 240 Query: 241 MAKTRGPKPSEILTPSSFRNAQVVMQAIGGSTNGLIHLTAIANRSPHKIDLEAFDKLGRE 300 MAK +GPKPSE+LTP++F+NAQVV+QAIGGSTNGL+HLTAIA R+PH IDL+AFD +GRE Sbjct: 241 MAKAKGPKPSELLTPAAFKNAQVVLQAIGGSTNGLVHLTAIAGRTPHTIDLDAFDHIGRE 300 Query: 301 VPVLVDLKPSGEHYMEHFHHAGGVPKLMAQLGDLIDLDAKTITGQTLREVVANAEDVPGQ 360 VPVLVDLKPSG+HYMEHFHHAGGVPKLM QLGDLIDLD ++ITGQ+LR++VA AE+VPGQ Sbjct: 301 VPVLVDLKPSGDHYMEHFHHAGGVPKLMKQLGDLIDLDCRSITGQSLRDIVAAAEEVPGQ 360 Query: 361 DAIRSKANPIKSEGAMAILHGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD 420 D IRS+A+ IK EG +A+L GNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD Sbjct: 361 DVIRSRADAIKPEGGLAVLRGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD 420 Query: 421 DPALDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARAGVKDMVRISD 470 DP LDV+ADDVLVLRNAGPKGAPGMPEAGYLPIPKKLAR G KDMVRISD Sbjct: 421 DPGLDVSADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARGGTKDMVRISD 470 >ref|YP_001238869.1| dihydroxy-acid dehydratase [Bradyrhizobium sp. BTAi1] gb|ABQ34963.1| dihydroxyacid dehydratase [Bradyrhizobium sp. BTAi1] Length = 568 Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/470 (89%), Positives = 450/470 (95%) Query: 1 MADGLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDALNRPIVGITNTYSDYNPCHGNVPQI 60 M DGLRKGLT+YGDAGFSLFLRKAFIKA GYSDDAL+RPIVGITNTYSDYNPCHGNVPQI Sbjct: 1 MTDGLRKGLTAYGDAGFSLFLRKAFIKAAGYSDDALDRPIVGITNTYSDYNPCHGNVPQI 60 Query: 61 IEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 +EAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAM+TEEMIRAQPMDAVVVIGG Sbjct: 61 LEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMETEEMIRAQPMDAVVVIGG 120 Query: 121 CDKTLPAQIMAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGEIDDNEI 180 CDKTLPAQIMAA+SADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLW KYRAGE+DD+EI Sbjct: 121 CDKTLPAQIMAAVSADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWAKYRAGEMDDSEI 180 Query: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGLVAAE 240 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASG VAAE Sbjct: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGRVAAE 240 Query: 241 MAKTRGPKPSEILTPSSFRNAQVVMQAIGGSTNGLIHLTAIANRSPHKIDLEAFDKLGRE 300 +AK +GPKPSE+LTP++F+NAQVV+QAIGGSTNGL+HLTAIA R+PHKIDL+AFD++G E Sbjct: 241 LAKAKGPKPSELLTPAAFKNAQVVLQAIGGSTNGLVHLTAIAGRTPHKIDLDAFDRIGHE 300 Query: 301 VPVLVDLKPSGEHYMEHFHHAGGVPKLMAQLGDLIDLDAKTITGQTLREVVANAEDVPGQ 360 VPVLVDLKPSGEHYMEHFHHAGGVPKLM QLGDLIDLD ++ITGQ+LRE+VA AEDVPGQ Sbjct: 301 VPVLVDLKPSGEHYMEHFHHAGGVPKLMKQLGDLIDLDCRSITGQSLREIVAAAEDVPGQ 360 Query: 361 DAIRSKANPIKSEGAMAILHGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD 420 D IR++ + IK EG +A+L GNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMT RVD Sbjct: 361 DVIRARDDAIKPEGGLAVLRGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTRRVD 420 Query: 421 DPALDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARAGVKDMVRISD 470 DP LDV+ADDVLVLRNAGPKGAPGMPEAGYLPIPKKLAR G KDMVRISD Sbjct: 421 DPDLDVSADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARGGTKDMVRISD 470 >ref|NP_947500.1| dihydroxy-acid dehydratase [Rhodopseudomonas palustris CGA009] emb|CAE27596.1| dihydroxy-acid dehydratase [Rhodopseudomonas palustris CGA009] Length = 568 Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/470 (88%), Positives = 444/470 (94%) Query: 1 MADGLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDALNRPIVGITNTYSDYNPCHGNVPQI 60 MADGLRKGLT+YGD+GFSLFLRKAFIKAMGYSDDAL+RPIVGITNT+SDYNPCHGN PQI Sbjct: 1 MADGLRKGLTAYGDSGFSLFLRKAFIKAMGYSDDALDRPIVGITNTHSDYNPCHGNAPQI 60 Query: 61 IEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 IEAVKRGVML+GAMP VFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG Sbjct: 61 IEAVKRGVMLAGAMPMVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 Query: 121 CDKTLPAQIMAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGEIDDNEI 180 CDKTLPAQ+MAA+SADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLW KYRAGEIDD EI Sbjct: 121 CDKTLPAQVMAAVSADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWAKYRAGEIDDAEI 180 Query: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGLVAAE 240 EAVNGRLAPSVGTCMVMGTASTMAC+ EA+GLSLPMSATIPAPHAERFRSAEASG VAA Sbjct: 181 EAVNGRLAPSVGTCMVMGTASTMACMIEAMGLSLPMSATIPAPHAERFRSAEASGRVAAA 240 Query: 241 MAKTRGPKPSEILTPSSFRNAQVVMQAIGGSTNGLIHLTAIANRSPHKIDLEAFDKLGRE 300 MAK +GP+PSEILTP++FRNAQVV+QAIGGSTNGLIHLTAIA R PH+IDL+ FD +GR+ Sbjct: 241 MAKAKGPRPSEILTPAAFRNAQVVLQAIGGSTNGLIHLTAIAGRVPHRIDLDDFDAIGRK 300 Query: 301 VPVLVDLKPSGEHYMEHFHHAGGVPKLMAQLGDLIDLDAKTITGQTLREVVANAEDVPGQ 360 VPVLVDLKPSG HYMEHFHHAGGVPKLMAQLGDLI+LDA T+TG TLREVVA AEDVPGQ Sbjct: 301 VPVLVDLKPSGAHYMEHFHHAGGVPKLMAQLGDLIELDASTVTGATLREVVAQAEDVPGQ 360 Query: 361 DAIRSKANPIKSEGAMAILHGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD 420 D IRS+ NPI+ EG +A+LHGNLAPRGA+IKH+AASP LLQHTGRAVVFE++EDM R+D Sbjct: 361 DVIRSRDNPIRCEGGLAVLHGNLAPRGALIKHAAASPGLLQHTGRAVVFETLEDMARRID 420 Query: 421 DPALDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARAGVKDMVRISD 470 DP LDV ADDVLVLRNAGPKGAPGMPEAGYLPIP KLARAGVKDMVRISD Sbjct: 421 DPDLDVAADDVLVLRNAGPKGAPGMPEAGYLPIPLKLARAGVKDMVRISD 470 >ref|YP_001991437.1| dihydroxy-acid dehydratase [Rhodopseudomonas palustris TIE-1] gb|ACF00962.1| Dihydroxy-acid dehydratase [Rhodopseudomonas palustris TIE-1] Length = 568 Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/470 (88%), Positives = 443/470 (94%) Query: 1 MADGLRKGLTSYGDAGFSLFLRKAFIKAMGYSDDALNRPIVGITNTYSDYNPCHGNVPQI 60 MADGLRKGLT+YGD+GFSLFLRKAFIKAMGYSDDAL+RPIVGITNT+SDYNPCHGN PQI Sbjct: 1 MADGLRKGLTAYGDSGFSLFLRKAFIKAMGYSDDALDRPIVGITNTHSDYNPCHGNAPQI 60 Query: 61 IEAVKRGVMLSGAMPFVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 IEAVKRGVML+GAMP VFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG Sbjct: 61 IEAVKRGVMLAGAMPMVFPTISIAESFAHPTSMYLRNLMAMDTEEMIRAQPMDAVVVIGG 120 Query: 121 CDKTLPAQIMAAISADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWGKYRAGEIDDNEI 180 CDKTLPAQ+MAA+SADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLW KYRAGEIDD EI Sbjct: 121 CDKTLPAQVMAAVSADLPTVVIPVGPMVVGHHKGEVLGACTDCRRLWAKYRAGEIDDVEI 180 Query: 181 EAVNGRLAPSVGTCMVMGTASTMACITEALGLSLPMSATIPAPHAERFRSAEASGLVAAE 240 EAVNGRLAPSVGTCMVMGTASTMAC+ EA+GLSLPMSATIPAPHAERFRSAEASG VAA Sbjct: 181 EAVNGRLAPSVGTCMVMGTASTMACMIEAMGLSLPMSATIPAPHAERFRSAEASGRVAAA 240 Query: 241 MAKTRGPKPSEILTPSSFRNAQVVMQAIGGSTNGLIHLTAIANRSPHKIDLEAFDKLGRE 300 MAK +GP+PSEILTP++FRNAQVV+QAIGGSTNGLIHLTAIA R PH+IDL+ FD +GR+ Sbjct: 241 MAKAKGPRPSEILTPAAFRNAQVVLQAIGGSTNGLIHLTAIAGRVPHRIDLDEFDAIGRK 300 Query: 301 VPVLVDLKPSGEHYMEHFHHAGGVPKLMAQLGDLIDLDAKTITGQTLREVVANAEDVPGQ 360 VPVLVDLKPSG HYMEHFHHAGGVPKLMAQLGDLI+LDA T+TG TLREVVA AEDVPGQ Sbjct: 301 VPVLVDLKPSGAHYMEHFHHAGGVPKLMAQLGDLIELDASTVTGATLREVVAQAEDVPGQ 360 Query: 361 DAIRSKANPIKSEGAMAILHGNLAPRGAVIKHSAASPKLLQHTGRAVVFESVEDMTLRVD 420 D IRS NPI+ EG +A+LHGNLAPRGA+IKH+AASP LLQHTGRAVVFE++EDM R+D Sbjct: 361 DVIRSHDNPIRGEGGLAVLHGNLAPRGALIKHAAASPGLLQHTGRAVVFETLEDMARRID 420 Query: 421 DPALDVTADDVLVLRNAGPKGAPGMPEAGYLPIPKKLARAGVKDMVRISD 470 DP LDV ADDVLVLRNAGPKGAPGMPEAGYLPIP KLARAGVKDMVRISD Sbjct: 421 DPDLDVAADDVLVLRNAGPKGAPGMPEAGYLPIPLKLARAGVKDMVRISD 470