BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0017.p (194 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769468.1| hypothetical protein blr2828 [Bradyrhizobium ja... 330 7e-89 ref|ZP_01227249.1| hypothetical protein SI859A1_01370 [Aurantimo... 72 3e-11 ref|ZP_08678125.1| TRAP dicarboxylate transporter [Sporosarcina ... 67 1e-09 ref|YP_520488.1| hypothetical protein DSY4255 [Desulfitobacteriu... 63 2e-08 ref|ZP_02187812.1| TRAP transporter, DctQ-like membrane protein,... 63 3e-08 >ref|NP_769468.1| hypothetical protein blr2828 [Bradyrhizobium japonicum USDA 110] dbj|BAC48093.1| blr2828 [Bradyrhizobium japonicum USDA 110] Length = 192 Score = 330 bits (846), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 160/194 (82%), Positives = 175/194 (90%), Gaps = 2/194 (1%) Query: 1 MAIADTLVLQRQRHLKWRALDRLELILMMLCGLLCFGFSLSVTADIVTRTIGHPWLWLQE 60 MAIAD L++QRQRHLKWR LD LEL LM+LCG+LCFGFSLSVTADIVTRTIGHPWLWLQE Sbjct: 1 MAIADKLLVQRQRHLKWRGLDWLELALMILCGVLCFGFSLSVTADIVTRTIGHPWLWLQE 60 Query: 61 VTSTLFIYAIFIGAAVATRRNDHLYLTAISEALHGRSRLLVEIVIRLVVLGVALCLVWYG 120 VTSTLFIYAIF+G A ATRRNDHLYLTAISEA+HG RL+VE++IRLVVLGVA CL+WYG Sbjct: 61 VTSTLFIYAIFVGTAAATRRNDHLYLTAISEAMHGTPRLIVEVIIRLVVLGVAFCLIWYG 120 Query: 121 YQNYLRGFGSFRLPSGTPIASLYAVIPLSGILIGLFTIEQLVNGIRNGFDHPEPPDDDLP 180 YQNYLRGFGSFRLPSGTPIASLYA+IPLSG+LIGLFTIEQLVNG+RNGFDHPEPPD+D Sbjct: 121 YQNYLRGFGSFRLPSGTPIASLYAIIPLSGVLIGLFTIEQLVNGLRNGFDHPEPPDED-A 179 Query: 181 IPAIDTRATTGVQP 194 P + T A QP Sbjct: 180 APGL-TEAQMRAQP 192 >ref|ZP_01227249.1| hypothetical protein SI859A1_01370 [Aurantimonas manganoxydans SI85-9A1] gb|EAS50017.1| hypothetical protein SI859A1_01370 [Aurantimonas manganoxydans SI85-9A1] Length = 159 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 1/151 (0%) Query: 18 RALDRLELILMMLCGLLCFGFSLSVTADIVTRTIGHP-WLWLQEVTSTLFIYAIFIGAAV 76 R LD + L+L + GLL G + VT +++R+ P ++W +E+ F++ I IGA Sbjct: 3 RILDAVHLVLKVALGLLVAGLIIPVTMQVLSRSDYVPRYIWTEEIARFCFVWMIMIGAMC 62 Query: 77 ATRRNDHLYLTAISEALHGRSRLLVEIVIRLVVLGVALCLVWYGYQNYLRGFGSFRLPSG 136 A R H L + E+ + + I + L+V VA+ VWYG+Q L G+ + Sbjct: 63 AVRDGTHFDLEILPESANPKIERAKRIFVHLMVSLVAVVFVWYGWQFLLFGWYQTSEIAS 122 Query: 137 TPIASLYAVIPLSGILIGLFTIEQLVNGIRN 167 P+ ++ PL G++ LF E+++ +R Sbjct: 123 LPMNWMFVAWPLMGVVTLLFMAEKVMIELRR 153 >ref|ZP_08678125.1| TRAP dicarboxylate transporter [Sporosarcina newyorkensis 2681] gb|EGQ26933.1| TRAP dicarboxylate transporter [Sporosarcina newyorkensis 2681] Length = 165 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 16/164 (9%) Query: 17 WRALDRLELILMMLCGLLCFGFSLSVTADIVTRT-IGHPWLWLQEVTSTLFIYAIFIGAA 75 WRA++ + G+ FG + +V R P W++EV + I+ +F+G + Sbjct: 8 WRAVEEIS------AGVFFFGGITLIFYGVVMRYGFNSPKAWVEEVVRYVIIWGVFLGFS 61 Query: 76 VATRRNDHLYLTAISEALHGRSRLLVEIVIRLVVLGVALCLVWYGY----QNYLRGFGSF 131 +A R N H+ + + + + G+ + V++ LV + L +YGY Y G S Sbjct: 62 IALRHNQHIQVDLLYDKMPGKMKKFVDLFATLVSIFFCLAYTYYGYVLVEARYHSGMVS- 120 Query: 132 RLPSGTPIASLYAVIPLSGILIGLFTIEQLVNGIRN---GFDHP 172 L G P+ +Y ++P+SG+L L IE+LV +R +D+P Sbjct: 121 -LDVGIPMWIVYLILPISGVLFTLRFIERLVQLVRGKDVKYDNP 163 >ref|YP_520488.1| hypothetical protein DSY4255 [Desulfitobacterium hafniense Y51] ref|YP_002457564.1| tripartite ATP-independent periplasmic transporter DctQ component [Desulfitobacterium hafniense DCB-2] dbj|BAE86044.1| hypothetical protein [Desulfitobacterium hafniense Y51] gb|ACL19128.1| Tripartite ATP-independent periplasmic transporter DctQ component [Desulfitobacterium hafniense DCB-2] Length = 177 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 4/154 (2%) Query: 17 WRALDRLELILMMLCGLLCFGFSLSVTADIVTRTIGHPWLWLQEVTSTLFIYAIFIGAAV 76 WRA + LE IL GLL G ++ I+ P W+ E++ L I+ IGA+V Sbjct: 5 WRAFNFLEDILA--GGLLFIGVTVIFYGVIMRYFFNDPQPWVDEISQWLIIWGTLIGASV 62 Query: 77 ATRRNDHLYLTAISEALHGRSRLLVEIVIRLVVLGVALCLVWYGYQ--NYLRGFGSFRLP 134 A R N H+ + + + L R R +V I +V L + ++ YG++ ++ G Sbjct: 63 ALRNNHHISVEMLYDRLPLRGRFMVTIFAHMVGLLFGIFVLRYGFELVAFVHKTGQKSTD 122 Query: 135 SGTPIASLYAVIPLSGILIGLFTIEQLVNGIRNG 168 +G + +Y ++PL G L+ + + +L ++NG Sbjct: 123 TGIFLYIVYFILPLMGALLSMRFVVKLYETLKNG 156 >ref|ZP_02187812.1| TRAP transporter, DctQ-like membrane protein, putative [alpha proteobacterium BAL199] gb|EDP65466.1| TRAP transporter, DctQ-like membrane protein, putative [alpha proteobacterium BAL199] Length = 172 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 10/156 (6%) Query: 18 RALDRLELILMMLCGLLCFGFSLSVTADIVTRTIGH--PWLWLQEVTSTLFIYAIFIGAA 75 R LD ++ ++ + L + VT I+ R I ++W +EV F++ I +GA Sbjct: 7 RVLDWIDRVMRVAITALITLLIVPVTLQILARYIDFVPRYIWTEEVARFCFVWIIMLGAM 66 Query: 76 VATRRNDHLYLTAI----SEALHGRSRLLVEIVIRLVVLGVALCLVWYGYQNYLRGFGSF 131 +A R H + + + A G RL+V +++ L +ALC VWYG Q G Sbjct: 67 IAVRDESHFDVDVLPHPRTTAGEGWQRLVVHVIM----LALALCFVWYGKQFADEGLLQS 122 Query: 132 RLPSGTPIASLYAVIPLSGILIGLFTIEQLVNGIRN 167 + P+ ++Y P++G++ LF IE+L I Sbjct: 123 SEIADLPMITIYIAWPMAGVVWTLFLIEKLAVDIAK 158